RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN12, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN12	YFR052W	SIS2	P36024	562 aa		5.76	□□□□□ -1.49
RPN12	YFR052W	LDH1	P38139	375 aa		5.76	□□□□□ -1.49
RPN12	YFR052W	RPN10	P38886	268 aa	Known RBP	5.76	□□□□□ -1.49
RPN12	YFR052W	MXR1	P40029	184 aa		5.76	□□□□□ -1.49
RPN12	YFR052W	YJR107W	P47145	328 aa		5.76	□□□□□ -1.49
RPN12	YFR052W	CTF18	P49956	741 aa		5.76	□□□□□ -1.49
RPN12	YFR052W	YKE2	P52553	114 aa		5.76	□□□□□ -1.49
RPN12	YFR052W	YNL108C	P53929	270 aa		5.76	□□□□□ -1.49
RPN12	YFR052W	YAF9	P53930	226 aa		5.76	□□□□□ -1.49
RPN12	YFR052W	YMR321C	Q04898	105 aa		5.76	□□□□□ -1.49
RPN12	YFR052W	YDR341C	Q05506	607 aa	Known RBP	5.76	□□□□□ -1.49
RPN12	YFR052W	SMD2	Q06217	110 aa	Known RBP	5.76	□□□□□ -1.49
RPN12	YFR052W	RLF2	Q12495	606 aa		5.76	□□□□□ -1.49
RPN12	YFR052W	RNR2	P09938	399 aa	Known RBP	5.75	□□□□□ -1.49
RPN12	YFR052W	MATALPHA2	P0CY08	210 aa		5.75	□□□□□ -1.49
RPN12	YFR052W	HMLALPHA2	P0CY09	210 aa		5.75	□□□□□ -1.49
RPN12	YFR052W	RPL8A	P17076	256 aa	Known RBP	5.75	□□□□□ -1.49
RPN12	YFR052W	VPS1	P21576	704 aa	Known RBP	5.75	□□□□□ -1.49
RPN12	YFR052W	TKL1	P23254	680 aa	Known RBP	5.75	□□□□□ -1.49
RPN12	YFR052W	UGA4	P32837	571 aa		5.75	□□□□□ -1.49
RPN12	YFR052W	KTR2	P33550	425 aa		5.75	□□□□□ -1.49
RPN12	YFR052W	DBP7	P36120	742 aa	Known RBP	5.75	□□□□□ -1.49
RPN12	YFR052W	RXT2	P38255	430 aa		5.75	□□□□□ -1.49
RPN12	YFR052W	TOM71	P38825	639 aa	Known RBP	5.75	□□□□□ -1.49
RPN12	YFR052W	PCI8	P40512	444 aa		5.75	□□□□□ -1.49
RPN12	YFR052W	LIF1	P53150	421 aa		5.75	□□□□□ -1.49
RPN12	YFR052W	GUD1	Q07729	489 aa		5.75	□□□□□ -1.49
RPN12	YFR052W	ENO2	P00925	437 aa	Known RBP	5.74	□□□□□ -1.49
RPN12	YFR052W	TIF1	P10081	395 aa	Known RBP	5.74	□□□□□ -1.49
RPN12	YFR052W	POX1	P13711	748 aa		5.74	□□□□□ -1.49
RPN12	YFR052W	UIP5	P36137	443 aa		5.74	□□□□□ -1.49
RPN12	YFR052W	SUL1	P38359	859 aa		5.74	□□□□□ -1.49
RPN12	YFR052W	PAN5	P38787	379 aa		5.74	□□□□□ -1.49
RPN12	YFR052W	TPM2	P40414	161 aa		5.74	□□□□□ -1.49
RPN12	YFR052W	HDA3	Q06623	655 aa		5.74	□□□□□ -1.49
RPN12	YFR052W	YDR215C	Q12240	137 aa		5.74	□□□□□ -1.49
RPN12	YFR052W	RPS31	P05759	152 aa	Known RBP	5.73	□□□□□ -1.49
RPN12	YFR052W	CDC6	P09119	513 aa		5.73	□□□□□ -1.49
RPN12	YFR052W	FPS1	P23900	669 aa		5.73	□□□□□ -1.49
RPN12	YFR052W	PWP2	P25635	923 aa	Known RBP	5.73	□□□□□ -1.49
RPN12	YFR052W	PDC6	P26263	563 aa	Known RBP	5.73	□□□□□ -1.49
RPN12	YFR052W	SEC20	P28791	383 aa		5.73	□□□□□ -1.49
RPN12	YFR052W	MCM4	P30665	933 aa	Known RBP	5.73	□□□□□ -1.49
RPN12	YFR052W	TFC4	P33339	1025 aa		5.73	□□□□□ -1.49
RPN12	YFR052W	BMH2	P34730	273 aa	Known RBP	5.73	□□□□□ -1.49
RPN12	YFR052W	FLR1	P38124	548 aa		5.73	□□□□□ -1.49
RPN12	YFR052W	SOH1	P38633	127 aa		5.73	□□□□□ -1.49
RPN12	YFR052W	KSP1	P38691	1029 aa	Known RBP	5.73	□□□□□ -1.49
RPN12	YFR052W	SKP2	P42843	763 aa		5.73	□□□□□ -1.49
RPN12	YFR052W	CIT3	P43635	486 aa		5.73	□□□□□ -1.49
RPN12	YFR052W	YNR014W	P53719	212 aa		5.73	□□□□□ -1.49
RPN12	YFR052W	PTA1	Q01329	785 aa	Predicted RBP	5.73	□□□□□ -1.49
RPN12	YFR052W	AIM33	Q04516	312 aa		5.73	□□□□□ -1.49
RPN12	YFR052W	MRX10	Q05648	414 aa		5.73	□□□□□ -1.49
RPN12	YFR052W	YPQ2	Q06328	317 aa		5.73	□□□□□ -1.49
RPN12	YFR052W	ISA1	Q07821	250 aa	Predicted RBP	5.73	□□□□□ -1.49
RPN12	YFR052W	MDM20	Q12387	796 aa	Known RBP	5.73	□□□□□ -1.49
RPN12	YFR052W	TRM11	Q12463	433 aa		5.73	□□□□□ -1.49
RPN12	YFR052W	VPS13	Q07878	3144 aa		5.72	□□□□□ -1.49
RPN12	YFR052W	HSP82	P02829	709 aa	Known RBP	5.72	□□□□□ -1.49
RPN12	YFR052W	UBP11	P36026	717 aa		5.72	□□□□□ -1.49
RPN12	YFR052W	MRPL16	P38064	232 aa		5.72	□□□□□ -1.49
RPN12	YFR052W	CCT3	P39077	534 aa	Known RBP	5.72	□□□□□ -1.49
RPN12	YFR052W	NOC2	P39744	710 aa	Known RBP	5.72	□□□□□ -1.49
RPN12	YFR052W	ALA1	P40825	983 aa	Known RBP	5.72	□□□□□ -1.49
RPN12	YFR052W	VPS53	P47061	822 aa		5.72	□□□□□ -1.49
RPN12	YFR052W	RPS7B	P48164	190 aa	Known RBP	5.72	□□□□□ -1.49
RPN12	YFR052W	RIM21	P48565	533 aa		5.72	□□□□□ -1.49
RPN12	YFR052W	YGL138C	P53122	345 aa		5.72	□□□□□ -1.49
RPN12	YFR052W	GDE1	Q02979	1223 aa		5.72	□□□□□ -1.49
RPN12	YFR052W	VPS20	Q04272	221 aa		5.72	□□□□□ -1.49
RPN12	YFR052W	YLR407W	Q06070	228 aa		5.72	□□□□□ -1.49
RPN12	YFR052W	WHI4	Q07655	649 aa	Known RBP	5.72	□□□□□ -1.49
RPN12	YFR052W	ARP6	Q12509	438 aa		5.72	□□□□□ -1.49
RPN12	YFR052W	SBP1	P10080	294 aa	Known RBP	5.71	□□□□□ -1.5
RPN12	YFR052W	MAS2	P11914	482 aa		5.71	□□□□□ -1.5
RPN12	YFR052W	BUD6	P41697	788 aa		5.71	□□□□□ -1.5
RPN12	YFR052W	NPA3	P47122	385 aa		5.71	□□□□□ -1.5
RPN12	YFR052W	DSE4	P53753	1117 aa		5.71	□□□□□ -1.5
RPN12	YFR052W	BNI5	P53890	448 aa	Known RBP	5.71	□□□□□ -1.5
RPN12	YFR052W	ORC4	P54791	529 aa		5.71	□□□□□ -1.5
RPN12	YFR052W	ILV1	P00927	576 aa	Known RBP	5.7	□□□□□ -1.5
RPN12	YFR052W	CPA2	P03965	1118 aa	Known RBP	5.7	□□□□□ -1.5
RPN12	YFR052W	SES1	P07284	462 aa	Known RBP	5.7	□□□□□ -1.5
RPN12	YFR052W	RPL19A	P0CX82	189 aa	Known RBP	5.7	□□□□□ -1.5
RPN12	YFR052W	RPL19B	P0CX83	189 aa	Predicted RBP	5.7	□□□□□ -1.5
RPN12	YFR052W	PDC5	P16467	563 aa	Known RBP	5.7	□□□□□ -1.5
RPN12	YFR052W	KNS1	P32350	737 aa	Predicted RBP	5.7	□□□□□ -1.5
RPN12	YFR052W	SEC8	P32855	1065 aa		5.7	□□□□□ -1.5
RPN12	YFR052W	SAS3	P34218	831 aa		5.7	□□□□□ -1.5
RPN12	YFR052W	ISW1	P38144	1129 aa		5.7	□□□□□ -1.5
RPN12	YFR052W	OPY1	P38271	328 aa		5.7	□□□□□ -1.5
RPN12	YFR052W	AMN1	P38285	549 aa	Predicted RBP	5.7	□□□□□ -1.5
RPN12	YFR052W	YHL017W	P38745	532 aa		5.7	□□□□□ -1.5
RPN12	YFR052W	GAA1	P39012	614 aa		5.7	□□□□□ -1.5
RPN12	YFR052W	AIM21	P40563	679 aa		5.7	□□□□□ -1.5
RPN12	YFR052W	DAK1	P54838	584 aa	Known RBP	5.7	□□□□□ -1.5
RPN12	YFR052W	VPS72	Q03388	795 aa		5.7	□□□□□ -1.5
RPN12	YFR052W	TY1B-A	O13527	1196 aa	Known RBP	5.69	□□□□□ -1.5
RPN12	YFR052W	CBP3	P21560	335 aa		5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms