RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C YML020WQ03722 664 aa3.24□□□□□ -1.89
PRE4YFR050C GLO4Q12320 285 aa3.24□□□□□ -1.89
PRE4YFR050C MSB2P32334 1306 aa3.23□□□□□ -1.89
PRE4YFR050C FLP1P03870 423 aa3.23□□□□□ -1.89
PRE4YFR050C RSC6P25632 483 aa3.23□□□□□ -1.89
PRE4YFR050C FAA3P39002 694 aa3.23□□□□□ -1.89
PRE4YFR050C KIP3P53086 805 aaKnown RBP3.23□□□□□ -1.89
PRE4YFR050C DNM1P54861 757 aa3.23□□□□□ -1.89
PRE4YFR050C YAT1P80235 687 aa3.23□□□□□ -1.89
PRE4YFR050C HAS1Q03532 505 aaKnown RBP3.23□□□□□ -1.89
PRE4YFR050C GPI13Q07830 1017 aa3.23□□□□□ -1.89
PRE4YFR050C ELG1Q12050 791 aa3.23□□□□□ -1.89
PRE4YFR050C NPR1P22211 790 aa3.22□□□□□ -1.89
PRE4YFR050C MCM5P29496 775 aaKnown RBP3.22□□□□□ -1.89
PRE4YFR050C COQ2P32378 372 aa3.22□□□□□ -1.89
PRE4YFR050C AMN1P38285 549 aaPredicted RBP3.22□□□□□ -1.89
PRE4YFR050C POL5P39985 1022 aaKnown RBP3.22□□□□□ -1.89
PRE4YFR050C ARI1P53111 347 aaKnown RBP3.22□□□□□ -1.89
PRE4YFR050C MON1P53129 644 aa3.22□□□□□ -1.89
PRE4YFR050C ENV11P53246 860 aa3.22□□□□□ -1.89
PRE4YFR050C FAR11P53917 953 aa3.22□□□□□ -1.89
PRE4YFR050C MSH6Q03834 1242 aa3.22□□□□□ -1.89
PRE4YFR050C PMT7Q06644 662 aa3.22□□□□□ -1.89
PRE4YFR050C OXR1Q08952 273 aa3.22□□□□□ -1.89
PRE4YFR050C WHI5Q12416 295 aa3.22□□□□□ -1.89
PRE4YFR050C CMR1Q12510 522 aaKnown RBP3.22□□□□□ -1.89
PRE4YFR050C PUP3P25451 205 aaKnown RBP3.21□□□□□ -1.9
PRE4YFR050C RPS7AP26786 190 aaKnown RBP3.21□□□□□ -1.9
PRE4YFR050C KRE2P27809 442 aa3.21□□□□□ -1.9
PRE4YFR050C MET4P32389 672 aa3.21□□□□□ -1.9
PRE4YFR050C OCT1P35999 772 aa3.21□□□□□ -1.9
PRE4YFR050C RIM11P38615 370 aa3.21□□□□□ -1.9
PRE4YFR050C STB5P38699 743 aa3.21□□□□□ -1.9
PRE4YFR050C RVS167P39743 482 aaKnown RBP3.21□□□□□ -1.9
PRE4YFR050C NUT1P53114 1132 aa3.21□□□□□ -1.9
PRE4YFR050C YLL054CQ12244 843 aa3.21□□□□□ -1.9
PRE4YFR050C TY1A-NL1Q12391 440 aaKnown RBP3.21□□□□□ -1.9
PRE4YFR050C ADR1P07248 1323 aa3.2□□□□□ -1.9
PRE4YFR050C RTC1Q08281 1341 aa3.2□□□□□ -1.9
PRE4YFR050C PHO4P07270 312 aaKnown RBP3.2□□□□□ -1.9
PRE4YFR050C POL3P15436 1097 aa3.2□□□□□ -1.9
PRE4YFR050C KAR2P16474 682 aaKnown RBP3.2□□□□□ -1.9
PRE4YFR050C ERS1P17261 260 aa3.2□□□□□ -1.9
PRE4YFR050C MBR1P23493 339 aa3.2□□□□□ -1.9
PRE4YFR050C RPT1P33299 467 aaKnown RBP3.2□□□□□ -1.9
PRE4YFR050C VPS35P34110 944 aa3.2□□□□□ -1.9
PRE4YFR050C CRP1P38845 465 aaKnown RBP3.2□□□□□ -1.9
PRE4YFR050C SHU2P38957 223 aa3.2□□□□□ -1.9
PRE4YFR050C AKR1P39010 764 aa3.2□□□□□ -1.9
PRE4YFR050C NOC2P39744 710 aaKnown RBP3.2□□□□□ -1.9
PRE4YFR050C SKP2P42843 763 aa3.2□□□□□ -1.9
PRE4YFR050C PRP42Q03776 544 aaKnown RBP3.2□□□□□ -1.9
PRE4YFR050C YCS4Q06156 1176 aa3.2□□□□□ -1.9
PRE4YFR050C YIG1Q08956 461 aa3.2□□□□□ -1.9
PRE4YFR050C HTS1P07263 546 aaKnown RBP3.19□□□□□ -1.9
PRE4YFR050C RPL43AP0CX25 92 aaKnown RBP3.19□□□□□ -1.9
PRE4YFR050C RPL43BP0CX26 92 aa3.19□□□□□ -1.9
PRE4YFR050C DUR3P33413 735 aa3.19□□□□□ -1.9
PRE4YFR050C SQT1P35184 431 aa3.19□□□□□ -1.9
PRE4YFR050C YKL077WP36081 392 aa3.19□□□□□ -1.9
PRE4YFR050C POA1P38218 177 aa3.19□□□□□ -1.9
PRE4YFR050C MGE1P38523 228 aa3.19□□□□□ -1.9
PRE4YFR050C OCA5P38738 679 aa3.19□□□□□ -1.9
PRE4YFR050C DAK2P43550 591 aa3.19□□□□□ -1.9
PRE4YFR050C RSM26P47141 266 aa3.19□□□□□ -1.9
PRE4YFR050C GCV1P48015 400 aa3.19□□□□□ -1.9
PRE4YFR050C MET13P53128 600 aa3.19□□□□□ -1.9
PRE4YFR050C YAF9P53930 226 aa3.19□□□□□ -1.9
PRE4YFR050C DAL4Q04895 635 aa3.19□□□□□ -1.9
PRE4YFR050C HCR1Q05775 265 aaKnown RBP3.19□□□□□ -1.9
PRE4YFR050C YOR223WQ12015 292 aa3.19□□□□□ -1.9
PRE4YFR050C FKS1P38631 1876 aaKnown RBP3.19□□□□□ -1.9
PRE4YFR050C CHS2P14180 963 aa3.18□□□□□ -1.9
PRE4YFR050C KAE1P36132 386 aa3.18□□□□□ -1.9
PRE4YFR050C ATG14P38270 344 aa3.18□□□□□ -1.9
PRE4YFR050C CHS7P38843 316 aa3.18□□□□□ -1.9
PRE4YFR050C SDS3P40505 327 aa3.18□□□□□ -1.9
PRE4YFR050C POL32P47110 350 aa3.18□□□□□ -1.9
PRE4YFR050C FAA4P47912 694 aaKnown RBP3.18□□□□□ -1.9
PRE4YFR050C TOS4Q06266 489 aa3.18□□□□□ -1.9
PRE4YFR050C REC8Q12188 680 aa3.18□□□□□ -1.9
PRE4YFR050C SEC15P22224 910 aa3.17□□□□□ -1.9
PRE4YFR050C NAM7P30771 971 aaKnown RBP3.17□□□□□ -1.9
PRE4YFR050C REI1P38344 393 aaPredicted RBP3.17□□□□□ -1.9
PRE4YFR050C SAF1P38352 637 aa3.17□□□□□ -1.9
PRE4YFR050C NCE103P53615 221 aa3.17□□□□□ -1.9
PRE4YFR050C PEX13P80667 386 aa3.17□□□□□ -1.9
PRE4YFR050C DOT1Q04089 582 aaKnown RBP3.17□□□□□ -1.9
PRE4YFR050C GUD1Q07729 489 aa3.17□□□□□ -1.9
PRE4YFR050C NOP8Q08287 484 aaPredicted RBP3.17□□□□□ -1.9
PRE4YFR050C POL2P21951 2222 aaKnown RBP3.17□□□□□ -1.9
PRE4YFR050C NUP145P49687 1317 aa3.17□□□□□ -1.9
PRE4YFR050C PCK1P10963 549 aa3.16□□□□□ -1.9
PRE4YFR050C RAD53P22216 821 aa3.16□□□□□ -1.9
PRE4YFR050C HEM3P28789 327 aa3.16□□□□□ -1.9
PRE4YFR050C ASF1P32447 279 aa3.16□□□□□ -1.9
PRE4YFR050C LEU5P38702 357 aa3.16□□□□□ -1.9
PRE4YFR050C RMT2Q03305 412 aa3.16□□□□□ -1.9
PRE4YFR050C GIC2Q06648 383 aa3.16□□□□□ -1.9
PRE4YFR050C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms