RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W WHI4Q07655 649 aaKnown RBP3.12□□□□□ -1.91
YCK3YER123W TDP1P38319 544 aa3.11□□□□□ -1.91
YCK3YER123W YHL017WP38745 532 aa3.11□□□□□ -1.91
YCK3YER123W TRM13Q12383 476 aa3.11□□□□□ -1.91
YCK3YER123W RPT1P33299 467 aaKnown RBP3.1□□□□□ -1.91
YCK3YER123W PPX1P38698 397 aa3.1□□□□□ -1.91
YCK3YER123W TIF35Q04067 274 aaKnown RBP3.1□□□□□ -1.91
YCK3YER123W UPC2Q12151 913 aa3.1□□□□□ -1.91
YCK3YER123W SSA1P10591 642 aaKnown RBP3.09□□□□□ -1.91
YCK3YER123W HCA4P20448 770 aaKnown RBP3.09□□□□□ -1.91
YCK3YER123W YGR122WP53272 402 aa3.09□□□□□ -1.91
YCK3YER123W YLL058WQ12198 575 aa3.09□□□□□ -1.91
YCK3YER123W THI7Q05998 598 aa3.08□□□□□ -1.92
YCK3YER123W FUN30P31380 1131 aa3.08□□□□□ -1.92
YCK3YER123W FLO10P36170 1169 aa3.08□□□□□ -1.92
YCK3YER123W PPS1P38148 807 aa3.08□□□□□ -1.92
YCK3YER123W TAH11P47112 604 aa3.08□□□□□ -1.92
YCK3YER123W MDM38Q08179 573 aa3.08□□□□□ -1.92
YCK3YER123W FRE5Q08908 694 aa3.08□□□□□ -1.92
YCK3YER123W GCR1P07261 785 aa3.07□□□□□ -1.92
YCK3YER123W SED4P25365 1065 aa3.07□□□□□ -1.92
YCK3YER123W ERG5P54781 538 aa3.07□□□□□ -1.92
YCK3YER123W SRT1Q03175 343 aa3.07□□□□□ -1.92
YCK3YER123W RER2P35196 286 aa3.06□□□□□ -1.92
YCK3YER123W SCS3P53012 380 aa3.06□□□□□ -1.92
YCK3YER123W VPS73P53142 486 aaKnown RBP3.06□□□□□ -1.92
YCK3YER123W ARO10Q06408 635 aa3.06□□□□□ -1.92
YCK3YER123W RAD2P07276 1031 aa3.05□□□□□ -1.92
YCK3YER123W CDC43P18898 376 aa3.05□□□□□ -1.92
YCK3YER123W STE14P32584 239 aa3.05□□□□□ -1.92
YCK3YER123W RLF2Q12495 606 aa3.05□□□□□ -1.92
YCK3YER123W MET3P08536 511 aa3.04□□□□□ -1.92
YCK3YER123W RAD27P26793 382 aa3.04□□□□□ -1.92
YCK3YER123W YIL166CP40445 542 aa3.04□□□□□ -1.92
YCK3YER123W SLU7Q02775 382 aaKnown RBP3.04□□□□□ -1.92
YCK3YER123W YKL151CP36059 337 aa3.04□□□□□ -1.92
YCK3YER123W GIC1P38785 314 aa3.04□□□□□ -1.92
YCK3YER123W THI12P42883 340 aa3.04□□□□□ -1.92
YCK3YER123W THI5P43534 340 aa3.04□□□□□ -1.92
YCK3YER123W THI11P47183 340 aa3.04□□□□□ -1.92
YCK3YER123W HRQ1Q05549 1077 aa3.04□□□□□ -1.92
YCK3YER123W THI13Q07748 340 aa3.04□□□□□ -1.92
YCK3YER123W WHI5Q12416 295 aa3.04□□□□□ -1.92
YCK3YER123W MET6P05694 767 aaKnown RBP3.03□□□□□ -1.92
YCK3YER123W RPC82P32349 654 aa3.03□□□□□ -1.92
YCK3YER123W DLT1Q04216 342 aa3.03□□□□□ -1.92
YCK3YER123W ADY4Q05955 493 aa3.03□□□□□ -1.92
YCK3YER123W CYC8P14922 966 aa3.02□□□□□ -1.93
YCK3YER123W YUR1P26725 428 aa3.02□□□□□ -1.93
YCK3YER123W ELO3P40319 345 aa3.02□□□□□ -1.93
YCK3YER123W PEX19Q07418 342 aa3.02□□□□□ -1.93
YCK3YER123W MSC6Q08818 692 aaKnown RBP3.02□□□□□ -1.93
YCK3YER123W ADY2P25613 283 aa3.01□□□□□ -1.93
YCK3YER123W KIN3P22209 435 aa3□□□□□ -1.93
YCK3YER123W CTF13P35203 478 aa3□□□□□ -1.93
YCK3YER123W STM1P39015 273 aaKnown RBP3□□□□□ -1.93
YCK3YER123W CAF20P12962 161 aaKnown RBP2.99□□□□□ -1.93
YCK3YER123W RPS26AP39938 119 aaKnown RBP2.99□□□□□ -1.93
YCK3YER123W RPS26BP39939 119 aaKnown RBP2.99□□□□□ -1.93
YCK3YER123W GAT1P43574 510 aa2.99□□□□□ -1.93
YCK3YER123W RAI1P53063 387 aaKnown RBP2.99□□□□□ -1.93
YCK3YER123W RTT10Q08924 1013 aa2.99□□□□□ -1.93
YCK3YER123W SEC21P32074 935 aaKnown RBP2.98□□□□□ -1.93
YCK3YER123W PCL5P38794 229 aa2.98□□□□□ -1.93
YCK3YER123W SFB2P53953 876 aa2.98□□□□□ -1.93
YCK3YER123W TMA46Q12000 345 aaKnown RBP2.98□□□□□ -1.93
YCK3YER123W TRM11Q12463 433 aa2.98□□□□□ -1.93
YCK3YER123W RKM4Q12504 494 aa2.98□□□□□ -1.93
YCK3YER123W LYP1P32487 611 aa2.97□□□□□ -1.93
YCK3YER123W SAH1P39954 449 aaKnown RBP2.97□□□□□ -1.93
YCK3YER123W NPP2P39997 493 aa2.97□□□□□ -1.93
YCK3YER123W YPL066WQ12194 479 aa2.97□□□□□ -1.93
YCK3YER123W ORC2P32833 620 aa2.96□□□□□ -1.94
YCK3YER123W PUS2P53167 370 aa2.96□□□□□ -1.94
YCK3YER123W RIA1P53893 1110 aa2.96□□□□□ -1.94
YCK3YER123W INO1P11986 533 aa2.95□□□□□ -1.94
YCK3YER123W DMC1P25453 334 aa2.95□□□□□ -1.94
YCK3YER123W RGT1P32862 1170 aa2.95□□□□□ -1.94
YCK3YER123W YKL107WP34251 309 aa2.95□□□□□ -1.94
YCK3YER123W STB2P46679 850 aa2.95□□□□□ -1.94
YCK3YER123W APM1Q00776 475 aaPredicted RBP2.95□□□□□ -1.94
YCK3YER123W MRI1Q06489 411 aaKnown RBP2.95□□□□□ -1.94
YCK3YER123W YPR196WQ06595 470 aa2.95□□□□□ -1.94
YCK3YER123W TRP2P00899 507 aaKnown RBP2.95□□□□□ -1.94
YCK3YER123W YGL176CP46945 554 aa2.95□□□□□ -1.94
YCK3YER123W CRR1Q05790 422 aa2.95□□□□□ -1.94
YCK3YER123W SPO11P23179 398 aa2.94□□□□□ -1.94
YCK3YER123W MOT2P34909 587 aaKnown RBP2.94□□□□□ -1.94
YCK3YER123W MUP1P50276 574 aa2.94□□□□□ -1.94
YCK3YER123W SWM1Q12379 170 aa2.94□□□□□ -1.94
YCK3YER123W SNF7P39929 240 aaKnown RBP2.93□□□□□ -1.94
YCK3YER123W SDP1P40479 209 aa2.93□□□□□ -1.94
YCK3YER123W YJL163CP46996 555 aa2.93□□□□□ -1.94
YCK3YER123W DAM1P53267 343 aa2.93□□□□□ -1.94
YCK3YER123W SRP1Q02821 542 aaKnown RBP2.93□□□□□ -1.94
YCK3YER123W SSF1P38789 453 aaPredicted RBP2.92□□□□□ -1.94
YCK3YER123W FKH2P41813 862 aa2.92□□□□□ -1.94
YCK3YER123W GYP7P48365 746 aa2.92□□□□□ -1.94
YCK3YER123W FBP1P09201 348 aa2.91□□□□□ -1.94
YCK3YER123W TUB3P09734 445 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 168.4 ms