RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W GYP7P48365 746 aa6.12□□□□□ -1.43
UBC6YER100W HRQ1Q05549 1077 aa6.12□□□□□ -1.43
UBC6YER100W GUD1Q07729 489 aa6.12□□□□□ -1.43
UBC6YER100W HRK1Q08732 759 aaKnown RBP6.12□□□□□ -1.43
UBC6YER100W TY4B-PA0A0B7P3V8 1104 aa6.11□□□□□ -1.43
UBC6YER100W PDC5P16467 563 aaKnown RBP6.11□□□□□ -1.43
UBC6YER100W NAR1P23503 491 aaKnown RBP6.11□□□□□ -1.43
UBC6YER100W NPP1P25353 742 aa6.11□□□□□ -1.43
UBC6YER100W PRO1P32264 428 aa6.11□□□□□ -1.43
UBC6YER100W HOG1P32485 435 aa6.11□□□□□ -1.43
UBC6YER100W PRP19P32523 503 aaKnown RBP6.11□□□□□ -1.43
UBC6YER100W MAE1P36013 669 aaKnown RBP6.11□□□□□ -1.43
UBC6YER100W MCD4P36051 919 aa6.11□□□□□ -1.43
UBC6YER100W TSL1P38427 1098 aaKnown RBP6.11□□□□□ -1.43
UBC6YER100W OAF1P39720 1047 aaPredicted RBP6.11□□□□□ -1.43
UBC6YER100W MXR1P40029 184 aa6.11□□□□□ -1.43
UBC6YER100W NIT3P49954 291 aa6.11□□□□□ -1.43
UBC6YER100W KIP3P53086 805 aaKnown RBP6.11□□□□□ -1.43
UBC6YER100W MET14Q02196 202 aa6.11□□□□□ -1.43
UBC6YER100W SVL3Q03088 825 aaKnown RBP6.11□□□□□ -1.43
UBC6YER100W YMR074CQ04773 145 aa6.11□□□□□ -1.43
UBC6YER100W ALG6Q12001 544 aaKnown RBP6.11□□□□□ -1.43
UBC6YER100W ENV7Q12003 364 aa6.11□□□□□ -1.43
UBC6YER100W YOR223WQ12015 292 aa6.11□□□□□ -1.43
UBC6YER100W RRP6Q12149 733 aaKnown RBP6.11□□□□□ -1.43
UBC6YER100W TY4A-HQ6Q5P6 413 aa6.11□□□□□ -1.43
UBC6YER100W MPD2Q99316 277 aa6.11□□□□□ -1.43
UBC6YER100W YEF3P16521 1044 aaKnown RBP6.1□□□□□ -1.43
UBC6YER100W ERS1P17261 260 aa6.1□□□□□ -1.43
UBC6YER100W TFC4P33339 1025 aa6.1□□□□□ -1.43
UBC6YER100W HSP78P33416 811 aa6.1□□□□□ -1.43
UBC6YER100W CEM1P39525 442 aa6.1□□□□□ -1.43
UBC6YER100W TED1P40533 473 aa6.1□□□□□ -1.43
UBC6YER100W MNN11P46985 422 aaKnown RBP6.1□□□□□ -1.43
UBC6YER100W YKE2P52553 114 aa6.1□□□□□ -1.43
UBC6YER100W PAP2P53632 584 aaKnown RBP6.1□□□□□ -1.43
UBC6YER100W ELA1P53861 379 aaPredicted RBP6.1□□□□□ -1.43
UBC6YER100W YLR257WQ06146 321 aaKnown RBP6.1□□□□□ -1.43
UBC6YER100W ATG33Q06485 197 aa6.1□□□□□ -1.43
UBC6YER100W REH1Q06709 432 aa6.1□□□□□ -1.43
UBC6YER100W MET7Q08645 548 aa6.1□□□□□ -1.43
UBC6YER100W PTP2P29461 750 aa6.09□□□□□ -1.43
UBC6YER100W SMY2P32909 740 aaKnown RBP6.09□□□□□ -1.43
UBC6YER100W RRP8P38961 392 aaKnown RBP6.09□□□□□ -1.43
UBC6YER100W GPP2P40106 250 aaKnown RBP6.09□□□□□ -1.43
UBC6YER100W DSE4P53753 1117 aa6.09□□□□□ -1.43
UBC6YER100W HOS3Q02959 697 aaKnown RBP6.09□□□□□ -1.43
UBC6YER100W YDR514CQ04408 483 aa6.09□□□□□ -1.43
UBC6YER100W GAL1P04385 528 aa6.08□□□□□ -1.44
UBC6YER100W PTH2P34222 208 aa6.08□□□□□ -1.44
UBC6YER100W DID4P36108 232 aa6.08□□□□□ -1.44
UBC6YER100W ERT1P38140 529 aa6.08□□□□□ -1.44
UBC6YER100W CCT5P40413 562 aaKnown RBP6.08□□□□□ -1.44
UBC6YER100W SPC105P53148 917 aa6.08□□□□□ -1.44
UBC6YER100W DOT1Q04089 582 aaKnown RBP6.08□□□□□ -1.44
UBC6YER100W GUP2Q08929 609 aa6.08□□□□□ -1.44
UBC6YER100W GPM1P00950 247 aaKnown RBP6.07□□□□□ -1.44
UBC6YER100W MPH2P0CD99 609 aa6.07□□□□□ -1.44
UBC6YER100W SNF5P18480 905 aa6.07□□□□□ -1.44
UBC6YER100W CDC48P25694 835 aaKnown RBP6.07□□□□□ -1.44
UBC6YER100W MET22P32179 357 aa6.07□□□□□ -1.44
UBC6YER100W RPC82P32349 654 aa6.07□□□□□ -1.44
UBC6YER100W NIC96P34077 839 aa6.07□□□□□ -1.44
UBC6YER100W UGA2P38067 497 aa6.07□□□□□ -1.44
UBC6YER100W GPB2P39717 880 aa6.07□□□□□ -1.44
UBC6YER100W EMP65P40085 556 aa6.07□□□□□ -1.44
UBC6YER100W TNA1P53322 534 aa6.07□□□□□ -1.44
UBC6YER100W MLC2Q06580 163 aa6.07□□□□□ -1.44
UBC6YER100W PSR2Q07949 397 aa6.07□□□□□ -1.44
UBC6YER100W MDM38Q08179 573 aa6.07□□□□□ -1.44
UBC6YER100W HMG1P12683 1054 aa6.06□□□□□ -1.44
UBC6YER100W YSC84P32793 468 aa6.06□□□□□ -1.44
UBC6YER100W YKL133CP36066 463 aa6.06□□□□□ -1.44
UBC6YER100W RIM4P38741 713 aa6.06□□□□□ -1.44
UBC6YER100W YER158CP40095 573 aa6.06□□□□□ -1.44
UBC6YER100W RSC8P43609 557 aaKnown RBP6.06□□□□□ -1.44
UBC6YER100W YJL045WP47052 634 aa6.06□□□□□ -1.44
UBC6YER100W MTC3P53077 123 aa6.06□□□□□ -1.44
UBC6YER100W NHX1Q04121 633 aa6.06□□□□□ -1.44
UBC6YER100W RMP1Q12530 201 aa6.06□□□□□ -1.44
UBC6YER100W FUN30P31380 1131 aa6.05□□□□□ -1.44
UBC6YER100W HEM12P32347 362 aaPredicted RBP6.05□□□□□ -1.44
UBC6YER100W ERP2P39704 215 aa6.05□□□□□ -1.44
UBC6YER100W RRT14P40470 206 aa6.05□□□□□ -1.44
UBC6YER100W RET2P43621 546 aa6.05□□□□□ -1.44
UBC6YER100W HXT16P47185 567 aa6.05□□□□□ -1.44
UBC6YER100W NCE103P53615 221 aa6.05□□□□□ -1.44
UBC6YER100W SRT1Q03175 343 aa6.05□□□□□ -1.44
UBC6YER100W CCR4P31384 837 aaKnown RBP6.04□□□□□ -1.44
UBC6YER100W MRS6P32864 603 aaKnown RBP6.04□□□□□ -1.44
UBC6YER100W PGM2P37012 569 aaKnown RBP6.04□□□□□ -1.44
UBC6YER100W ALG14P38242 237 aa6.04□□□□□ -1.44
UBC6YER100W RPN10P38886 268 aaKnown RBP6.04□□□□□ -1.44
UBC6YER100W PHM6Q05637 104 aa6.04□□□□□ -1.44
UBC6YER100W APM4Q99186 491 aa6.04□□□□□ -1.44
UBC6YER100W NHA1Q99271 985 aa6.04□□□□□ -1.44
UBC6YER100W BI4P03879 638 aa6.03□□□□□ -1.44
UBC6YER100W KCC4P25389 1037 aa6.03□□□□□ -1.44
UBC6YER100W PER1P25625 357 aa6.03□□□□□ -1.44
UBC6YER100W BIT2P38346 545 aa6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 81.6 ms