RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN3YER021W SLA2P33338 968 aa4.34□□□□□ -1.71
RPN3YER021W MRP8P35719 219 aa4.34□□□□□ -1.71
RPN3YER021W YKL222CP35995 705 aa4.34□□□□□ -1.71
RPN3YER021W YBR184WP38299 523 aa4.34□□□□□ -1.71
RPN3YER021W ACM1Q08981 209 aa4.34□□□□□ -1.71
RPN3YER021W STU1P38198 1513 aa4.34□□□□□ -1.71
RPN3YER021W BUD3P25558 1636 aa4.34□□□□□ -1.71
RPN3YER021W UGA2P38067 497 aa4.33□□□□□ -1.72
RPN3YER021W OCA5P38738 679 aa4.33□□□□□ -1.72
RPN3YER021W GEM1P39722 662 aa4.33□□□□□ -1.72
RPN3YER021W IRR1P40541 1150 aa4.33□□□□□ -1.72
RPN3YER021W NNF1P47149 201 aa4.33□□□□□ -1.72
RPN3YER021W USO1P25386 1790 aa4.33□□□□□ -1.72
RPN3YER021W PBY1P38254 753 aa4.32□□□□□ -1.72
RPN3YER021W PFD1P46988 109 aa4.32□□□□□ -1.72
RPN3YER021W YJL049WP47048 450 aa4.32□□□□□ -1.72
RPN3YER021W NAN1Q02931 896 aaKnown RBP4.32□□□□□ -1.72
RPN3YER021W RSB1Q08417 382 aa4.32□□□□□ -1.72
RPN3YER021W BI4P03879 638 aa4.31□□□□□ -1.72
RPN3YER021W SPS1P08458 490 aa4.31□□□□□ -1.72
RPN3YER021W RAD4P14736 754 aa4.31□□□□□ -1.72
RPN3YER021W POL12P38121 705 aaPredicted RBP4.31□□□□□ -1.72
RPN3YER021W YKL151CP36059 337 aa4.31□□□□□ -1.72
RPN3YER021W ABZ1P37254 787 aaPredicted RBP4.31□□□□□ -1.72
RPN3YER021W NIT1P40447 199 aa4.31□□□□□ -1.72
RPN3YER021W SEC26P41810 973 aaKnown RBP4.31□□□□□ -1.72
RPN3YER021W IOC3P43596 787 aa4.31□□□□□ -1.72
RPN3YER021W TAF1P46677 1066 aa4.31□□□□□ -1.72
RPN3YER021W HRQ1Q05549 1077 aa4.31□□□□□ -1.72
RPN3YER021W ATG13Q06628 738 aa4.3□□□□□ -1.72
RPN3YER021W FMP25Q08023 583 aa4.3□□□□□ -1.72
RPN3YER021W ESC8Q08119 714 aa4.3□□□□□ -1.72
RPN3YER021W SVS1Q12254 260 aa4.3□□□□□ -1.72
RPN3YER021W YOL098CQ12496 1037 aa4.3□□□□□ -1.72
RPN3YER021W DFG16Q99234 619 aa4.3□□□□□ -1.72
RPN3YER021W ACE2P21192 770 aa4.29□□□□□ -1.72
RPN3YER021W RPL8BP29453 256 aaKnown RBP4.29□□□□□ -1.72
RPN3YER021W GUS1P46655 708 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
RPN3YER021W TIM54P47045 478 aa4.29□□□□□ -1.72
RPN3YER021W MTC3P53077 123 aa4.29□□□□□ -1.72
RPN3YER021W HUL5P53119 910 aa4.29□□□□□ -1.72
RPN3YER021W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
RPN3YER021W BDF2Q07442 638 aa4.29□□□□□ -1.72
RPN3YER021W YDL177CQ12257 170 aa4.29□□□□□ -1.72
RPN3YER021W THS1P04801 734 aaKnown RBP4.28□□□□□ -1.72
RPN3YER021W RFC5P38251 354 aa4.28□□□□□ -1.72
RPN3YER021W YHR020WP38708 688 aaKnown RBP4.28□□□□□ -1.72
RPN3YER021W ETP1P38748 585 aaKnown RBP4.28□□□□□ -1.72
RPN3YER021W RRT14P40470 206 aa4.28□□□□□ -1.72
RPN3YER021W ECL1P48235 211 aa4.28□□□□□ -1.72
RPN3YER021W FOL2P51601 243 aaKnown RBP4.28□□□□□ -1.72
RPN3YER021W NSE3Q05541 303 aa4.28□□□□□ -1.72
RPN3YER021W DUS3Q06053 668 aaKnown RBP4.28□□□□□ -1.72
RPN3YER021W YDR306CQ06640 478 aa4.28□□□□□ -1.72
RPN3YER021W RIB2Q12362 591 aaKnown RBP4.28□□□□□ -1.72
RPN3YER021W PRP9P19736 530 aaKnown RBP4.27□□□□□ -1.73
RPN3YER021W CDC12P32468 407 aaKnown RBP4.27□□□□□ -1.73
RPN3YER021W HBS1P32769 611 aaKnown RBP4.27□□□□□ -1.73
RPN3YER021W HFM1P51979 1187 aa4.27□□□□□ -1.73
RPN3YER021W UTP8P53276 713 aaKnown RBP4.27□□□□□ -1.73
RPN3YER021W SPO75Q07798 868 aa4.27□□□□□ -1.73
RPN3YER021W MDM38Q08179 573 aa4.27□□□□□ -1.73
RPN3YER021W YTA7P40340 1379 aa4.27□□□□□ -1.73
RPN3YER021W SAH1P39954 449 aaKnown RBP4.27□□□□□ -1.73
RPN3YER021W ALR2P43553 858 aa4.27□□□□□ -1.73
RPN3YER021W ERP6P53198 216 aa4.27□□□□□ -1.73
RPN3YER021W SRP1Q02821 542 aaKnown RBP4.27□□□□□ -1.73
RPN3YER021W EAF1Q06337 982 aa4.27□□□□□ -1.73
RPN3YER021W UBX5Q06682 500 aa4.27□□□□□ -1.73
RPN3YER021W CDC53Q12018 815 aaKnown RBP4.27□□□□□ -1.73
RPN3YER021W YLL058WQ12198 575 aa4.27□□□□□ -1.73
RPN3YER021W STI1P15705 589 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
RPN3YER021W GAS1P22146 559 aaKnown RBP4.26□□□□□ -1.73
RPN3YER021W GIC1P38785 314 aa4.26□□□□□ -1.73
RPN3YER021W ENV11P53246 860 aa4.26□□□□□ -1.73
RPN3YER021W GIS1Q03833 894 aa4.26□□□□□ -1.73
RPN3YER021W XYL2Q07993 356 aa4.26□□□□□ -1.73
RPN3YER021W OSH2Q12451 1283 aa4.26□□□□□ -1.73
RPN3YER021W NUP157P40064 1391 aaKnown RBP4.26□□□□□ -1.73
RPN3YER021W TY3B-GQ99315 1547 aa4.25□□□□□ -1.73
RPN3YER021W ARE1P25628 610 aa4.25□□□□□ -1.73
RPN3YER021W AFR1P33304 620 aa4.25□□□□□ -1.73
RPN3YER021W SIT1P39980 628 aa4.25□□□□□ -1.73
RPN3YER021W NPP2P39997 493 aa4.25□□□□□ -1.73
RPN3YER021W YGR125WP53273 1036 aa4.25□□□□□ -1.73
RPN3YER021W SRT1Q03175 343 aa4.25□□□□□ -1.73
RPN3YER021W RSM24Q03976 319 aa4.25□□□□□ -1.73
RPN3YER021W FLC1Q08967 793 aa4.25□□□□□ -1.73
RPN3YER021W STH1P32597 1359 aa4.25□□□□□ -1.73
RPN3YER021W CYC1P00044 109 aaPredicted RBP4.24□□□□□ -1.73
RPN3YER021W CIT1P00890 479 aa4.24□□□□□ -1.73
RPN3YER021W HSP60P19882 572 aaKnown RBP4.24□□□□□ -1.73
RPN3YER021W SRM1P21827 482 aa4.24□□□□□ -1.73
RPN3YER021W NPP1P25353 742 aa4.24□□□□□ -1.73
RPN3YER021W APL1P27351 700 aa4.24□□□□□ -1.73
RPN3YER021W PPH3P32345 308 aa4.24□□□□□ -1.73
RPN3YER021W AAR2P32357 355 aaPredicted RBP4.24□□□□□ -1.73
RPN3YER021W SRP40P32583 406 aaPredicted RBP4.24□□□□□ -1.73
RPN3YER021W TSA1P34760 196 aaKnown RBP4.24□□□□□ -1.73
RPN3YER021W GIP4P39732 760 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms