RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W VPS75P53853 264 aa6.73□□□□□ -1.33
RPT3YDR394W EIS1Q05050 843 aaKnown RBP6.73□□□□□ -1.33
RPT3YDR394W UTP4Q06679 776 aaKnown RBP6.73□□□□□ -1.33
RPT3YDR394W KEL3Q08979 651 aaPredicted RBP6.73□□□□□ -1.33
RPT3YDR394W HIS4P00815 799 aaKnown RBP6.72□□□□□ -1.33
RPT3YDR394W PHO13P19881 312 aa6.72□□□□□ -1.33
RPT3YDR394W HIR1P32479 840 aa6.72□□□□□ -1.33
RPT3YDR394W SUV3P32580 737 aa6.72□□□□□ -1.33
RPT3YDR394W SAC6P32599 642 aaKnown RBP6.72□□□□□ -1.33
RPT3YDR394W MFT1P33441 392 aaKnown RBP6.72□□□□□ -1.33
RPT3YDR394W SCD5P34758 872 aa6.72□□□□□ -1.33
RPT3YDR394W SAP190P36123 1033 aa6.72□□□□□ -1.33
RPT3YDR394W TCD1P38756 429 aa6.72□□□□□ -1.33
RPT3YDR394W BCD1P38772 366 aa6.72□□□□□ -1.33
RPT3YDR394W CEP3P40969 608 aa6.72□□□□□ -1.33
RPT3YDR394W RET3P53600 189 aa6.72□□□□□ -1.33
RPT3YDR394W NSG2P53898 299 aa6.72□□□□□ -1.33
RPT3YDR394W YCG1Q06680 1035 aa6.72□□□□□ -1.33
RPT3YDR394W TMA16Q08687 178 aa6.72□□□□□ -1.33
RPT3YDR394W DSE3Q08729 430 aa6.72□□□□□ -1.33
RPT3YDR394W RPS9BP05755 195 aaKnown RBP6.71□□□□□ -1.34
RPT3YDR394W PET111P08468 800 aa6.71□□□□□ -1.34
RPT3YDR394W THR4P16120 514 aaKnown RBP6.71□□□□□ -1.34
RPT3YDR394W SSA4P22202 642 aaKnown RBP6.71□□□□□ -1.34
RPT3YDR394W SEC20P28791 383 aa6.71□□□□□ -1.34
RPT3YDR394W MDJ1P35191 511 aa6.71□□□□□ -1.34
RPT3YDR394W MNR2P35724 969 aa6.71□□□□□ -1.34
RPT3YDR394W CCT3P39077 534 aaKnown RBP6.71□□□□□ -1.34
RPT3YDR394W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
RPT3YDR394W YML083CQ04526 418 aa6.71□□□□□ -1.34
RPT3YDR394W PCL8Q08966 492 aa6.71□□□□□ -1.34
RPT3YDR394W CTT1P06115 562 aa6.7□□□□□ -1.34
RPT3YDR394W SRP54P20424 541 aaKnown RBP6.7□□□□□ -1.34
RPT3YDR394W SRM1P21827 482 aa6.7□□□□□ -1.34
RPT3YDR394W PRE8P23639 250 aa6.7□□□□□ -1.34
RPT3YDR394W CDC15P27636 974 aa6.7□□□□□ -1.34
RPT3YDR394W SAS3P34218 831 aa6.7□□□□□ -1.34
RPT3YDR394W PXL1P36166 706 aa6.7□□□□□ -1.34
RPT3YDR394W STT3P39007 718 aaKnown RBP6.7□□□□□ -1.34
RPT3YDR394W LYS14P40971 790 aa6.7□□□□□ -1.34
RPT3YDR394W GSM1P42950 618 aa6.7□□□□□ -1.34
RPT3YDR394W YFL066CP43538 392 aa6.7□□□□□ -1.34
RPT3YDR394W FOL1P53848 824 aa6.7□□□□□ -1.34
RPT3YDR394W MDM1Q01846 1127 aa6.7□□□□□ -1.34
RPT3YDR394W SKG3Q06315 1026 aa6.7□□□□□ -1.34
RPT3YDR394W GAS5Q08193 484 aa6.7□□□□□ -1.34
RPT3YDR394W NOB1Q08444 459 aaKnown RBP6.7□□□□□ -1.34
RPT3YDR394W AFT2Q08957 416 aa6.7□□□□□ -1.34
RPT3YDR394W RRG1Q12167 365 aaPredicted RBP6.7□□□□□ -1.34
RPT3YDR394W FAS2P19097 1887 aaKnown RBP6.7□□□□□ -1.34
RPT3YDR394W FOB1O13329 566 aa6.69□□□□□ -1.34
RPT3YDR394W GPM1P00950 247 aaKnown RBP6.69□□□□□ -1.34
RPT3YDR394W AI1P03875 834 aa6.69□□□□□ -1.34
RPT3YDR394W NUC1P08466 329 aa6.69□□□□□ -1.34
RPT3YDR394W STI1P15705 589 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
RPT3YDR394W RPS7AP26786 190 aaKnown RBP6.69□□□□□ -1.34
RPT3YDR394W YKU70P32807 602 aa6.69□□□□□ -1.34
RPT3YDR394W MSC7P38694 644 aa6.69□□□□□ -1.34
RPT3YDR394W THI6P41835 540 aa6.69□□□□□ -1.34
RPT3YDR394W VTC2P43585 828 aa6.69□□□□□ -1.34
RPT3YDR394W YGR153WP48238 217 aa6.69□□□□□ -1.34
RPT3YDR394W MTO1P53070 669 aa6.69□□□□□ -1.34
RPT3YDR394W VPS30Q02948 557 aa6.69□□□□□ -1.34
RPT3YDR394W VPS60Q03390 229 aa6.69□□□□□ -1.34
RPT3YDR394W TY1A-DR2Q03964 440 aaKnown RBP6.69□□□□□ -1.34
RPT3YDR394W GIS4Q04233 774 aa6.69□□□□□ -1.34
RPT3YDR394W SFI1Q12369 946 aa6.69□□□□□ -1.34
RPT3YDR394W CKA2P19454 339 aa6.68□□□□□ -1.34
RPT3YDR394W FYV8P46949 817 aaKnown RBP6.68□□□□□ -1.34
RPT3YDR394W ALF1P53904 254 aa6.68□□□□□ -1.34
RPT3YDR394W TRS120Q04183 1289 aa6.68□□□□□ -1.34
RPT3YDR394W COG4Q06096 861 aa6.68□□□□□ -1.34
RPT3YDR394W SLK19Q08581 821 aaKnown RBP6.68□□□□□ -1.34
RPT3YDR394W PMD1P32634 1753 aa6.67□□□□□ -1.34
RPT3YDR394W CDC37P06101 506 aaKnown RBP6.67□□□□□ -1.34
RPT3YDR394W MSH3P25336 1018 aa6.67□□□□□ -1.34
RPT3YDR394W MRC1P25588 1096 aa6.67□□□□□ -1.34
RPT3YDR394W EFM2P38347 419 aa6.67□□□□□ -1.34
RPT3YDR394W YGR237CP50089 785 aa6.67□□□□□ -1.34
RPT3YDR394W SNU71P53207 620 aaKnown RBP6.67□□□□□ -1.34
RPT3YDR394W BNI5P53890 448 aaKnown RBP6.67□□□□□ -1.34
RPT3YDR394W CSM3Q04659 317 aa6.67□□□□□ -1.34
RPT3YDR394W APL4Q12028 832 aa6.67□□□□□ -1.34
RPT3YDR394W TUS1Q06412 1307 aa6.67□□□□□ -1.34
RPT3YDR394W SPO11P23179 398 aa6.66□□□□□ -1.34
RPT3YDR394W SRO9P25567 434 aaKnown RBP6.66□□□□□ -1.34
RPT3YDR394W ICL1P28240 557 aaPredicted RBP6.66□□□□□ -1.34
RPT3YDR394W CHS3P29465 1165 aa6.66□□□□□ -1.34
RPT3YDR394W KAP122P32767 1081 aa6.66□□□□□ -1.34
RPT3YDR394W YET1P35723 206 aa6.66□□□□□ -1.34
RPT3YDR394W CTM1P38818 585 aa6.66□□□□□ -1.34
RPT3YDR394W VPS45P38932 577 aa6.66□□□□□ -1.34
RPT3YDR394W SHC1P39000 512 aa6.66□□□□□ -1.34
RPT3YDR394W CAJ1P39101 391 aa6.66□□□□□ -1.34
RPT3YDR394W AIP1P46680 615 aaKnown RBP6.66□□□□□ -1.34
RPT3YDR394W UBA2P52488 636 aa6.66□□□□□ -1.34
RPT3YDR394W SDA1P53313 767 aaKnown RBP6.66□□□□□ -1.34
RPT3YDR394W KIN4Q01919 800 aa6.66□□□□□ -1.34
RPT3YDR394W EBS1Q03466 884 aaKnown RBP6.66□□□□□ -1.34
RPT3YDR394W CRF1Q04930 467 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 66.1 ms