RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	CDA1	Q06702	301 aa		5.97	□□□□□ -1.45
HIM1	YDR317W	TPO1	Q07824	586 aa		5.97	□□□□□ -1.45
HIM1	YDR317W	HMI1	Q12039	706 aa		5.97	□□□□□ -1.45
HIM1	YDR317W	ENA5	Q12691	1091 aa		5.97	□□□□□ -1.45
HIM1	YDR317W	FUN30	P31380	1131 aa		5.96	□□□□□ -1.46
HIM1	YDR317W	PPH3	P32345	308 aa		5.96	□□□□□ -1.46
HIM1	YDR317W	ECM21	P38167	1117 aa	Known RBP	5.96	□□□□□ -1.46
HIM1	YDR317W	VPS62	P53285	467 aa		5.96	□□□□□ -1.46
HIM1	YDR317W	YCR015C	P25616	317 aa		5.95	□□□□□ -1.46
HIM1	YDR317W	RPL8B	P29453	256 aa	Known RBP	5.95	□□□□□ -1.46
HIM1	YDR317W	AAR2	P32357	355 aa	Predicted RBP	5.95	□□□□□ -1.46
HIM1	YDR317W	GIP4	P39732	760 aa		5.95	□□□□□ -1.46
HIM1	YDR317W	ALR2	P43553	858 aa		5.95	□□□□□ -1.46
HIM1	YDR317W	SRP1	Q02821	542 aa	Known RBP	5.95	□□□□□ -1.46
HIM1	YDR317W	NAN1	Q02931	896 aa	Known RBP	5.95	□□□□□ -1.46
HIM1	YDR317W	ACK1	Q07622	623 aa	Predicted RBP	5.95	□□□□□ -1.46
HIM1	YDR317W	SSN2	P38931	1420 aa		5.94	□□□□□ -1.46
HIM1	YDR317W	LST4	P34239	828 aa		5.94	□□□□□ -1.46
HIM1	YDR317W	YBR284W	P38150	797 aa		5.94	□□□□□ -1.46
HIM1	YDR317W	YER158C	P40095	573 aa		5.94	□□□□□ -1.46
HIM1	YDR317W	YGR012W	P53206	393 aa		5.94	□□□□□ -1.46
HIM1	YDR317W	CLU1	Q03690	1277 aa	Known RBP	5.94	□□□□□ -1.46
HIM1	YDR317W	BUL2	Q03758	920 aa	Known RBP	5.94	□□□□□ -1.46
HIM1	YDR317W	TMA10	Q06177	86 aa		5.94	□□□□□ -1.46
HIM1	YDR317W	RXT3	Q07458	294 aa		5.94	□□□□□ -1.46
HIM1	YDR317W	ADY3	Q07732	790 aa		5.94	□□□□□ -1.46
HIM1	YDR317W	YKL222C	P35995	705 aa		5.93	□□□□□ -1.46
HIM1	YDR317W	YRO2	P38079	344 aa		5.93	□□□□□ -1.46
HIM1	YDR317W	GYP7	P48365	746 aa		5.93	□□□□□ -1.46
HIM1	YDR317W	WHI4	Q07655	649 aa	Known RBP	5.93	□□□□□ -1.46
HIM1	YDR317W	CTS1	P29029	562 aa		5.92	□□□□□ -1.46
HIM1	YDR317W	POA1	P38218	177 aa		5.92	□□□□□ -1.46
HIM1	YDR317W	TIM54	P47045	478 aa		5.92	□□□□□ -1.46
HIM1	YDR317W	SPE1	P08432	466 aa		5.91	□□□□□ -1.46
HIM1	YDR317W	TOP3	P13099	656 aa		5.91	□□□□□ -1.46
HIM1	YDR317W	DOM34	P33309	386 aa		5.91	□□□□□ -1.46
HIM1	YDR317W	YHR020W	P38708	688 aa	Known RBP	5.91	□□□□□ -1.46
HIM1	YDR317W	CCC2	P38995	1004 aa		5.91	□□□□□ -1.46
HIM1	YDR317W	TOK1	P40310	691 aa		5.91	□□□□□ -1.46
HIM1	YDR317W	PBP1	P53297	722 aa	Known RBP	5.91	□□□□□ -1.46
HIM1	YDR317W	YLR224W	Q05947	369 aa		5.91	□□□□□ -1.46
HIM1	YDR317W	EAF1	Q06337	982 aa		5.91	□□□□□ -1.46
HIM1	YDR317W	YPR196W	Q06595	470 aa		5.91	□□□□□ -1.46
HIM1	YDR317W	YPR071W	Q12346	211 aa		5.91	□□□□□ -1.46
HIM1	YDR317W	YLR358C	O13565	187 aa		5.9	□□□□□ -1.46
HIM1	YDR317W	PRP9	P19736	530 aa	Known RBP	5.9	□□□□□ -1.46
HIM1	YDR317W	SIT1	P39980	628 aa		5.9	□□□□□ -1.46
HIM1	YDR317W	UTP8	P53276	713 aa	Known RBP	5.9	□□□□□ -1.46
HIM1	YDR317W	HBN1	Q96VH4	193 aa		5.9	□□□□□ -1.46
HIM1	YDR317W	MDS3	P53094	1487 aa		5.9	□□□□□ -1.47
HIM1	YDR317W	SHM2	P37291	469 aa	Known RBP	5.89	□□□□□ -1.47
HIM1	YDR317W	IOC3	P43596	787 aa		5.89	□□□□□ -1.47
HIM1	YDR317W	MET12	P46151	657 aa		5.89	□□□□□ -1.47
HIM1	YDR317W	YKE2	P52553	114 aa		5.89	□□□□□ -1.47
HIM1	YDR317W	HUL5	P53119	910 aa		5.89	□□□□□ -1.47
HIM1	YDR317W	MSD1	P15179	658 aa	Known RBP	5.88	□□□□□ -1.47
HIM1	YDR317W	ARE1	P25628	610 aa		5.88	□□□□□ -1.47
HIM1	YDR317W	PLB1	P39105	664 aa		5.88	□□□□□ -1.47
HIM1	YDR317W	HSF1	P10961	833 aa		5.87	□□□□□ -1.47
HIM1	YDR317W	CDC48	P25694	835 aa	Known RBP	5.87	□□□□□ -1.47
HIM1	YDR317W	SCT1	P32784	759 aa		5.87	□□□□□ -1.47
HIM1	YDR317W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	not detected
HIM1	YDR317W	ERP6	P53198	216 aa		5.87	□□□□□ -1.47
HIM1	YDR317W	YGR125W	P53273	1036 aa		5.87	□□□□□ -1.47
HIM1	YDR317W	TPO2	P53283	614 aa		5.87	□□□□□ -1.47
HIM1	YDR317W	BDF2	Q07442	638 aa		5.87	□□□□□ -1.47
HIM1	YDR317W	NOP12	Q08208	459 aa	Known RBP	5.87	□□□□□ -1.47
HIM1	YDR317W	REV3	P14284	1504 aa		5.86	□□□□□ -1.47
HIM1	YDR317W	ADE8	P04161	214 aa		5.86	□□□□□ -1.47
HIM1	YDR317W	HIS5	P07172	385 aa		5.86	□□□□□ -1.47
HIM1	YDR317W	YKR078W	P36158	585 aa	Known RBP	5.86	□□□□□ -1.47
HIM1	YDR317W	YBR238C	P38330	731 aa	Known RBP	5.86	□□□□□ -1.47
HIM1	YDR317W	MCM6	P53091	1017 aa	Known RBP	5.86	□□□□□ -1.47
HIM1	YDR317W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.86	□□□□□ -1.47	not detected
HIM1	YDR317W	SSL1	Q04673	461 aa	Predicted RBP	5.86	□□□□□ -1.47
HIM1	YDR317W	SPO75	Q07798	868 aa		5.86	□□□□□ -1.47
HIM1	YDR317W	FLC1	Q08967	793 aa		5.86	□□□□□ -1.47
HIM1	YDR317W	CIT1	P00890	479 aa		5.85	□□□□□ -1.47
HIM1	YDR317W	NOT3	P06102	836 aa	Known RBP	5.85	□□□□□ -1.47
HIM1	YDR317W	RPD3	P32561	433 aa		5.85	□□□□□ -1.47
HIM1	YDR317W	BET3	P36149	193 aa		5.85	□□□□□ -1.47
HIM1	YDR317W	CHA4	P43634	648 aa		5.85	□□□□□ -1.47
HIM1	YDR317W	RAI1	P53063	387 aa	Known RBP	5.85	□□□□□ -1.47
HIM1	YDR317W	TAF8	Q03750	510 aa		5.85	□□□□□ -1.47
HIM1	YDR317W	LCD1	Q04377	747 aa		5.85	□□□□□ -1.47
HIM1	YDR317W	OSH2	Q12451	1283 aa		5.85	□□□□□ -1.47
HIM1	YDR317W	KCS1	Q12494	1050 aa		5.85	□□□□□ -1.47
HIM1	YDR317W	HSP60	P19882	572 aa	Known RBP	5.84	□□□□□ -1.47
HIM1	YDR317W	PET10	P36139	283 aa		5.84	□□□□□ -1.47
HIM1	YDR317W	PHO23	P50947	330 aa		5.84	□□□□□ -1.47
HIM1	YDR317W	RTA1	P53047	317 aa		5.84	□□□□□ -1.47
HIM1	YDR317W	TAF2	P23255	1407 aa		5.83	□□□□□ -1.48
HIM1	YDR317W	NPC2	Q12408	173 aa		5.83	□□□□□ -1.48
HIM1	YDR317W	PEP1	P32319	1579 aa		5.82	□□□□□ -1.48
HIM1	YDR317W	ATG2	P53855	1592 aa		5.82	□□□□□ -1.48
HIM1	YDR317W	RPC82	P32349	654 aa		5.82	□□□□□ -1.48
HIM1	YDR317W	REC104	P33323	182 aa		5.82	□□□□□ -1.48
HIM1	YDR317W	RSP5	P39940	809 aa	Known RBP	5.82	□□□□□ -1.48
HIM1	YDR317W	URM1	P40554	99 aa	Predicted RBP	5.82	□□□□□ -1.48
HIM1	YDR317W	YJL049W	P47048	450 aa		5.82	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 195.7 ms