RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W PSY2P40164 858 aa1.19□□□□□ -2.22
SCC2YDR180W HUL4P40985 892 aa1.19□□□□□ -2.22
SCC2YDR180W TAN1P53072 289 aaPredicted RBP1.19□□□□□ -2.22
SCC2YDR180W CAF130P53280 1122 aaPredicted RBP1.19□□□□□ -2.22
SCC2YDR180W RSM28Q03430 361 aa1.19□□□□□ -2.22
SCC2YDR180W SRC1Q03707 834 aa1.19□□□□□ -2.22
SCC2YDR180W ARO80Q04052 950 aa1.19□□□□□ -2.22
SCC2YDR180W FMP25Q08023 583 aa1.19□□□□□ -2.22
SCC2YDR180W CDC45Q08032 650 aa1.19□□□□□ -2.22
SCC2YDR180W FAP7Q12055 197 aaPredicted RBP1.19□□□□□ -2.22
SCC2YDR180W ATG9Q12142 997 aa1.19□□□□□ -2.22
SCC2YDR180W SEC39Q12745 709 aa1.19□□□□□ -2.22
SCC2YDR180W THS1P04801 734 aaKnown RBP1.19□□□□□ -2.22
SCC2YDR180W TOP3P13099 656 aa1.19□□□□□ -2.22
SCC2YDR180W POL3P15436 1097 aa1.19□□□□□ -2.22
SCC2YDR180W TFC4P33339 1025 aa1.19□□□□□ -2.22
SCC2YDR180W DEF1P35732 738 aaKnown RBP1.19□□□□□ -2.22
SCC2YDR180W PAN5P38787 379 aa1.19□□□□□ -2.22
SCC2YDR180W RSM24Q03976 319 aa1.19□□□□□ -2.22
SCC2YDR180W LCD1Q04377 747 aa1.19□□□□□ -2.22
SCC2YDR180W DCS1Q06151 350 aa1.19□□□□□ -2.22
SCC2YDR180W OSW1Q08692 278 aa1.19□□□□□ -2.22
SCC2YDR180W YOR378WQ08902 515 aa1.19□□□□□ -2.22
SCC2YDR180W CTI6Q08923 506 aa1.19□□□□□ -2.22
SCC2YDR180W RTT10Q08924 1013 aa1.19□□□□□ -2.22
SCC2YDR180W PCL8Q08966 492 aa1.19□□□□□ -2.22
SCC2YDR180W MCD1Q12158 566 aa1.19□□□□□ -2.22
SCC2YDR180W REC8Q12188 680 aa1.19□□□□□ -2.22
SCC2YDR180W HIF1Q12373 385 aa1.19□□□□□ -2.22
SCC2YDR180W ADH4P10127 382 aa1.18□□□□□ -2.22
SCC2YDR180W PET122P10355 254 aa1.18□□□□□ -2.22
SCC2YDR180W PUF4P25339 888 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
SCC2YDR180W RPL8BP29453 256 aaKnown RBP1.18□□□□□ -2.22
SCC2YDR180W PUP2P32379 260 aa1.18□□□□□ -2.22
SCC2YDR180W FBP26P32604 452 aa1.18□□□□□ -2.22
SCC2YDR180W BET3P36149 193 aa1.18□□□□□ -2.22
SCC2YDR180W MAL33P38157 468 aa1.18□□□□□ -2.22
SCC2YDR180W PEX18P38855 283 aa1.18□□□□□ -2.22
SCC2YDR180W VPS8P39702 1274 aa1.18□□□□□ -2.22
SCC2YDR180W RVS167P39743 482 aaKnown RBP1.18□□□□□ -2.22
SCC2YDR180W EMW1P42842 904 aaKnown RBP1.18□□□□□ -2.22
SCC2YDR180W RGD2P43556 714 aa1.18□□□□□ -2.22
SCC2YDR180W SAP155P43612 1002 aa1.18□□□□□ -2.22
SCC2YDR180W YNR063WP53749 607 aa1.18□□□□□ -2.22
SCC2YDR180W EMI2Q04409 500 aaKnown RBP1.18□□□□□ -2.22
SCC2YDR180W COG4Q06096 861 aa1.18□□□□□ -2.22
SCC2YDR180W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
SCC2YDR180W SLX4Q12098 748 aa1.18□□□□□ -2.22
SCC2YDR180W PUS1Q12211 544 aaKnown RBP1.18□□□□□ -2.22
SCC2YDR180W COBP00163 385 aa1.18□□□□□ -2.22
SCC2YDR180W TRP2P00899 507 aaKnown RBP1.18□□□□□ -2.22
SCC2YDR180W PRP16P15938 1071 aaPredicted RBP1.18□□□□□ -2.22
SCC2YDR180W SPE2P21182 396 aa1.18□□□□□ -2.22
SCC2YDR180W MSM1P22438 575 aa1.18□□□□□ -2.22
SCC2YDR180W MLS1P30952 554 aa1.18□□□□□ -2.22
SCC2YDR180W SWC3P31376 625 aa1.18□□□□□ -2.22
SCC2YDR180W YKL222CP35995 705 aa1.18□□□□□ -2.22
SCC2YDR180W VPS24P36095 224 aaKnown RBP1.18□□□□□ -2.22
SCC2YDR180W ISW1P38144 1129 aa1.18□□□□□ -2.22
SCC2YDR180W VPS41P38959 992 aa1.18□□□□□ -2.22
SCC2YDR180W PTC2P39966 464 aaKnown RBP1.18□□□□□ -2.22
SCC2YDR180W TAF1P46677 1066 aa1.18□□□□□ -2.22
SCC2YDR180W ITC1P53125 1264 aa1.18□□□□□ -2.22
SCC2YDR180W SDA1P53313 767 aaKnown RBP1.18□□□□□ -2.22
SCC2YDR180W HXT17P53631 564 aa1.18□□□□□ -2.22
SCC2YDR180W YPL109CQ02981 657 aa1.18□□□□□ -2.22
SCC2YDR180W SPO20Q04359 397 aa1.18□□□□□ -2.22
SCC2YDR180W IOC2Q12072 812 aa1.18□□□□□ -2.22
SCC2YDR180W PDR18P53756 1333 aa1.18□□□□□ -2.22
SCC2YDR180W FLP1P03870 423 aa1.18□□□□□ -2.22
SCC2YDR180W INO1P11986 533 aa1.18□□□□□ -2.22
SCC2YDR180W KIN2P13186 1147 aaKnown RBP1.18□□□□□ -2.22
SCC2YDR180W MEF1P25039 761 aa1.18□□□□□ -2.22
SCC2YDR180W VBA3P25594 458 aa1.18□□□□□ -2.22
SCC2YDR180W CDC11P32458 415 aa1.18□□□□□ -2.22
SCC2YDR180W KDX1P36005 433 aa1.18□□□□□ -2.22
SCC2YDR180W RCN1P36054 211 aa1.18□□□□□ -2.22
SCC2YDR180W MCM7P38132 845 aa1.18□□□□□ -2.22
SCC2YDR180W AMN1P38285 549 aaPredicted RBP1.18□□□□□ -2.22
SCC2YDR180W YHL012WP38709 493 aa1.18□□□□□ -2.22
SCC2YDR180W YAP1801P38856 637 aa1.18□□□□□ -2.22
SCC2YDR180W RGA1P39083 1007 aa1.18□□□□□ -2.22
SCC2YDR180W TMN3P40071 706 aa1.18□□□□□ -2.22
SCC2YDR180W YJL181WP46987 611 aa1.18□□□□□ -2.22
SCC2YDR180W YGR053CP53234 283 aa1.18□□□□□ -2.22
SCC2YDR180W YNL034WP53963 612 aa1.18□□□□□ -2.22
SCC2YDR180W YNL018CP53976 612 aa1.18□□□□□ -2.22
SCC2YDR180W PRP3Q03338 469 aaPredicted RBP1.18□□□□□ -2.22
SCC2YDR180W ADI1Q03677 179 aa1.18□□□□□ -2.22
SCC2YDR180W ATG16Q03818 150 aa1.18□□□□□ -2.22
SCC2YDR180W PEX19Q07418 342 aa1.18□□□□□ -2.22
SCC2YDR180W YDL124WQ07551 312 aaKnown RBP1.18□□□□□ -2.22
SCC2YDR180W YIG1Q08956 461 aa1.18□□□□□ -2.22
SCC2YDR180W RTC5Q12108 567 aaKnown RBP1.18□□□□□ -2.22
SCC2YDR180W YPR071WQ12346 211 aa1.18□□□□□ -2.22
SCC2YDR180W TOM70P07213 617 aaKnown RBP1.17□□□□□ -2.22
SCC2YDR180W MOD5P07884 428 aa1.17□□□□□ -2.22
SCC2YDR180W RAD18P10862 487 aa1.17□□□□□ -2.22
SCC2YDR180W PMR1P13586 950 aa1.17□□□□□ -2.22
SCC2YDR180W APA1P16550 321 aaKnown RBP1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms