RNA–Protein interactions for RNA: YDR003W

RCR2, Transcript of Vacuolar protein, yeast

Gene RCR2, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCR2	YDR003W	PSF2	P40359	213 aa		5.22	□□□□□ -1.57
RCR2	YDR003W	CDC55	Q00362	526 aa		5.22	□□□□□ -1.57
RCR2	YDR003W	GSF2	Q04697	403 aa	Known RBP	5.22	□□□□□ -1.57
RCR2	YDR003W	CRF1	Q04930	467 aa		5.22	□□□□□ -1.57
RCR2	YDR003W	BSC2	Q05611	235 aa		5.22	□□□□□ -1.57
RCR2	YDR003W	YLR225C	Q05948	407 aa	Known RBP	5.22	□□□□□ -1.57
RCR2	YDR003W	GSC2	P40989	1895 aa		5.22	□□□□□ -1.57
RCR2	YDR003W	STV1	P37296	890 aa		5.21	□□□□□ -1.58
RCR2	YDR003W	IOC3	P43596	787 aa		5.21	□□□□□ -1.58
RCR2	YDR003W	YFR016C	P43597	1233 aa	Known RBP	5.21	□□□□□ -1.58
RCR2	YDR003W	SPR28	Q04921	423 aa		5.21	□□□□□ -1.58
RCR2	YDR003W	RPS13	P05756	151 aa	Known RBP	5.2	□□□□□ -1.58
RCR2	YDR003W	CIT2	P08679	460 aa		5.2	□□□□□ -1.58
RCR2	YDR003W	FRD1	P32614	470 aa	Known RBP	5.2	□□□□□ -1.58
RCR2	YDR003W	RRP14	P36080	434 aa	Known RBP	5.2	□□□□□ -1.58
RCR2	YDR003W	SHM2	P37291	469 aa	Known RBP	5.2	□□□□□ -1.58
RCR2	YDR003W	MAD1	P40957	749 aa		5.2	□□□□□ -1.58
RCR2	YDR003W	MDG1	P53885	366 aa		5.2	□□□□□ -1.58
RCR2	YDR003W	AHC1	Q12433	566 aa		5.2	□□□□□ -1.58
RCR2	YDR003W	VPS13	Q07878	3144 aa		5.2	□□□□□ -1.58
RCR2	YDR003W	FLP1	P03870	423 aa		5.19	□□□□□ -1.58
RCR2	YDR003W	CBP1	P07252	654 aa		5.19	□□□□□ -1.58
RCR2	YDR003W	AFG2	P32794	780 aa		5.19	□□□□□ -1.58
RCR2	YDR003W	YGL082W	P53155	381 aa		5.19	□□□□□ -1.58
RCR2	YDR003W	VPS62	P53285	467 aa		5.19	□□□□□ -1.58
RCR2	YDR003W	ALG12	P53730	551 aa		5.19	□□□□□ -1.58
RCR2	YDR003W	RMT2	Q03305	412 aa		5.19	□□□□□ -1.58
RCR2	YDR003W	CLU1	Q03690	1277 aa	Known RBP	5.19	□□□□□ -1.58
RCR2	YDR003W	TSR4	P25040	408 aa		5.18	□□□□□ -1.58
RCR2	YDR003W	TOM20	P35180	183 aa		5.18	□□□□□ -1.58
RCR2	YDR003W	VPS16	Q03308	798 aa		5.18	□□□□□ -1.58
RCR2	YDR003W	PMT7	Q06644	662 aa		5.18	□□□□□ -1.58
RCR2	YDR003W	UBX5	Q06682	500 aa		5.18	□□□□□ -1.58
RCR2	YDR003W	GPI13	Q07830	1017 aa		5.18	□□□□□ -1.58
RCR2	YDR003W	UTP10	P42945	1769 aa	Known RBP	5.18	□□□□□ -1.58
RCR2	YDR003W	TUB2	P02557	457 aa	Known RBP	5.17	□□□□□ -1.58
RCR2	YDR003W	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.17	□□□□□ -1.58
RCR2	YDR003W	TY1A-DR6	P0CX70	440 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	TY1A-ER1	P0CX71	440 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	TY1A-LR2	P0CX72	440 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	TY1A-PL	P0CX73	440 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	TY1A-JR1	P0CX74	440 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	TY1A-LR3	P0CX75	440 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	TY1A-ML2	P0CX76	440 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	CTS1	P29029	562 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	PEP7	P32609	515 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	RPT1	P33299	467 aa	Known RBP	5.17	□□□□□ -1.58
RCR2	YDR003W	NMD3	P38861	518 aa	Known RBP	5.17	□□□□□ -1.58
RCR2	YDR003W	FPR3	P38911	411 aa	Known RBP	5.17	□□□□□ -1.58
RCR2	YDR003W	OSW7	P43611	510 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	NUT1	P53114	1132 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	TPP1	Q03796	238 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	AVO1	Q08236	1176 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	PUS7	Q08647	676 aa	Known RBP	5.17	□□□□□ -1.58
RCR2	YDR003W	TY1A-GR1	Q12085	440 aa		5.17	□□□□□ -1.58
RCR2	YDR003W	WRS1	Q12109	432 aa	Known RBP	5.17	□□□□□ -1.58
RCR2	YDR003W	RRG1	Q12167	365 aa	Predicted RBP	5.17	□□□□□ -1.58
RCR2	YDR003W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.17	□□□□□ -1.58
RCR2	YDR003W	TY1A-OL	Q92392	440 aa	Known RBP	5.17	□□□□□ -1.58
RCR2	YDR003W	NNK1	P36003	928 aa		5.16	□□□□□ -1.58
RCR2	YDR003W	YHR131C	P38835	850 aa		5.16	□□□□□ -1.58
RCR2	YDR003W	RVS167	P39743	482 aa	Known RBP	5.16	□□□□□ -1.58
RCR2	YDR003W	SAM37	P50110	327 aa		5.16	□□□□□ -1.58
RCR2	YDR003W	NSE3	Q05541	303 aa		5.16	□□□□□ -1.58
RCR2	YDR003W	PIN2	Q12057	282 aa		5.16	□□□□□ -1.58
RCR2	YDR003W	PHO4	P07270	312 aa	Known RBP	5.15	□□□□□ -1.59
RCR2	YDR003W	YFL040W	P43562	540 aa		5.15	□□□□□ -1.59
RCR2	YDR003W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
RCR2	YDR003W	UBP16	Q02863	499 aa		5.15	□□□□□ -1.59
RCR2	YDR003W	NOC3	Q07896	663 aa	Predicted RBP	5.15	□□□□□ -1.59
RCR2	YDR003W	SSF2	Q12153	453 aa	Predicted RBP	5.15	□□□□□ -1.59
RCR2	YDR003W	PNS1	Q12412	539 aa		5.15	□□□□□ -1.59
RCR2	YDR003W	NUP145	P49687	1317 aa		5.15	□□□□□ -1.59
RCR2	YDR003W	ARL1	P38116	183 aa	Known RBP	5.14	□□□□□ -1.59
RCR2	YDR003W	RPS26A	P39938	119 aa	Known RBP	5.14	□□□□□ -1.59
RCR2	YDR003W	RPS26B	P39939	119 aa	Known RBP	5.14	□□□□□ -1.59
RCR2	YDR003W	DAK2	P43550	591 aa		5.14	□□□□□ -1.59
RCR2	YDR003W	CDC53	Q12018	815 aa	Known RBP	5.14	□□□□□ -1.59
RCR2	YDR003W	LYS2	P07702	1392 aa		5.14	□□□□□ -1.59
RCR2	YDR003W	HKR1	P41809	1802 aa		5.13	□□□□□ -1.59
RCR2	YDR003W	TAO3	P40468	2376 aa		5.13	□□□□□ -1.59
RCR2	YDR003W	CLN2	P20438	545 aa		5.13	□□□□□ -1.59
RCR2	YDR003W	MCM5	P29496	775 aa	Known RBP	5.13	□□□□□ -1.59
RCR2	YDR003W	SWE1	P32944	819 aa		5.13	□□□□□ -1.59
RCR2	YDR003W	CIC1	P38779	376 aa	Known RBP	5.13	□□□□□ -1.59
RCR2	YDR003W	SHU2	P38957	223 aa		5.13	□□□□□ -1.59
RCR2	YDR003W	CWC24	P53769	259 aa		5.13	□□□□□ -1.59
RCR2	YDR003W	SNO2	P53823	222 aa		5.13	□□□□□ -1.59
RCR2	YDR003W	SYF1	Q04048	859 aa	Predicted RBP	5.13	□□□□□ -1.59
RCR2	YDR003W	SEC3	P33332	1336 aa	Known RBP	5.13	□□□□□ -1.59
RCR2	YDR003W	YLR358C	O13565	187 aa		5.12	□□□□□ -1.59
RCR2	YDR003W	SAM35	P14693	329 aa		5.12	□□□□□ -1.59
RCR2	YDR003W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
RCR2	YDR003W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
RCR2	YDR003W	YKL077W	P36081	392 aa		5.12	□□□□□ -1.59
RCR2	YDR003W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
RCR2	YDR003W	SUB1	P54000	292 aa	Known RBP	5.12	□□□□□ -1.59
RCR2	YDR003W	RPN4	Q03465	531 aa		5.12	□□□□□ -1.59
RCR2	YDR003W	POB3	Q04636	552 aa	Known RBP	5.12	□□□□□ -1.59
RCR2	YDR003W	YCS4	Q06156	1176 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 70.3 ms