RNA–Protein interactions for RNA: YDL115C

IWR1, Transcript of RNA polymerase II transport factor, conserved from yeast to humans, yeastyeast

Gene IWR1, Length 1,062 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IWR1YDL115C RPT1P33299 467 aaKnown RBP5.9□□□□□ -1.46
IWR1YDL115C WHI3P34761 661 aaKnown RBP5.9□□□□□ -1.46
IWR1YDL115C SQT1P35184 431 aa5.9□□□□□ -1.46
IWR1YDL115C PBY1P38254 753 aa5.9□□□□□ -1.46
IWR1YDL115C NEM1P38757 446 aa5.9□□□□□ -1.46
IWR1YDL115C NUG1P40010 520 aaKnown RBP5.9□□□□□ -1.46
IWR1YDL115C SLS1P42900 643 aa5.9□□□□□ -1.46
IWR1YDL115C CIT3P43635 486 aa5.9□□□□□ -1.46
IWR1YDL115C RSM26P47141 266 aa5.9□□□□□ -1.46
IWR1YDL115C RMD1Q03441 430 aa5.9□□□□□ -1.46
IWR1YDL115C SYF1Q04048 859 aaPredicted RBP5.9□□□□□ -1.46
IWR1YDL115C YOR059CQ08448 450 aaKnown RBP5.9□□□□□ -1.46
IWR1YDL115C RPS4AP0CX35 261 aaKnown RBP5.89□□□□□ -1.47
IWR1YDL115C RPS4BP0CX36 261 aaKnown RBP5.89□□□□□ -1.47
IWR1YDL115C SEC18P18759 758 aaKnown RBP5.89□□□□□ -1.47
IWR1YDL115C ASF1P32447 279 aa5.89□□□□□ -1.47
IWR1YDL115C VPS24P36095 224 aaKnown RBP5.89□□□□□ -1.47
IWR1YDL115C ALT1P52893 592 aa5.89□□□□□ -1.47
IWR1YDL115C ELA1P53861 379 aaPredicted RBP5.89□□□□□ -1.47
IWR1YDL115C PEX13P80667 386 aa5.89□□□□□ -1.47
IWR1YDL115C TOS4Q06266 489 aa5.89□□□□□ -1.47
IWR1YDL115C BRE4Q07660 1125 aa5.89□□□□□ -1.47
IWR1YDL115C UTP10P42945 1769 aaKnown RBP5.88□□□□□ -1.47
IWR1YDL115C PCT1P13259 424 aa5.88□□□□□ -1.47
IWR1YDL115C SMY2P32909 740 aaKnown RBP5.88□□□□□ -1.47
IWR1YDL115C NNK1P36003 928 aa5.88□□□□□ -1.47
IWR1YDL115C CTH1P47976 325 aa5.88□□□□□ -1.47
IWR1YDL115C UBX2Q04228 584 aa5.88□□□□□ -1.47
IWR1YDL115C MAG2Q06436 670 aaKnown RBP5.88□□□□□ -1.47
IWR1YDL115C RIM20Q12033 661 aa5.88□□□□□ -1.47
IWR1YDL115C NSI1Q12457 570 aa5.88□□□□□ -1.47
IWR1YDL115C HXK1P04806 485 aaKnown RBP5.87□□□□□ -1.47
IWR1YDL115C VMA4P22203 233 aaKnown RBP5.87□□□□□ -1.47
IWR1YDL115C PFF1P38244 976 aa5.87□□□□□ -1.47
IWR1YDL115C PEX28P38848 579 aa5.87□□□□□ -1.47
IWR1YDL115C FAA3P39002 694 aa5.87□□□□□ -1.47
IWR1YDL115C SNU71P53207 620 aaKnown RBP5.87□□□□□ -1.47
IWR1YDL115C YPL109CQ02981 657 aa5.87□□□□□ -1.47
IWR1YDL115C ADI1Q03677 179 aa5.87□□□□□ -1.47
IWR1YDL115C UTP5Q04177 643 aaKnown RBP5.87□□□□□ -1.47
IWR1YDL115C COG8Q04632 607 aa5.87□□□□□ -1.47
IWR1YDL115C PSF3Q12146 194 aa5.87□□□□□ -1.47
IWR1YDL115C ADR1P07248 1323 aa5.87□□□□□ -1.47
IWR1YDL115C POM152P39685 1337 aa5.86□□□□□ -1.47
IWR1YDL115C GCD1P09032 578 aaPredicted RBP5.86□□□□□ -1.47
IWR1YDL115C OPI1P21957 404 aa5.86□□□□□ -1.47
IWR1YDL115C NFS1P25374 497 aa5.86□□□□□ -1.47
IWR1YDL115C FRD1P32614 470 aaKnown RBP5.86□□□□□ -1.47
IWR1YDL115C OPY1P38271 328 aa5.86□□□□□ -1.47
IWR1YDL115C RRP8P38961 392 aaKnown RBP5.86□□□□□ -1.47
IWR1YDL115C YAR028WP39548 234 aa5.86□□□□□ -1.47
IWR1YDL115C MRPS35P53292 345 aa5.86□□□□□ -1.47
IWR1YDL115C THI3Q07471 609 aa5.86□□□□□ -1.47
IWR1YDL115C RIX7Q07844 837 aaKnown RBP5.86□□□□□ -1.47
IWR1YDL115C MGM1P32266 881 aa5.85□□□□□ -1.47
IWR1YDL115C IME2P32581 645 aa5.85□□□□□ -1.47
IWR1YDL115C YKL222CP35995 705 aa5.85□□□□□ -1.47
IWR1YDL115C AAP1P37898 856 aaKnown RBP5.85□□□□□ -1.47
IWR1YDL115C HXT13P39924 564 aa5.85□□□□□ -1.47
IWR1YDL115C SPO22P40511 975 aa5.85□□□□□ -1.47
IWR1YDL115C YNL193WP53870 558 aa5.85□□□□□ -1.47
IWR1YDL115C SSF2Q12153 453 aaPredicted RBP5.85□□□□□ -1.47
IWR1YDL115C LSP1Q12230 341 aaKnown RBP5.85□□□□□ -1.47
IWR1YDL115C ATG14P38270 344 aa5.84□□□□□ -1.47
IWR1YDL115C MGE1P38523 228 aa5.84□□□□□ -1.47
IWR1YDL115C OYE3P41816 400 aaPredicted RBP5.84□□□□□ -1.47
IWR1YDL115C HXT17P53631 564 aa5.84□□□□□ -1.47
IWR1YDL115C ARP5P53946 755 aa5.84□□□□□ -1.47
IWR1YDL115C SDH1Q00711 640 aa5.84□□□□□ -1.47
IWR1YDL115C UBP16Q02863 499 aa5.84□□□□□ -1.47
IWR1YDL115C ERO1Q03103 563 aa5.84□□□□□ -1.47
IWR1YDL115C EAR1Q03212 550 aa5.84□□□□□ -1.47
IWR1YDL115C RPN7Q06103 429 aaKnown RBP5.84□□□□□ -1.47
IWR1YDL115C GRX6Q12438 231 aa5.84□□□□□ -1.47
IWR1YDL115C CYB2P00175 591 aa5.83□□□□□ -1.48
IWR1YDL115C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
IWR1YDL115C RDH54P38086 958 aa5.83□□□□□ -1.48
IWR1YDL115C YGL140CP53120 1219 aa5.83□□□□□ -1.48
IWR1YDL115C ESF1Q06344 628 aaKnown RBP5.83□□□□□ -1.48
IWR1YDL115C LAP2Q10740 671 aa5.83□□□□□ -1.48
IWR1YDL115C YVC1Q12324 675 aa5.83□□□□□ -1.48
IWR1YDL115C RPS9BP05755 195 aaKnown RBP5.82□□□□□ -1.48
IWR1YDL115C KTR3P38130 404 aaPredicted RBP5.82□□□□□ -1.48
IWR1YDL115C HSE1P38753 452 aa5.82□□□□□ -1.48
IWR1YDL115C IOC3P43596 787 aa5.82□□□□□ -1.48
IWR1YDL115C IRC8P47046 822 aa5.82□□□□□ -1.48
IWR1YDL115C PEX14P53112 341 aa5.82□□□□□ -1.48
IWR1YDL115C RPT4P53549 437 aaKnown RBP5.82□□□□□ -1.48
IWR1YDL115C PSK2Q08217 1101 aa5.82□□□□□ -1.48
IWR1YDL115C MCD1Q12158 566 aa5.82□□□□□ -1.48
IWR1YDL115C TAH18Q12181 623 aa5.82□□□□□ -1.48
IWR1YDL115C CTT1P06115 562 aa5.81□□□□□ -1.48
IWR1YDL115C RPL19AP0CX82 189 aaKnown RBP5.81□□□□□ -1.48
IWR1YDL115C RPL19BP0CX83 189 aaPredicted RBP5.81□□□□□ -1.48
IWR1YDL115C BIK1P11709 440 aa5.81□□□□□ -1.48
IWR1YDL115C SEC23P15303 768 aaKnown RBP5.81□□□□□ -1.48
IWR1YDL115C KRE2P27809 442 aa5.81□□□□□ -1.48
IWR1YDL115C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
IWR1YDL115C PIC2P40035 300 aa5.81□□□□□ -1.48
IWR1YDL115C YMR147WP40218 223 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms