RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC7	YDL017W	CLN3	P13365	580 aa		7.71	□□□□□ -1.18
CDC7	YDL017W	RPO26	P20435	155 aa		7.71	□□□□□ -1.18
CDC7	YDL017W	MRF1	P30775	413 aa	Predicted RBP	7.71	□□□□□ -1.18
CDC7	YDL017W	XRS2	P33301	854 aa		7.71	□□□□□ -1.18
CDC7	YDL017W	CCT4	P39078	528 aa	Known RBP	7.71	□□□□□ -1.18
CDC7	YDL017W	TOF1	P53840	1238 aa		7.71	□□□□□ -1.18
CDC7	YDL017W	PHM6	Q05637	104 aa		7.71	□□□□□ -1.18
CDC7	YDL017W	SPH1	Q06160	661 aa		7.71	□□□□□ -1.18
CDC7	YDL017W	YPR078C	Q06813	372 aa		7.71	□□□□□ -1.18
CDC7	YDL017W	YLR001C	Q07895	862 aa		7.71	□□□□□ -1.18
CDC7	YDL017W	PGK1	P00560	416 aa	Known RBP	7.7	□□□□□ -1.18
CDC7	YDL017W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	7.7	□□□□□ -1.18	not detected
CDC7	YDL017W	PCK1	P10963	549 aa		7.7	□□□□□ -1.18
CDC7	YDL017W	KTR2	P33550	425 aa		7.7	□□□□□ -1.18
CDC7	YDL017W	YEL1	P34225	687 aa		7.7	□□□□□ -1.18
CDC7	YDL017W	BYE1	P36106	594 aa		7.7	□□□□□ -1.18
CDC7	YDL017W	SET5	P38890	526 aa	Known RBP	7.7	□□□□□ -1.18
CDC7	YDL017W	SDS3	P40505	327 aa		7.7	□□□□□ -1.18
CDC7	YDL017W	SMC3	P47037	1230 aa		7.7	□□□□□ -1.18
CDC7	YDL017W	ARK1	P53974	638 aa		7.7	□□□□□ -1.18
CDC7	YDL017W	CUR1	Q06469	252 aa		7.7	□□□□□ -1.18
CDC7	YDL017W	ATG23	Q06671	453 aa		7.7	□□□□□ -1.18
CDC7	YDL017W	OSH2	Q12451	1283 aa		7.7	□□□□□ -1.18
CDC7	YDL017W	YKL068W-A	Q3E826	78 aa		7.7	□□□□□ -1.18
CDC7	YDL017W	FBP1	P09201	348 aa		7.69	□□□□□ -1.18
CDC7	YDL017W	SAM1	P10659	382 aa	Known RBP	7.69	□□□□□ -1.18
CDC7	YDL017W	PER1	P25625	357 aa		7.69	□□□□□ -1.18
CDC7	YDL017W	SMC1	P32908	1225 aa		7.69	□□□□□ -1.18
CDC7	YDL017W	NIP100	P33420	868 aa		7.69	□□□□□ -1.18
CDC7	YDL017W	FIS1	P40515	155 aa		7.69	□□□□□ -1.18
CDC7	YDL017W	MMM1	P41800	426 aa		7.69	□□□□□ -1.18
CDC7	YDL017W	FIG4	P42837	879 aa		7.69	□□□□□ -1.18
CDC7	YDL017W	PTA1	Q01329	785 aa	Predicted RBP	7.69	□□□□□ -1.18
CDC7	YDL017W	GIR2	Q03768	265 aa	Predicted RBP	7.69	□□□□□ -1.18
CDC7	YDL017W	POB3	Q04636	552 aa	Known RBP	7.69	□□□□□ -1.18
CDC7	YDL017W	SIL1	Q08199	421 aa		7.69	□□□□□ -1.18
CDC7	YDL017W	THS1	P04801	734 aa	Known RBP	7.68	□□□□□ -1.18
CDC7	YDL017W	PAP1	P29468	568 aa	Known RBP	7.68	□□□□□ -1.18
CDC7	YDL017W	CLB5	P30283	435 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	DMA1	P38823	416 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	YMR124W	P39523	943 aa	Known RBP	7.68	□□□□□ -1.18
CDC7	YDL017W	RPN3	P40016	523 aa	Known RBP	7.68	□□□□□ -1.18
CDC7	YDL017W	YJL007C	P47080	104 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	CTR1	P49573	406 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	BTN2	P53286	410 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	YLR297W	Q05899	129 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	UBX5	Q06682	500 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	MLH2	Q07980	695 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	GIN4	Q12263	1142 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	RMP1	Q12530	201 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	TY1B-A	O13527	1196 aa	Known RBP	7.68	□□□□□ -1.18
CDC7	YDL017W	PHO8	P11491	566 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	TCP1	P12612	559 aa	Known RBP	7.68	□□□□□ -1.18
CDC7	YDL017W	CNS1	P33313	385 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	JNM1	P36224	373 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	UBP13	P38187	747 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	FKS1	P38631	1876 aa	Known RBP	7.68	□□□□□ -1.18
CDC7	YDL017W	KIC1	P38692	1080 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	MVP1	P40959	511 aa	Known RBP	7.68	□□□□□ -1.18
CDC7	YDL017W	LCB2	P40970	561 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	YGL039W	P53183	348 aa	Known RBP	7.68	□□□□□ -1.18
CDC7	YDL017W	RKM4	Q12504	494 aa		7.68	□□□□□ -1.18
CDC7	YDL017W	YSC83	P32792	385 aa		7.67	□□□□□ -1.18
CDC7	YDL017W	OCT1	P35999	772 aa		7.67	□□□□□ -1.18
CDC7	YDL017W	MCR1	P36060	302 aa	Known RBP	7.67	□□□□□ -1.18
CDC7	YDL017W	YKL023W	P36103	277 aa	Known RBP	7.67	□□□□□ -1.18
CDC7	YDL017W	COS5	P47187	383 aa		7.67	□□□□□ -1.18
CDC7	YDL017W	NCS2	P53923	493 aa	Predicted RBP	7.67	□□□□□ -1.18
CDC7	YDL017W	DUS3	Q06053	668 aa	Known RBP	7.67	□□□□□ -1.18
CDC7	YDL017W	CSR1	Q06705	408 aa	Known RBP	7.67	□□□□□ -1.18
CDC7	YDL017W	CRD1	Q07560	283 aa		7.67	□□□□□ -1.18
CDC7	YDL017W	ISA1	Q07821	250 aa	Predicted RBP	7.67	□□□□□ -1.18
CDC7	YDL017W	ERG11	P10614	530 aa		7.66	□□□□□ -1.18
CDC7	YDL017W	YDJ1	P25491	409 aa	Known RBP	7.66	□□□□□ -1.18
CDC7	YDL017W	SHP1	P34223	423 aa		7.66	□□□□□ -1.18
CDC7	YDL017W	HXT8	P40886	569 aa		7.66	□□□□□ -1.18
CDC7	YDL017W	YGR021W	P53212	290 aa		7.66	□□□□□ -1.18
CDC7	YDL017W	ZPR1	P53303	486 aa	Known RBP	7.66	□□□□□ -1.18
CDC7	YDL017W	PEX29	Q03370	554 aa		7.66	□□□□□ -1.18
CDC7	YDL017W	YMR114C	Q04471	368 aa	Known RBP	7.66	□□□□□ -1.18
CDC7	YDL017W	TSR1	Q07381	788 aa	Known RBP	7.66	□□□□□ -1.18
CDC7	YDL017W	NOP6	Q07623	225 aa	Known RBP	7.66	□□□□□ -1.18
CDC7	YDL017W	RLP24	Q07915	199 aa	Known RBP	7.66	□□□□□ -1.18
CDC7	YDL017W	TRP2	P00899	507 aa	Known RBP	7.65	□□□□□ -1.18
CDC7	YDL017W	SWI6	P09959	803 aa		7.65	□□□□□ -1.18
CDC7	YDL017W	DBP5	P20449	482 aa	Known RBP	7.65	□□□□□ -1.18
CDC7	YDL017W	MUD2	P36084	527 aa	Known RBP	7.65	□□□□□ -1.18
CDC7	YDL017W	BCH2	P36122	765 aa		7.65	□□□□□ -1.18
CDC7	YDL017W	PEA2	P40091	420 aa		7.65	□□□□□ -1.18
CDC7	YDL017W	ESBP6	P53918	673 aa		7.65	□□□□□ -1.18
CDC7	YDL017W	UTP14	Q04500	899 aa	Known RBP	7.65	□□□□□ -1.18
CDC7	YDL017W	UTP13	Q05946	817 aa	Known RBP	7.65	□□□□□ -1.18
CDC7	YDL017W	NUR1	Q12066	484 aa		7.65	□□□□□ -1.18
CDC7	YDL017W	CHS2	P14180	963 aa		7.64	□□□□□ -1.19
CDC7	YDL017W	GFA1	P14742	717 aa	Known RBP	7.64	□□□□□ -1.19
CDC7	YDL017W	UTR4	P32626	227 aa		7.64	□□□□□ -1.19
CDC7	YDL017W	NFU1	P32860	256 aa		7.64	□□□□□ -1.19
CDC7	YDL017W	TDA3	P38758	523 aa		7.64	□□□□□ -1.19
CDC7	YDL017W	VAB2	P40003	282 aa		7.64	□□□□□ -1.19
CDC7	YDL017W	MAD1	P40957	749 aa		7.64	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms