RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W HBS1P32769 611 aaKnown RBP6.12□□□□□ -1.43
PTC1YDL006W GEA1P47102 1408 aaPredicted RBP6.12□□□□□ -1.43
PTC1YDL006W RNH70P53331 553 aa6.12□□□□□ -1.43
PTC1YDL006W SRP1Q02821 542 aaKnown RBP6.12□□□□□ -1.43
PTC1YDL006W TAF8Q03750 510 aa6.12□□□□□ -1.43
PTC1YDL006W VPS15P22219 1454 aa6.11□□□□□ -1.43
PTC1YDL006W CAN1P04817 590 aa6.11□□□□□ -1.43
PTC1YDL006W UGA2P38067 497 aa6.11□□□□□ -1.43
PTC1YDL006W PEX7P39108 375 aa6.11□□□□□ -1.43
PTC1YDL006W MXR1P40029 184 aa6.11□□□□□ -1.43
PTC1YDL006W CCT8P47079 568 aaKnown RBP6.11□□□□□ -1.43
PTC1YDL006W YDL124WQ07551 312 aaKnown RBP6.11□□□□□ -1.43
PTC1YDL006W TRE1Q08919 783 aa6.11□□□□□ -1.43
PTC1YDL006W YLR125WQ12138 136 aa6.11□□□□□ -1.43
PTC1YDL006W CDC12P32468 407 aaKnown RBP6.1□□□□□ -1.43
PTC1YDL006W CCC2P38995 1004 aa6.1□□□□□ -1.43
PTC1YDL006W NUP82P40368 713 aa6.1□□□□□ -1.43
PTC1YDL006W ALG12P53730 551 aa6.1□□□□□ -1.43
PTC1YDL006W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
PTC1YDL006W DUS3Q06053 668 aaKnown RBP6.1□□□□□ -1.43
PTC1YDL006W ATG13Q06628 738 aa6.1□□□□□ -1.43
PTC1YDL006W YDR306CQ06640 478 aa6.1□□□□□ -1.43
PTC1YDL006W UBX5Q06682 500 aa6.1□□□□□ -1.43
PTC1YDL006W RSC58Q07979 502 aa6.1□□□□□ -1.43
PTC1YDL006W PRO1P32264 428 aa6.09□□□□□ -1.43
PTC1YDL006W AAR2P32357 355 aaPredicted RBP6.09□□□□□ -1.43
PTC1YDL006W PPG1P32838 368 aa6.09□□□□□ -1.43
PTC1YDL006W RRT14P40470 206 aa6.09□□□□□ -1.43
PTC1YDL006W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
PTC1YDL006W RCL1Q08096 367 aaPredicted RBP6.09□□□□□ -1.43
PTC1YDL006W PHO8P11491 566 aa6.08□□□□□ -1.44
PTC1YDL006W PPH3P32345 308 aa6.08□□□□□ -1.44
PTC1YDL006W TIM23P32897 222 aa6.08□□□□□ -1.44
PTC1YDL006W YRF1-1P0CX20 1796 aa6.08□□□□□ -1.44
PTC1YDL006W YRF1-5P0CX21 1796 aa6.08□□□□□ -1.44
PTC1YDL006W YRF1-8P0CX22 1796 aa6.08□□□□□ -1.44
PTC1YDL006W YFL054CP43549 646 aa6.07□□□□□ -1.44
PTC1YDL006W HRQ1Q05549 1077 aa6.07□□□□□ -1.44
PTC1YDL006W RSB1Q08417 382 aa6.07□□□□□ -1.44
PTC1YDL006W HBN1Q96VH4 193 aa6.07□□□□□ -1.44
PTC1YDL006W NUP157P40064 1391 aaKnown RBP6.06□□□□□ -1.44
PTC1YDL006W PDR12Q02785 1511 aa6.06□□□□□ -1.44
PTC1YDL006W BI4P03879 638 aa6.06□□□□□ -1.44
PTC1YDL006W ADE8P04161 214 aa6.06□□□□□ -1.44
PTC1YDL006W YKR078WP36158 585 aaKnown RBP6.06□□□□□ -1.44
PTC1YDL006W BRN1P38170 754 aa6.06□□□□□ -1.44
PTC1YDL006W FPR3P38911 411 aaKnown RBP6.06□□□□□ -1.44
PTC1YDL006W RTA1P53047 317 aa6.06□□□□□ -1.44
PTC1YDL006W ENV11P53246 860 aa6.06□□□□□ -1.44
PTC1YDL006W YGR130CP53278 816 aa6.06□□□□□ -1.44
PTC1YDL006W POB3Q04636 552 aaKnown RBP6.06□□□□□ -1.44
PTC1YDL006W CAT8P39113 1433 aa6.06□□□□□ -1.44
PTC1YDL006W ADP1P25371 1049 aa6.05□□□□□ -1.44
PTC1YDL006W YKL151CP36059 337 aa6.05□□□□□ -1.44
PTC1YDL006W PET10P36139 283 aa6.05□□□□□ -1.44
PTC1YDL006W BET3P36149 193 aa6.05□□□□□ -1.44
PTC1YDL006W PTC7P38797 343 aa6.05□□□□□ -1.44
PTC1YDL006W SAH1P39954 449 aaKnown RBP6.05□□□□□ -1.44
PTC1YDL006W LCD1Q04377 747 aa6.05□□□□□ -1.44
PTC1YDL006W MDM38Q08179 573 aa6.05□□□□□ -1.44
PTC1YDL006W MED7Q08278 222 aa6.05□□□□□ -1.44
PTC1YDL006W IRC20Q06554 1556 aa6.05□□□□□ -1.44
PTC1YDL006W DRS2P39524 1355 aa6.05□□□□□ -1.44
PTC1YDL006W IKI3Q06706 1349 aaKnown RBP6.04□□□□□ -1.44
PTC1YDL006W CYC7P00045 113 aa6.04□□□□□ -1.44
PTC1YDL006W MET6P05694 767 aaKnown RBP6.04□□□□□ -1.44
PTC1YDL006W ACE2P21192 770 aa6.04□□□□□ -1.44
PTC1YDL006W SPC42P36094 363 aa6.04□□□□□ -1.44
PTC1YDL006W ORC3P54790 616 aa6.04□□□□□ -1.44
PTC1YDL006W BUL2Q03758 920 aaKnown RBP6.04□□□□□ -1.44
PTC1YDL006W SPO14P36126 1683 aa6.04□□□□□ -1.44
PTC1YDL006W GCD1P09032 578 aaPredicted RBP6.03□□□□□ -1.44
PTC1YDL006W ERR1P0CX10 437 aa6.03□□□□□ -1.44
PTC1YDL006W ERR2P0CX11 437 aa6.03□□□□□ -1.44
PTC1YDL006W FUN30P31380 1131 aa6.03□□□□□ -1.44
PTC1YDL006W DOM34P33309 386 aa6.03□□□□□ -1.44
PTC1YDL006W GTS1P40956 396 aa6.03□□□□□ -1.44
PTC1YDL006W SEC26P41810 973 aaKnown RBP6.03□□□□□ -1.44
PTC1YDL006W UBP6P43593 499 aaKnown RBP6.03□□□□□ -1.44
PTC1YDL006W CCM1P48237 864 aaPredicted RBP6.03□□□□□ -1.44
PTC1YDL006W GYP7P48365 746 aa6.03□□□□□ -1.44
PTC1YDL006W MTC3P53077 123 aa6.03□□□□□ -1.44
PTC1YDL006W SSY1Q03770 852 aa6.03□□□□□ -1.44
PTC1YDL006W SVS1Q12254 260 aa6.03□□□□□ -1.44
PTC1YDL006W SPS1P08458 490 aa6.02□□□□□ -1.45
PTC1YDL006W MSD1P15179 658 aaKnown RBP6.02□□□□□ -1.45
PTC1YDL006W RPC82P32349 654 aa6.02□□□□□ -1.45
PTC1YDL006W AIM26P32858 118 aa6.02□□□□□ -1.45
PTC1YDL006W AFR1P33304 620 aa6.02□□□□□ -1.45
PTC1YDL006W YRO2P38079 344 aa6.02□□□□□ -1.45
PTC1YDL006W YBR238CP38330 731 aaKnown RBP6.02□□□□□ -1.45
PTC1YDL006W SRT1Q03175 343 aa6.02□□□□□ -1.45
PTC1YDL006W MTC5Q03897 1148 aa6.02□□□□□ -1.45
PTC1YDL006W UTP14Q04500 899 aaKnown RBP6.02□□□□□ -1.45
PTC1YDL006W GDB1Q06625 1536 aa6.02□□□□□ -1.45
PTC1YDL006W PDR10P51533 1564 aa6.01□□□□□ -1.45
PTC1YDL006W NUP170P38181 1502 aa6.01□□□□□ -1.45
PTC1YDL006W TY3B-GQ99315 1547 aa6.01□□□□□ -1.45
PTC1YDL006W TRP3P00937 484 aa6.01□□□□□ -1.45
PTC1YDL006W TOM70P07213 617 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms