RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C MXR1P40029 184 aa4.37□□□□□ -1.71
SHG1YBR258C YFL054CP43549 646 aa4.37□□□□□ -1.71
SHG1YBR258C TIM54P47045 478 aa4.37□□□□□ -1.71
SHG1YBR258C ERP6P53198 216 aa4.37□□□□□ -1.71
SHG1YBR258C MTC5Q03897 1148 aa4.37□□□□□ -1.71
SHG1YBR258C SPO75Q07798 868 aa4.37□□□□□ -1.71
SHG1YBR258C CDC53Q12018 815 aaKnown RBP4.37□□□□□ -1.71
SHG1YBR258C YLL058WQ12198 575 aa4.37□□□□□ -1.71
SHG1YBR258C TRP3P00937 484 aa4.36□□□□□ -1.71
SHG1YBR258C THS1P04801 734 aaKnown RBP4.36□□□□□ -1.71
SHG1YBR258C GCD1P09032 578 aaPredicted RBP4.36□□□□□ -1.71
SHG1YBR258C CDC12P32468 407 aaKnown RBP4.36□□□□□ -1.71
SHG1YBR258C SRP40P32583 406 aaPredicted RBP4.36□□□□□ -1.71
SHG1YBR258C HBS1P32769 611 aaKnown RBP4.36□□□□□ -1.71
SHG1YBR258C SCT1P32784 759 aa4.36□□□□□ -1.71
SHG1YBR258C YKR073CP36153 106 aa4.36□□□□□ -1.71
SHG1YBR258C FLC1Q08967 793 aa4.36□□□□□ -1.71
SHG1YBR258C NSI1Q12457 570 aa4.36□□□□□ -1.71
SHG1YBR258C HAP1P0CE41 1502 aa4.36□□□□□ -1.71
SHG1YBR258C CYC7P00045 113 aa4.35□□□□□ -1.71
SHG1YBR258C CIT1P00890 479 aa4.35□□□□□ -1.71
SHG1YBR258C HSP60P19882 572 aaKnown RBP4.35□□□□□ -1.71
SHG1YBR258C YKL091CP33324 310 aaKnown RBP4.35□□□□□ -1.71
SHG1YBR258C YKL151CP36059 337 aa4.35□□□□□ -1.71
SHG1YBR258C RRT14P40470 206 aa4.35□□□□□ -1.71
SHG1YBR258C YGR130CP53278 816 aa4.35□□□□□ -1.71
SHG1YBR258C TAF8Q03750 510 aa4.35□□□□□ -1.71
SHG1YBR258C HRQ1Q05549 1077 aa4.35□□□□□ -1.71
SHG1YBR258C NBA1Q08229 501 aaKnown RBP4.35□□□□□ -1.71
SHG1YBR258C MED7Q08278 222 aa4.35□□□□□ -1.71
SHG1YBR258C LPX1Q12405 387 aaKnown RBP4.35□□□□□ -1.71
SHG1YBR258C OSH2Q12451 1283 aa4.35□□□□□ -1.71
SHG1YBR258C CIT2P08679 460 aa4.34□□□□□ -1.71
SHG1YBR258C UGA2P38067 497 aa4.34□□□□□ -1.71
SHG1YBR258C PBP2P38151 413 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
SHG1YBR258C GGA2P38817 585 aaKnown RBP4.34□□□□□ -1.71
SHG1YBR258C MTC3P53077 123 aa4.34□□□□□ -1.71
SHG1YBR258C ENV11P53246 860 aa4.34□□□□□ -1.71
SHG1YBR258C BUL2Q03758 920 aaKnown RBP4.34□□□□□ -1.71
SHG1YBR258C YOR131CQ12486 218 aa4.34□□□□□ -1.71
SHG1YBR258C AIM44Q99299 758 aa4.34□□□□□ -1.71
SHG1YBR258C YOR1P53049 1477 aa4.34□□□□□ -1.71
SHG1YBR258C YBT1P32386 1661 aa4.34□□□□□ -1.71
SHG1YBR258C TY1B-NL2Q99337 1749 aaKnown RBP4.33□□□□□ -1.72
SHG1YBR258C BI4P03879 638 aa4.33□□□□□ -1.72
SHG1YBR258C GAL11P19659 1081 aa4.33□□□□□ -1.72
SHG1YBR258C ADP1P25371 1049 aa4.33□□□□□ -1.72
SHG1YBR258C PRO1P32264 428 aa4.33□□□□□ -1.72
SHG1YBR258C TOS1P38288 455 aa4.33□□□□□ -1.72
SHG1YBR258C YBR238CP38330 731 aaKnown RBP4.33□□□□□ -1.72
SHG1YBR258C PTC7P38797 343 aa4.33□□□□□ -1.72
SHG1YBR258C RSP5P39940 809 aaKnown RBP4.33□□□□□ -1.72
SHG1YBR258C CHZ1P40019 153 aaPredicted RBP4.33□□□□□ -1.72
SHG1YBR258C ALR2P43553 858 aa4.33□□□□□ -1.72
SHG1YBR258C TPO2P53283 614 aa4.33□□□□□ -1.72
SHG1YBR258C SSY1Q03770 852 aa4.33□□□□□ -1.72
SHG1YBR258C EAF1Q06337 982 aa4.33□□□□□ -1.72
SHG1YBR258C CAN1P04817 590 aa4.32□□□□□ -1.72
SHG1YBR258C ACE2P21192 770 aa4.32□□□□□ -1.72
SHG1YBR258C PUB1P32588 453 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
SHG1YBR258C AFR1P33304 620 aa4.32□□□□□ -1.72
SHG1YBR258C RRP14P36080 434 aaKnown RBP4.32□□□□□ -1.72
SHG1YBR258C NMD2P38798 1089 aaKnown RBP4.32□□□□□ -1.72
SHG1YBR258C OSW7P43611 510 aa4.32□□□□□ -1.72
SHG1YBR258C YGR125WP53273 1036 aa4.32□□□□□ -1.72
SHG1YBR258C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
SHG1YBR258C SRP1Q02821 542 aaKnown RBP4.32□□□□□ -1.72
SHG1YBR258C SIZ1Q04195 904 aa4.32□□□□□ -1.72
SHG1YBR258C MDM38Q08179 573 aa4.32□□□□□ -1.72
SHG1YBR258C ARE1P25628 610 aa4.31□□□□□ -1.72
SHG1YBR258C FUN30P31380 1131 aa4.31□□□□□ -1.72
SHG1YBR258C YKR078WP36158 585 aaKnown RBP4.31□□□□□ -1.72
SHG1YBR258C ABZ1P37254 787 aaPredicted RBP4.31□□□□□ -1.72
SHG1YBR258C GTS1P40956 396 aa4.31□□□□□ -1.72
SHG1YBR258C SEC26P41810 973 aaKnown RBP4.31□□□□□ -1.72
SHG1YBR258C CTH1P47976 325 aa4.31□□□□□ -1.72
SHG1YBR258C GYP7P48365 746 aa4.31□□□□□ -1.72
SHG1YBR258C INP52P50942 1183 aa4.31□□□□□ -1.72
SHG1YBR258C RTA1P53047 317 aa4.31□□□□□ -1.72
SHG1YBR258C DUS3Q06053 668 aaKnown RBP4.31□□□□□ -1.72
SHG1YBR258C YDR306CQ06640 478 aa4.31□□□□□ -1.72
SHG1YBR258C UBX5Q06682 500 aa4.31□□□□□ -1.72
SHG1YBR258C HBN1Q96VH4 193 aa4.31□□□□□ -1.72
SHG1YBR258C RPC82P32349 654 aa4.3□□□□□ -1.72
SHG1YBR258C CDC11P32458 415 aa4.3□□□□□ -1.72
SHG1YBR258C PET10P36139 283 aa4.3□□□□□ -1.72
SHG1YBR258C BET3P36149 193 aa4.3□□□□□ -1.72
SHG1YBR258C GIC1P38785 314 aa4.3□□□□□ -1.72
SHG1YBR258C HUL4P40985 892 aa4.3□□□□□ -1.72
SHG1YBR258C YKE2P52553 114 aa4.3□□□□□ -1.72
SHG1YBR258C DOS2P54858 310 aa4.3□□□□□ -1.72
SHG1YBR258C SDH1Q00711 640 aa4.3□□□□□ -1.72
SHG1YBR258C SRT1Q03175 343 aa4.3□□□□□ -1.72
SHG1YBR258C BRE4Q07660 1125 aa4.3□□□□□ -1.72
SHG1YBR258C RIB2Q12362 591 aaKnown RBP4.3□□□□□ -1.72
SHG1YBR258C BCK1Q01389 1478 aa4.3□□□□□ -1.72
SHG1YBR258C SPS1P08458 490 aa4.29□□□□□ -1.72
SHG1YBR258C NPP1P25353 742 aa4.29□□□□□ -1.72
SHG1YBR258C AIM26P32858 118 aa4.29□□□□□ -1.72
SHG1YBR258C TIM23P32897 222 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms