RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	UGA2	P38067	497 aa		6.08	□□□□□ -1.44
ECM1	YAL059W	TAT2	P38967	592 aa		6.08	□□□□□ -1.44
ECM1	YAL059W	CHZ1	P40019	153 aa	Predicted RBP	6.08	□□□□□ -1.44
ECM1	YAL059W	FOL2	P51601	243 aa	Known RBP	6.08	□□□□□ -1.44
ECM1	YAL059W	NAN1	Q02931	896 aa	Known RBP	6.08	□□□□□ -1.44
ECM1	YAL059W	SVL3	Q03088	825 aa	Known RBP	6.08	□□□□□ -1.44
ECM1	YAL059W	SLX4	Q12098	748 aa		6.08	□□□□□ -1.44
ECM1	YAL059W	NOP14	Q99207	810 aa	Known RBP	6.08	□□□□□ -1.44
ECM1	YAL059W	BLI1	P35727	113 aa		6.07	□□□□□ -1.44
ECM1	YAL059W	MBP1	P39678	833 aa		6.07	□□□□□ -1.44
ECM1	YAL059W	DAS1	P47005	663 aa		6.07	□□□□□ -1.44
ECM1	YAL059W	YOR378W	Q08902	515 aa		6.07	□□□□□ -1.44
ECM1	YAL059W	ADR1	P07248	1323 aa		6.06	□□□□□ -1.44
ECM1	YAL059W	ETP1	P38748	585 aa	Known RBP	6.06	□□□□□ -1.44
ECM1	YAL059W	GEM1	P39722	662 aa		6.06	□□□□□ -1.44
ECM1	YAL059W	SEC26	P41810	973 aa	Known RBP	6.06	□□□□□ -1.44
ECM1	YAL059W	YNR029C	P53729	429 aa	Known RBP	6.06	□□□□□ -1.44
ECM1	YAL059W	NYV1	Q12255	253 aa		6.06	□□□□□ -1.44
ECM1	YAL059W	YDL177C	Q12257	170 aa		6.06	□□□□□ -1.44
ECM1	YAL059W	BI4	P03879	638 aa		6.05	□□□□□ -1.44
ECM1	YAL059W	MRP8	P35719	219 aa		6.05	□□□□□ -1.44
ECM1	YAL059W	YGR021W	P53212	290 aa		6.05	□□□□□ -1.44
ECM1	YAL059W	TMA7	Q3E764	64 aa	Known RBP	6.05	□□□□□ -1.44
ECM1	YAL059W	STE5	P32917	917 aa		6.04	□□□□□ -1.44
ECM1	YAL059W	SEG2	P34250	1132 aa		6.04	□□□□□ -1.44
ECM1	YAL059W	ECL1	P48235	211 aa		6.04	□□□□□ -1.44
ECM1	YAL059W	SVS1	Q12254	260 aa		6.04	□□□□□ -1.44
ECM1	YAL059W	MTC2	P34246	357 aa		6.03	□□□□□ -1.44
ECM1	YAL059W	ABZ1	P37254	787 aa	Predicted RBP	6.03	□□□□□ -1.44
ECM1	YAL059W	MPP10	P47083	593 aa	Known RBP	6.03	□□□□□ -1.44
ECM1	YAL059W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	6.03	□□□□□ -1.44	not detected
ECM1	YAL059W	ATG13	Q06628	738 aa		6.03	□□□□□ -1.44
ECM1	YAL059W	TMA17	Q12513	150 aa		6.03	□□□□□ -1.44
ECM1	YAL059W	SFP1	P32432	683 aa		6.02	□□□□□ -1.45
ECM1	YAL059W	RFC5	P38251	354 aa		6.02	□□□□□ -1.45
ECM1	YAL059W	PBY1	P38254	753 aa		6.02	□□□□□ -1.45
ECM1	YAL059W	YBR184W	P38299	523 aa		6.02	□□□□□ -1.45
ECM1	YAL059W	IRR1	P40541	1150 aa		6.02	□□□□□ -1.45
ECM1	YAL059W	HRQ1	Q05549	1077 aa		6.02	□□□□□ -1.45
ECM1	YAL059W	RIB2	Q12362	591 aa	Known RBP	6.02	□□□□□ -1.45
ECM1	YAL059W	ERR1	P0CX10	437 aa		6.01	□□□□□ -1.45
ECM1	YAL059W	ERR2	P0CX11	437 aa		6.01	□□□□□ -1.45
ECM1	YAL059W	ACE2	P21192	770 aa		6.01	□□□□□ -1.45
ECM1	YAL059W	CDC11	P32458	415 aa		6.01	□□□□□ -1.45
ECM1	YAL059W	NFU1	P32860	256 aa		6.01	□□□□□ -1.45
ECM1	YAL059W	RSP5	P39940	809 aa	Known RBP	6.01	□□□□□ -1.45
ECM1	YAL059W	VID27	P40157	782 aa		6.01	□□□□□ -1.45
ECM1	YAL059W	NIT1	P40447	199 aa		6.01	□□□□□ -1.45
ECM1	YAL059W	RRT14	P40470	206 aa		6.01	□□□□□ -1.45
ECM1	YAL059W	AVT1	P47082	602 aa		6.01	□□□□□ -1.45
ECM1	YAL059W	ENV11	P53246	860 aa		6.01	□□□□□ -1.45
ECM1	YAL059W	FLC1	Q08967	793 aa		6.01	□□□□□ -1.45
ECM1	YAL059W	ATP4	P05626	244 aa		6	□□□□□ -1.45
ECM1	YAL059W	YEF3	P16521	1044 aa	Known RBP	6	□□□□□ -1.45
ECM1	YAL059W	OPI1	P21957	404 aa		6	□□□□□ -1.45
ECM1	YAL059W	YKL151C	P36059	337 aa		6	□□□□□ -1.45
ECM1	YAL059W	PFD1	P46988	109 aa		6	□□□□□ -1.45
ECM1	YAL059W	DUS3	Q06053	668 aa	Known RBP	6	□□□□□ -1.45
ECM1	YAL059W	RPL8A	P17076	256 aa	Known RBP	5.99	□□□□□ -1.45
ECM1	YAL059W	GAS1	P22146	559 aa	Known RBP	5.99	□□□□□ -1.45
ECM1	YAL059W	HIR1	P32479	840 aa		5.99	□□□□□ -1.45
ECM1	YAL059W	MAL31	P38156	614 aa		5.99	□□□□□ -1.45
ECM1	YAL059W	YHR020W	P38708	688 aa	Known RBP	5.99	□□□□□ -1.45
ECM1	YAL059W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.99	□□□□□ -1.45	not detected
ECM1	YAL059W	HFM1	P51979	1187 aa		5.99	□□□□□ -1.45
ECM1	YAL059W	MRPL22	P53881	309 aa		5.99	□□□□□ -1.45
ECM1	YAL059W	MDM1	Q01846	1127 aa		5.99	□□□□□ -1.45
ECM1	YAL059W	MEH1	Q02205	184 aa		5.99	□□□□□ -1.45
ECM1	YAL059W	RSM24	Q03976	319 aa		5.99	□□□□□ -1.45
ECM1	YAL059W	SND1	Q04007	877 aa		5.99	□□□□□ -1.45
ECM1	YAL059W	APL1	P27351	700 aa		5.98	□□□□□ -1.45
ECM1	YAL059W	CDC12	P32468	407 aa	Known RBP	5.98	□□□□□ -1.45
ECM1	YAL059W	ELM1	P32801	640 aa		5.98	□□□□□ -1.45
ECM1	YAL059W	TSA1	P34760	196 aa	Known RBP	5.98	□□□□□ -1.45
ECM1	YAL059W	SAH1	P39954	449 aa	Known RBP	5.98	□□□□□ -1.45
ECM1	YAL059W	HLJ1	P48353	224 aa		5.98	□□□□□ -1.45
ECM1	YAL059W	YGR237C	P50089	785 aa		5.98	□□□□□ -1.45
ECM1	YAL059W	MTC3	P53077	123 aa		5.98	□□□□□ -1.45
ECM1	YAL059W	PRP43	P53131	767 aa	Known RBP	5.98	□□□□□ -1.45
ECM1	YAL059W	YGR125W	P53273	1036 aa		5.98	□□□□□ -1.45
ECM1	YAL059W	CWC22	P53333	577 aa	Known RBP	5.98	□□□□□ -1.45
ECM1	YAL059W	SNO2	P53823	222 aa		5.98	□□□□□ -1.45
ECM1	YAL059W	YDR306C	Q06640	478 aa		5.98	□□□□□ -1.45
ECM1	YAL059W	CDA2	Q06703	312 aa		5.98	□□□□□ -1.45
ECM1	YAL059W	FMP25	Q08023	583 aa		5.98	□□□□□ -1.45
ECM1	YAL059W	MDM38	Q08179	573 aa		5.98	□□□□□ -1.45
ECM1	YAL059W	NTG2	Q08214	380 aa		5.98	□□□□□ -1.45
ECM1	YAL059W	SNU66	Q12420	587 aa	Predicted RBP	5.98	□□□□□ -1.45
ECM1	YAL059W	CYC1	P00044	109 aa	Predicted RBP	5.97	□□□□□ -1.45
ECM1	YAL059W	CIT1	P00890	479 aa		5.97	□□□□□ -1.45
ECM1	YAL059W	KIN2	P13186	1147 aa	Known RBP	5.97	□□□□□ -1.45
ECM1	YAL059W	CMP2	P14747	604 aa		5.97	□□□□□ -1.45
ECM1	YAL059W	PRP9	P19736	530 aa	Known RBP	5.97	□□□□□ -1.45
ECM1	YAL059W	TFC3	P34111	1160 aa		5.97	□□□□□ -1.45
ECM1	YAL059W	JNM1	P36224	373 aa		5.97	□□□□□ -1.45
ECM1	YAL059W	YAP1801	P38856	637 aa		5.97	□□□□□ -1.45
ECM1	YAL059W	IES5	P40060	125 aa		5.97	□□□□□ -1.45
ECM1	YAL059W	YJR120W	P47157	116 aa		5.97	□□□□□ -1.45
ECM1	YAL059W	SRP1	Q02821	542 aa	Known RBP	5.97	□□□□□ -1.45
ECM1	YAL059W	SIZ1	Q04195	904 aa		5.97	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 75.7 ms