RNA–Protein interactions for RNA: ENST00000640773.1

KCNMA1-288, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-288ENST00000640773 ATG3Q9NT62 314 aa10.85□□□□□ -0.67
KCNMA1-288ENST00000640773 ZKSCAN5Q9Y2L8 839 aa10.85□□□□□ -0.67
KCNMA1-288ENST00000640773 TRIM37O94972 964 aa10.85□□□□□ -0.67
KCNMA1-288ENST00000640773 MMP14P50281 582 aa10.85□□□□□ -0.67
KCNMA1-288ENST00000640773 C20orf194Q5TEA3 1177 aa10.85□□□□□ -0.67
KCNMA1-288ENST00000640773 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.85□□□□□ -0.67
KCNMA1-288ENST00000640773 NUP98P52948 1817 aa10.85□□□□□ -0.67
KCNMA1-288ENST00000640773 ZBTB22O15209 634 aa10.84□□□□□ -0.67
KCNMA1-288ENST00000640773 BABAM1Q9NWV8 329 aa10.84□□□□□ -0.67
KCNMA1-288ENST00000640773 WDR43Q15061 677 aaKnown RBP eCLIP10.84□□□□□ -0.67
KCNMA1-288ENST00000640773 SLC27A3Q5K4L6 730 aa10.84□□□□□ -0.67
KCNMA1-288ENST00000640773 GAS2L2Q8NHY3 880 aa10.84□□□□□ -0.67
KCNMA1-288ENST00000640773 ARFGEF2Q9Y6D5 1785 aa10.84□□□□□ -0.67
KCNMA1-288ENST00000640773 GTF2F1P35269 517 aaKnown RBP eCLIP10.83□□□□□ -0.67
KCNMA1-288ENST00000640773 NFE2L2Q16236 605 aa10.83□□□□□ -0.67
KCNMA1-288ENST00000640773 PDLIM2Q96JY6 352 aa10.83□□□□□ -0.67
KCNMA1-288ENST00000640773 RBM25P49756 843 aaKnown RBP10.83□□□□□ -0.68
KCNMA1-288ENST00000640773 LAMB2P55268 1798 aa10.83□□□□□ -0.68
KCNMA1-288ENST00000640773 GNAT3A8MTJ3 354 aa10.83□□□□□ -0.68
KCNMA1-288ENST00000640773 PRIM1P49642 420 aaKnown RBP10.83□□□□□ -0.68
KCNMA1-288ENST00000640773 ATP2B3Q16720 1220 aa10.83□□□□□ -0.68
KCNMA1-288ENST00000640773 CDCA7LQ96GN5 454 aa10.83□□□□□ -0.68
KCNMA1-288ENST00000640773 PRIMPOLQ96LW4 560 aa10.83□□□□□ -0.68
KCNMA1-288ENST00000640773 GBP4Q96PP9 640 aa10.83□□□□□ -0.68
KCNMA1-288ENST00000640773 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.82□□□□□ -0.68
KCNMA1-288ENST00000640773 RUNDC1Q96C34 613 aa10.82□□□□□ -0.68
KCNMA1-288ENST00000640773 U2SURPO15042 1029 aaKnown RBP10.82□□□□□ -0.68
KCNMA1-288ENST00000640773 HMGN5P82970 282 aaKnown RBP10.82□□□□□ -0.68
KCNMA1-288ENST00000640773 ZNF710Q8N1W2 664 aa10.82□□□□□ -0.68
KCNMA1-288ENST00000640773 TMPOP42166 694 aaKnown RBP10.82□□□□□ -0.68
KCNMA1-288ENST00000640773 EZH2Q15910 746 aaKnown RBP10.81□□□□□ -0.68
KCNMA1-288ENST00000640773 PALLDQ8WX93 1383 aa10.81□□□□□ -0.68
KCNMA1-288ENST00000640773 CCDC66A2RUB6 948 aa10.81□□□□□ -0.68
KCNMA1-288ENST00000640773 ZNF530Q6P9A1 599 aaPredicted RBP10.81□□□□□ -0.68
KCNMA1-288ENST00000640773 NEUROD2Q15784 382 aa10.81□□□□□ -0.68
KCNMA1-288ENST00000640773 ZNF771Q7L3S4 317 aaPredicted RBP10.81□□□□□ -0.68
KCNMA1-288ENST00000640773 DDX54Q8TDD1 881 aaKnown RBP10.81□□□□□ -0.68
KCNMA1-288ENST00000640773 CIZ1Q9ULV3 898 aaPredicted RBP10.81□□□□□ -0.68
KCNMA1-288ENST00000640773 CLGNO14967 610 aa10.8□□□□□ -0.68
KCNMA1-288ENST00000640773 KCNJ4P48050 445 aa10.8□□□□□ -0.68
KCNMA1-288ENST00000640773 TSPYL1Q9H0U9 437 aa10.8□□□□□ -0.68
KCNMA1-288ENST00000640773 ANKRD31Q8N7Z5 1873 aa10.8□□□□□ -0.68
KCNMA1-288ENST00000640773 U2AF1L5P0DN76 240 aaPredicted RBP10.8□□□□□ -0.68
KCNMA1-288ENST00000640773 U2AF1Q01081 240 aaKnown RBP eCLIP10.8□□□□□ -0.68
KCNMA1-288ENST00000640773 YY1AP1Q9H869 796 aa10.8□□□□□ -0.68
KCNMA1-288ENST00000640773 DDIT3P35638 169 aa10.79□□□□□ -0.68
KCNMA1-288ENST00000640773 GABPB1Q06547 395 aaPredicted RBP10.79□□□□□ -0.68
KCNMA1-288ENST00000640773 LRP10Q7Z4F1 713 aa10.79□□□□□ -0.68
KCNMA1-288ENST00000640773 DEFB132Q7Z7B7 95 aa10.79□□□□□ -0.68
KCNMA1-288ENST00000640773 TXNRD1Q16881 649 aa10.79□□□□□ -0.68
KCNMA1-288ENST00000640773 SAMD1Q6SPF0 538 aaPredicted RBP10.79□□□□□ -0.68
KCNMA1-288ENST00000640773 SGIP1Q9BQI5 828 aa10.79□□□□□ -0.68
KCNMA1-288ENST00000640773 EN1Q05925 392 aaPredicted RBP10.79□□□□□ -0.68
KCNMA1-288ENST00000640773 TRMT2AQ8IZ69 625 aaKnown RBP10.79□□□□□ -0.68
KCNMA1-288ENST00000640773 CCDC39Q9UFE4 941 aa10.79□□□□□ -0.68
KCNMA1-288ENST00000640773 ASAP1Q9ULH1 1129 aa10.79□□□□□ -0.68
KCNMA1-288ENST00000640773 CNTNAP4Q9C0A0 1308 aa10.79□□□□□ -0.68
KCNMA1-288ENST00000640773 RC3H1Q5TC82 1133 aaKnown RBP10.78□□□□□ -0.68
KCNMA1-288ENST00000640773 MPRIPQ6WCQ1 1025 aa10.78□□□□□ -0.68
KCNMA1-288ENST00000640773 NFATC2IPQ8NCF5 419 aa10.78□□□□□ -0.68
KCNMA1-288ENST00000640773 E9PSI1 815 aa10.78□□□□□ -0.68
KCNMA1-288ENST00000640773 ITPK1Q13572 414 aa10.78□□□□□ -0.68
KCNMA1-288ENST00000640773 AMIGO3Q86WK7 504 aa10.78□□□□□ -0.68
KCNMA1-288ENST00000640773 SPRYD3Q8NCJ5 442 aa10.78□□□□□ -0.68
KCNMA1-288ENST00000640773 FEZ1Q99689 392 aa10.78□□□□□ -0.68
KCNMA1-288ENST00000640773 CHL1O00533 1208 aa10.78□□□□□ -0.68
KCNMA1-288ENST00000640773 APBA3O96018 575 aa10.78□□□□□ -0.68
KCNMA1-288ENST00000640773 TIGD1Q96MW7 591 aa10.78□□□□□ -0.68
KCNMA1-288ENST00000640773 IL16Q14005 1332 aa10.78□□□□□ -0.68
KCNMA1-288ENST00000640773 ZNF445P59923 1031 aa10.77□□□□□ -0.68
KCNMA1-288ENST00000640773 ACSBG1Q96GR2 724 aa10.77□□□□□ -0.68
KCNMA1-288ENST00000640773 DDX60Q8IY21 1712 aaKnown RBP10.77□□□□□ -0.69
KCNMA1-288ENST00000640773 NGEFQ8N5V2 710 aa10.77□□□□□ -0.69
KCNMA1-288ENST00000640773 TNPO1Q92973 898 aaKnown RBP10.77□□□□□ -0.69
KCNMA1-288ENST00000640773 TULP2O00295 520 aa10.77□□□□□ -0.69
KCNMA1-288ENST00000640773 BAG6P46379 1132 aa10.77□□□□□ -0.69
KCNMA1-288ENST00000640773 ZNF827Q17R98 1081 aa10.77□□□□□ -0.69
KCNMA1-288ENST00000640773 AXDND1Q5T1B0 1012 aaPredicted RBP10.77□□□□□ -0.69
KCNMA1-288ENST00000640773 CCDC146Q8IYE0 955 aa10.77□□□□□ -0.69
KCNMA1-288ENST00000640773 SMARCC1Q92922 1105 aaPredicted RBP10.77□□□□□ -0.69
KCNMA1-288ENST00000640773 KIF3AQ9Y496 699 aa10.77□□□□□ -0.69
KCNMA1-288ENST00000640773 GEMIN8Q9NWZ8 242 aaKnown RBP10.76□□□□□ -0.69
KCNMA1-288ENST00000640773 INTS5Q6P9B9 1019 aaKnown RBP10.76□□□□□ -0.69
KCNMA1-288ENST00000640773 PDCL2Q8N4E4 241 aa10.76□□□□□ -0.69
KCNMA1-288ENST00000640773 LINC00116Q8NCU8 138 aa10.76□□□□□ -0.69
KCNMA1-288ENST00000640773 KLHL40Q2TBA0 621 aa10.75□□□□□ -0.69
KCNMA1-288ENST00000640773 ZNF790Q6PG37 636 aa10.75□□□□□ -0.69
KCNMA1-288ENST00000640773 HDAC5Q9UQL6 1122 aa10.75□□□□□ -0.69
KCNMA1-288ENST00000640773 ARFGEF1Q9Y6D6 1849 aa10.75□□□□□ -0.69
KCNMA1-288ENST00000640773 RGL2O15211 777 aa10.75□□□□□ -0.69
KCNMA1-288ENST00000640773 C1orf141Q5JVX7 400 aa10.75□□□□□ -0.69
KCNMA1-288ENST00000640773 HSCBQ8IWL3 235 aa10.75□□□□□ -0.69
KCNMA1-288ENST00000640773 PNPLA7Q6ZV29 1317 aa10.75□□□□□ -0.69
KCNMA1-288ENST00000640773 LOC102724428A0A0B4J2F2 783 aa10.75□□□□□ -0.69
KCNMA1-288ENST00000640773 PSEN1P49768 467 aa10.75□□□□□ -0.69
KCNMA1-288ENST00000640773 SIK1P57059 783 aa10.75□□□□□ -0.69
KCNMA1-288ENST00000640773 RAB3GAP1Q15042 981 aa10.75□□□□□ -0.69
KCNMA1-288ENST00000640773 TMOD3Q9NYL9 352 aa10.75□□□□□ -0.69
KCNMA1-288ENST00000640773 KAT6BQ8WYB5 2073 aa10.74□□□□□ -0.69
KCNMA1-288ENST00000640773 KIAA2012Q0VF49 1180 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms