RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 COLQQ9Y215 455 aaPredicted RBP6.57□□□□□ -1.36
LINC00550-201ENST00000629293 ABCC6O95255 1503 aa6.57□□□□□ -1.36
LINC00550-201ENST00000629293 PALLDQ8WX93 1383 aa6.57□□□□□ -1.36
LINC00550-201ENST00000629293 SMG6Q86US8 1419 aaKnown RBP6.57□□□□□ -1.36
LINC00550-201ENST00000629293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.57□□□□□ -1.36
LINC00550-201ENST00000629293 KCTD17Q8N5Z5 321 aa6.57□□□□□ -1.36
LINC00550-201ENST00000629293 TESK2Q96S53 571 aa6.57□□□□□ -1.36
LINC00550-201ENST00000629293 CHD4Q14839 1912 aa6.57□□□□□ -1.36
LINC00550-201ENST00000629293 CYP27B1O15528 508 aa6.56□□□□□ -1.36
LINC00550-201ENST00000629293 AMIGO3Q86WK7 504 aa6.56□□□□□ -1.36
LINC00550-201ENST00000629293 LTN1O94822 1766 aa6.56□□□□□ -1.36
LINC00550-201ENST00000629293 NHSQ6T4R5 1651 aa6.56□□□□□ -1.36
LINC00550-201ENST00000629293 CLK2P49760 499 aaKnown RBP6.56□□□□□ -1.36
LINC00550-201ENST00000629293 TBC1D2Q9BYX2 928 aa6.56□□□□□ -1.36
LINC00550-201ENST00000629293 PCDH11XQ9BZA7 1347 aa6.56□□□□□ -1.36
LINC00550-201ENST00000629293 PCDH11YQ9BZA8 1340 aa6.56□□□□□ -1.36
LINC00550-201ENST00000629293 EPAS1Q99814 870 aa6.56□□□□□ -1.36
LINC00550-201ENST00000629293 RGPD3A6NKT7 1758 aaPredicted RBP6.55□□□□□ -1.36
LINC00550-201ENST00000629293 RGPD4Q7Z3J3 1758 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 POM121CA8CG34 1229 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 PIGBQ92521 554 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 TMOD3Q9NYL9 352 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 BCS1LQ9Y276 419 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 IGSF1Q8N6C5 1336 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 ATP10DQ9P241 1426 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 WNK3Q9BYP7 1800 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 NSD2O96028 1365 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 MAP3K5Q99683 1374 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 ATP6V1AP38606 617 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 CNGB1Q14028 1251 aaPredicted RBP6.55□□□□□ -1.36
LINC00550-201ENST00000629293 ADAMTS19Q8TE59 1207 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 PCDH10Q9P2E7 1040 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 ASAP1Q9ULH1 1129 aa6.55□□□□□ -1.36
LINC00550-201ENST00000629293 TUSC1Q2TAM9 212 aa6.54□□□□□ -1.36
LINC00550-201ENST00000629293 PADI6Q6TGC4 694 aa6.54□□□□□ -1.36
LINC00550-201ENST00000629293 LOC102724428A0A0B4J2F2 783 aa6.54□□□□□ -1.36
LINC00550-201ENST00000629293 SIK1P57059 783 aa6.54□□□□□ -1.36
LINC00550-201ENST00000629293 FLAD1Q8NFF5 587 aa6.54□□□□□ -1.36
LINC00550-201ENST00000629293 SMARCC1Q92922 1105 aaPredicted RBP6.54□□□□□ -1.36
LINC00550-201ENST00000629293 MON2Q7Z3U7 1717 aa6.54□□□□□ -1.36
LINC00550-201ENST00000629293 MMP10P09238 476 aa6.54□□□□□ -1.36
LINC00550-201ENST00000629293 SPG7Q9UQ90 795 aa6.54□□□□□ -1.36
LINC00550-201ENST00000629293 CD2APQ9Y5K6 639 aa6.54□□□□□ -1.36
LINC00550-201ENST00000629293 FLT4P35916 1363 aa6.53□□□□□ -1.36
LINC00550-201ENST00000629293 CGNL1Q0VF96 1302 aa6.53□□□□□ -1.36
LINC00550-201ENST00000629293 PTCD1O75127 700 aaKnown RBP6.53□□□□□ -1.36
LINC00550-201ENST00000629293 LINC00116Q8NCU8 138 aa6.53□□□□□ -1.36
LINC00550-201ENST00000629293 A0A0G2JLW4 131 aa6.53□□□□□ -1.36
LINC00550-201ENST00000629293 ARHGAP27Q6ZUM4 889 aa6.53□□□□□ -1.36
LINC00550-201ENST00000629293 SLAIN1Q8ND83 568 aa6.53□□□□□ -1.36
LINC00550-201ENST00000629293 DOT1LQ8TEK3 1739 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 PAPPAQ13219 1627 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 C3orf80F5H4A9 247 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 MAP3K7O43318 606 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 CDCA8Q53HL2 280 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 SPIRE2Q8WWL2 714 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 EYA1Q99502 592 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 CARD14Q9BXL6 1004 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 ITPK1Q13572 414 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 PUS7Q96PZ0 661 aaKnown RBP6.52□□□□□ -1.37
LINC00550-201ENST00000629293 NSD3Q9BZ95 1437 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 GDPD2Q9HCC8 539 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 FAM198AQ9UFP1 575 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 ZNF330Q9Y3S2 320 aaPredicted RBP6.52□□□□□ -1.37
LINC00550-201ENST00000629293 INSRP06213 1382 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 RGPD2P0DJD1 1756 aa6.52□□□□□ -1.37
LINC00550-201ENST00000629293 HSPA6P17066 643 aa6.51□□□□□ -1.37
LINC00550-201ENST00000629293 ZNF428Q96B54 188 aa6.51□□□□□ -1.37
LINC00550-201ENST00000629293 MTMR7Q9Y216 660 aa6.51□□□□□ -1.37
LINC00550-201ENST00000629293 RTL1A6NKG5 1358 aa6.51□□□□□ -1.37
LINC00550-201ENST00000629293 IFFO2Q5TF58 517 aa6.51□□□□□ -1.37
LINC00550-201ENST00000629293 IFNL2Q8IZJ0 200 aa6.51□□□□□ -1.37
LINC00550-201ENST00000629293 RBM27Q9P2N5 1060 aaKnown RBP6.51□□□□□ -1.37
LINC00550-201ENST00000629293 RTCBQ9Y3I0 505 aaKnown RBP6.51□□□□□ -1.37
LINC00550-201ENST00000629293 RFC4P35249 363 aa6.51□□□□□ -1.37
LINC00550-201ENST00000629293 TRAPPC3LQ5T215 181 aa6.51□□□□□ -1.37
LINC00550-201ENST00000629293 CCDC97Q96F63 343 aaPredicted RBP6.51□□□□□ -1.37
LINC00550-201ENST00000629293 SSFA2P28290 1259 aa6.5□□□□□ -1.37
LINC00550-201ENST00000629293 HTRA3P83110 453 aa6.5□□□□□ -1.37
LINC00550-201ENST00000629293 QPCTQ16769 361 aa6.5□□□□□ -1.37
LINC00550-201ENST00000629293 ZNF530Q6P9A1 599 aaPredicted RBP6.5□□□□□ -1.37
LINC00550-201ENST00000629293 SPTLC1O15269 473 aa6.5□□□□□ -1.37
LINC00550-201ENST00000629293 OATP04181 439 aa6.5□□□□□ -1.37
LINC00550-201ENST00000629293 PHKG2P15735 406 aa6.5□□□□□ -1.37
LINC00550-201ENST00000629293 NMRK2Q9NPI5 230 aa6.5□□□□□ -1.37
LINC00550-201ENST00000629293 ATG3Q9NT62 314 aa6.5□□□□□ -1.37
LINC00550-201ENST00000629293 CD46P15529 392 aa6.49□□□□□ -1.37
LINC00550-201ENST00000629293 CABP4P57796 275 aa6.49□□□□□ -1.37
LINC00550-201ENST00000629293 DDX10Q13206 875 aaKnown RBP6.49□□□□□ -1.37
LINC00550-201ENST00000629293 EIF4A2Q14240 407 aaKnown RBP6.49□□□□□ -1.37
LINC00550-201ENST00000629293 TMEM259Q4ZIN3 620 aa6.49□□□□□ -1.37
LINC00550-201ENST00000629293 TYW1BQ6NUM6 668 aa6.49□□□□□ -1.37
LINC00550-201ENST00000629293 C16orf71Q8IYS4 520 aaPredicted RBP6.49□□□□□ -1.37
LINC00550-201ENST00000629293 GLMNQ92990 594 aa6.49□□□□□ -1.37
LINC00550-201ENST00000629293 POLKQ9UBT6 870 aa6.49□□□□□ -1.37
LINC00550-201ENST00000629293 PARP3Q9Y6F1 533 aa6.49□□□□□ -1.37
LINC00550-201ENST00000629293 DPEP1P16444 411 aa6.49□□□□□ -1.37
LINC00550-201ENST00000629293 HMGB2P26583 209 aaKnown RBP6.49□□□□□ -1.37
LINC00550-201ENST00000629293 FOSBP53539 338 aa6.49□□□□□ -1.37
LINC00550-201ENST00000629293 RSBN1LQ6PCB5 846 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms