RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 GPR37L1O60883 481 aa10.4□□□□□ -0.75
SMN2-214ENST00000626847 SEMA3FQ13275 785 aa10.4□□□□□ -0.75
SMN2-214ENST00000626847 DEFB132Q7Z7B7 95 aa10.4□□□□□ -0.75
SMN2-214ENST00000626847 AEBP1Q8IUX7 1158 aa10.4□□□□□ -0.75
SMN2-214ENST00000626847 EXOC8Q8IYI6 725 aa10.4□□□□□ -0.75
SMN2-214ENST00000626847 CAMSAP2Q08AD1 1489 aa10.39□□□□□ -0.75
SMN2-214ENST00000626847 MAST1Q9Y2H9 1570 aa10.39□□□□□ -0.75
SMN2-214ENST00000626847 CALRP27797 417 aaKnown RBP10.39□□□□□ -0.75
SMN2-214ENST00000626847 SOX11P35716 441 aa10.39□□□□□ -0.75
SMN2-214ENST00000626847 ZKSCAN8Q15776 578 aaPredicted RBP10.39□□□□□ -0.75
SMN2-214ENST00000626847 NBPF10Q6P3W6 841 aaKnown RBP10.39□□□□□ -0.75
SMN2-214ENST00000626847 BRINP3Q76B58 766 aa10.39□□□□□ -0.75
SMN2-214ENST00000626847 USB1Q9BQ65 265 aaKnown RBP10.39□□□□□ -0.75
SMN2-214ENST00000626847 HPS5Q9UPZ3 1129 aa10.39□□□□□ -0.75
SMN2-214ENST00000626847 BLMP54132 1417 aaPredicted RBP10.38□□□□□ -0.75
SMN2-214ENST00000626847 BCL9LQ86UU0 1499 aa10.38□□□□□ -0.75
SMN2-214ENST00000626847 LMOD3Q0VAK6 560 aa10.38□□□□□ -0.75
SMN2-214ENST00000626847 NBPF6Q5VWK0 638 aa10.38□□□□□ -0.75
SMN2-214ENST00000626847 NBPF5PQ86XG9 351 aaPredicted RBP10.38□□□□□ -0.75
SMN2-214ENST00000626847 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMN2-214ENST00000626847 PBXIP1Q96AQ6 731 aa10.38□□□□□ -0.75
SMN2-214ENST00000626847 NBPF4Q96M43 638 aa10.38□□□□□ -0.75
SMN2-214ENST00000626847 TRPC5Q9UL62 973 aaPredicted RBP10.38□□□□□ -0.75
SMN2-214ENST00000626847 NCOA3Q9Y6Q9 1424 aa10.38□□□□□ -0.75
SMN2-214ENST00000626847 CCNB3Q8WWL7 1395 aa10.37□□□□□ -0.75
SMN2-214ENST00000626847 MAP2K1Q02750 393 aaPredicted RBP10.37□□□□□ -0.75
SMN2-214ENST00000626847 BLOC1S3Q6QNY0 202 aa10.37□□□□□ -0.75
SMN2-214ENST00000626847 LYPD8Q6UX82 237 aa10.37□□□□□ -0.75
SMN2-214ENST00000626847 RNF19BQ6ZMZ0 732 aa10.37□□□□□ -0.75
SMN2-214ENST00000626847 TSHZ1Q6ZSZ6 1077 aa10.37□□□□□ -0.75
SMN2-214ENST00000626847 PPP1R12CQ9BZL4 782 aa10.37□□□□□ -0.75
SMN2-214ENST00000626847 ALG2Q9H553 416 aa10.37□□□□□ -0.75
SMN2-214ENST00000626847 USP21Q9UK80 565 aa10.37□□□□□ -0.75
SMN2-214ENST00000626847 PCDHB3Q9Y5E6 796 aa10.37□□□□□ -0.75
SMN2-214ENST00000626847 CFAP65Q6ZU64 1925 aaKnown RBP10.36□□□□□ -0.75
SMN2-214ENST00000626847 PNPLA6Q8IY17 1366 aa10.36□□□□□ -0.75
SMN2-214ENST00000626847 SOWAHBA6NEL2 793 aa10.36□□□□□ -0.75
SMN2-214ENST00000626847 ADAMTS2O95450 1211 aa10.36□□□□□ -0.75
SMN2-214ENST00000626847 FMNL1O95466 1100 aaPredicted RBP10.36□□□□□ -0.75
SMN2-214ENST00000626847 ZSCAN20P17040 1043 aaPredicted RBP10.36□□□□□ -0.75
SMN2-214ENST00000626847 EIF4G2P78344 907 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMN2-214ENST00000626847 ATRNO75882 1429 aa10.36□□□□□ -0.75
SMN2-214ENST00000626847 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.35□□□□□ -0.75
SMN2-214ENST00000626847 NR1I2O75469 434 aa10.35□□□□□ -0.75
SMN2-214ENST00000626847 TMTC2Q8N394 836 aa10.35□□□□□ -0.75
SMN2-214ENST00000626847 MKL1Q969V6 931 aa10.35□□□□□ -0.75
SMN2-214ENST00000626847 ZNF775Q96BV0 537 aaPredicted RBP10.35□□□□□ -0.75
SMN2-214ENST00000626847 TSR3Q9UJK0 312 aaKnown RBP10.35□□□□□ -0.75
SMN2-214ENST00000626847 CASKIN1Q8WXD9 1431 aa10.35□□□□□ -0.75
SMN2-214ENST00000626847 PIK3C2BO00750 1634 aa10.35□□□□□ -0.75
SMN2-214ENST00000626847 GOLIM4O00461 696 aa10.34□□□□□ -0.75
SMN2-214ENST00000626847 HRO43593 1189 aa10.34□□□□□ -0.75
SMN2-214ENST00000626847 ATF3P18847 181 aa10.34□□□□□ -0.75
SMN2-214ENST00000626847 LMOD1P29536 600 aaPredicted RBP10.34□□□□□ -0.75
SMN2-214ENST00000626847 BCAMP50895 628 aa10.34□□□□□ -0.75
SMN2-214ENST00000626847 CTR9Q6PD62 1173 aa10.34□□□□□ -0.75
SMN2-214ENST00000626847 SCUBE3Q8IX30 993 aa10.34□□□□□ -0.75
SMN2-214ENST00000626847 FAM177A1Q8N128 213 aaPredicted RBP10.34□□□□□ -0.75
SMN2-214ENST00000626847 LRRC59Q96AG4 307 aaKnown RBP10.34□□□□□ -0.75
SMN2-214ENST00000626847 CCDC94Q9BW85 323 aaPredicted RBP10.34□□□□□ -0.75
SMN2-214ENST00000626847 C19orf44Q9H6X5 657 aa10.34□□□□□ -0.75
SMN2-214ENST00000626847 ISY1Q9ULR0 285 aaKnown RBP10.34□□□□□ -0.75
SMN2-214ENST00000626847 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.34□□□□□ -0.75
SMN2-214ENST00000626847 PALM3A6NDB9 673 aaPredicted RBP10.33□□□□□ -0.76
SMN2-214ENST00000626847 ESPNB1AK53 854 aa10.33□□□□□ -0.76
SMN2-214ENST00000626847 APLP1P51693 650 aa10.33□□□□□ -0.76
SMN2-214ENST00000626847 HDAC1Q13547 482 aaPredicted RBP10.33□□□□□ -0.76
SMN2-214ENST00000626847 CFAP70Q5T0N1 1121 aa10.33□□□□□ -0.76
SMN2-214ENST00000626847 BRICD5Q6PL45 260 aa10.33□□□□□ -0.76
SMN2-214ENST00000626847 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.33□□□□□ -0.76
SMN2-214ENST00000626847 WNT2BQ93097 391 aa10.33□□□□□ -0.76
SMN2-214ENST00000626847 ASXL1Q8IXJ9 1541 aa10.33□□□□□ -0.76
SMN2-214ENST00000626847 MROH1Q8NDA8 1641 aa10.33□□□□□ -0.76
SMN2-214ENST00000626847 CCDC66A2RUB6 948 aa10.33□□□□□ -0.76
SMN2-214ENST00000626847 CSB-PGBD3P0DP91 1061 aa10.33□□□□□ -0.76
SMN2-214ENST00000626847 NFKBIBQ15653 356 aa10.33□□□□□ -0.76
SMN2-214ENST00000626847 ZNF787Q6DD87 383 aa10.33□□□□□ -0.76
SMN2-214ENST00000626847 DCAF11Q8TEB1 546 aa10.33□□□□□ -0.76
SMN2-214ENST00000626847 TFIP11Q9UBB9 837 aaKnown RBP10.33□□□□□ -0.76
SMN2-214ENST00000626847 EFCAB6Q5THR3 1501 aa10.32□□□□□ -0.76
SMN2-214ENST00000626847 CHD2O14647 1828 aaKnown RBP10.32□□□□□ -0.76
SMN2-214ENST00000626847 CCER2I3L3R5 266 aa10.32□□□□□ -0.76
SMN2-214ENST00000626847 RINLQ6ZS11 566 aa10.32□□□□□ -0.76
SMN2-214ENST00000626847 CEP83Q9Y592 693 aa10.32□□□□□ -0.76
SMN2-214ENST00000626847 CCDC141Q6ZP82 1450 aa10.31□□□□□ -0.76
SMN2-214ENST00000626847 DYNC1I1O14576 645 aa10.31□□□□□ -0.76
SMN2-214ENST00000626847 LCE2BO14633 110 aa10.31□□□□□ -0.76
SMN2-214ENST00000626847 CTHP32929 405 aa10.31□□□□□ -0.76
SMN2-214ENST00000626847 NR1H3Q13133 447 aa10.31□□□□□ -0.76
SMN2-214ENST00000626847 FEZ2Q9UHY8 353 aaPredicted RBP10.31□□□□□ -0.76
SMN2-214ENST00000626847 FKBPLQ9UIM3 349 aa10.31□□□□□ -0.76
SMN2-214ENST00000626847 CEP152O94986 1710 aa10.3□□□□□ -0.76
SMN2-214ENST00000626847 ZNF500O60304 480 aaPredicted RBP10.3□□□□□ -0.76
SMN2-214ENST00000626847 JUNDP17535 347 aa10.3□□□□□ -0.76
SMN2-214ENST00000626847 ARID4AP29374 1257 aaPredicted RBP10.3□□□□□ -0.76
SMN2-214ENST00000626847 SF3B2Q13435 895 aaKnown RBP10.3□□□□□ -0.76
SMN2-214ENST00000626847 MYCBPQ99417 103 aaPredicted RBP10.3□□□□□ -0.76
SMN2-214ENST00000626847 ARHGAP31Q2M1Z3 1444 aa10.3□□□□□ -0.76
SMN2-214ENST00000626847 ZBBXA8MT70 800 aa10.29□□□□□ -0.76
SMN2-214ENST00000626847 KIF1CO43896 1103 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms