RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CASTP20810 708 aaKnown RBP13.57□□□□□ -0.24
VARS2-213ENST00000625423 XPCQ01831 940 aaPredicted RBP13.57□□□□□ -0.24
VARS2-213ENST00000625423 PTH1RQ03431 593 aa13.57□□□□□ -0.24
VARS2-213ENST00000625423 KDM3BQ7LBC6 1761 aa13.56□□□□□ -0.24
VARS2-213ENST00000625423 AMOTQ4VCS5 1084 aa13.56□□□□□ -0.24
VARS2-213ENST00000625423 ECHDC1Q9NTX5 307 aa13.56□□□□□ -0.24
VARS2-213ENST00000625423 TPRNQ4KMQ1 711 aa13.56□□□□□ -0.24
VARS2-213ENST00000625423 KSR2Q6VAB6 950 aa13.56□□□□□ -0.24
VARS2-213ENST00000625423 PXDNQ92626 1479 aa13.56□□□□□ -0.24
VARS2-213ENST00000625423 OFD1O75665 1012 aa13.55□□□□□ -0.24
VARS2-213ENST00000625423 ALDH1L1O75891 902 aa13.55□□□□□ -0.24
VARS2-213ENST00000625423 IFIT2P09913 472 aaKnown RBP13.55□□□□□ -0.24
VARS2-213ENST00000625423 CNPY2Q9Y2B0 182 aa13.55□□□□□ -0.24
VARS2-213ENST00000625423 DTNBO60941 627 aa13.55□□□□□ -0.24
VARS2-213ENST00000625423 GCP02774 474 aa13.55□□□□□ -0.24
VARS2-213ENST00000625423 ZSCAN22P10073 491 aaPredicted RBP13.55□□□□□ -0.24
VARS2-213ENST00000625423 SYT1P21579 422 aa13.55□□□□□ -0.24
VARS2-213ENST00000625423 RUFY2Q8WXA3 655 aa13.55□□□□□ -0.24
VARS2-213ENST00000625423 STX6O43752 255 aa13.55□□□□□ -0.24
VARS2-213ENST00000625423 LARGE1O95461 756 aa13.55□□□□□ -0.24
VARS2-213ENST00000625423 ADCK5Q3MIX3 580 aa13.55□□□□□ -0.24
VARS2-213ENST00000625423 PRPF40BQ6NWY9 871 aaKnown RBP13.55□□□□□ -0.24
VARS2-213ENST00000625423 SMC3Q9UQE7 1217 aa13.55□□□□□ -0.24
VARS2-213ENST00000625423 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.55□□□□□ -0.24
VARS2-213ENST00000625423 AACSQ86V21 672 aa13.54□□□□□ -0.24
VARS2-213ENST00000625423 ARHGEF25Q86VW2 580 aa13.54□□□□□ -0.24
VARS2-213ENST00000625423 ANKRD24Q8TF21 1146 aa13.54□□□□□ -0.24
VARS2-213ENST00000625423 GPATCH3Q96I76 525 aa13.54□□□□□ -0.24
VARS2-213ENST00000625423 JAKMIP1Q96N16 626 aaKnown RBP13.54□□□□□ -0.24
VARS2-213ENST00000625423 HYPKQ9NX55 129 aa13.54□□□□□ -0.24
VARS2-213ENST00000625423 RGPD2P0DJD1 1756 aa13.54□□□□□ -0.24
VARS2-213ENST00000625423 AIMP1Q12904 312 aaKnown RBP13.54□□□□□ -0.24
VARS2-213ENST00000625423 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.54□□□□□ -0.24
VARS2-213ENST00000625423 PHF14O94880 888 aa13.53□□□□□ -0.24
VARS2-213ENST00000625423 ERC1Q8IUD2 1116 aa13.53□□□□□ -0.24
VARS2-213ENST00000625423 CCDC83Q8IWF9 413 aa13.53□□□□□ -0.24
VARS2-213ENST00000625423 TMEM87AQ8NBN3 555 aa13.53□□□□□ -0.24
VARS2-213ENST00000625423 DDX54Q8TDD1 881 aaKnown RBP13.53□□□□□ -0.24
VARS2-213ENST00000625423 SUCLG2Q96I99 432 aa13.53□□□□□ -0.24
VARS2-213ENST00000625423 ORAI2Q96SN7 254 aa13.53□□□□□ -0.24
VARS2-213ENST00000625423 ZKSCAN5Q9Y2L8 839 aa13.53□□□□□ -0.24
VARS2-213ENST00000625423 ZNF500O60304 480 aaPredicted RBP13.53□□□□□ -0.24
VARS2-213ENST00000625423 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.53□□□□□ -0.24
VARS2-213ENST00000625423 PDRG1Q9NUG6 133 aa13.53□□□□□ -0.24
VARS2-213ENST00000625423 ADGRL3Q9HAR2 1447 aa13.53□□□□□ -0.24
VARS2-213ENST00000625423 TPM2P07951 284 aa13.52□□□□□ -0.24
VARS2-213ENST00000625423 LMO7Q8WWI1 1683 aa13.52□□□□□ -0.24
VARS2-213ENST00000625423 F13A1P00488 732 aa13.52□□□□□ -0.25
VARS2-213ENST00000625423 EVI5LQ96CN4 794 aa13.52□□□□□ -0.25
VARS2-213ENST00000625423 KAZALD1Q96I82 304 aa13.52□□□□□ -0.25
VARS2-213ENST00000625423 BICC1Q9H694 974 aaKnown RBP13.52□□□□□ -0.25
VARS2-213ENST00000625423 CCDC39Q9UFE4 941 aa13.52□□□□□ -0.25
VARS2-213ENST00000625423 HEG1Q9ULI3 1381 aa13.52□□□□□ -0.25
VARS2-213ENST00000625423 GRM8O00222 908 aa13.52□□□□□ -0.25
VARS2-213ENST00000625423 LINS1Q8NG48 757 aa13.52□□□□□ -0.25
VARS2-213ENST00000625423 AXIN2Q9Y2T1 843 aa13.52□□□□□ -0.25
VARS2-213ENST00000625423 CRYBG1Q9Y4K1 1723 aa13.51□□□□□ -0.25
VARS2-213ENST00000625423 SASH1O94885 1247 aa13.51□□□□□ -0.25
VARS2-213ENST00000625423 GJB2P29033 226 aa13.51□□□□□ -0.25
VARS2-213ENST00000625423 HSP90AA2PQ14568 343 aaPredicted RBP13.51□□□□□ -0.25
VARS2-213ENST00000625423 VPS53Q5VIR6 699 aa13.51□□□□□ -0.25
VARS2-213ENST00000625423 EAF2Q96CJ1 260 aaPredicted RBP13.51□□□□□ -0.25
VARS2-213ENST00000625423 FAM227BQ96M60 508 aa13.51□□□□□ -0.25
VARS2-213ENST00000625423 CCDC8Q9H0W5 538 aaPredicted RBP13.51□□□□□ -0.25
VARS2-213ENST00000625423 ZSWIM6Q9HCJ5 1215 aa13.51□□□□□ -0.25
VARS2-213ENST00000625423 HDAC5Q9UQL6 1122 aa13.51□□□□□ -0.25
VARS2-213ENST00000625423 CYP46A1Q9Y6A2 500 aa13.51□□□□□ -0.25
VARS2-213ENST00000625423 FIBPO43427 364 aa13.51□□□□□ -0.25
VARS2-213ENST00000625423 HSPA2P54652 639 aa13.51□□□□□ -0.25
VARS2-213ENST00000625423 NCAPD2Q15021 1401 aa13.51□□□□□ -0.25
VARS2-213ENST00000625423 G3BP1Q13283 466 aaKnown RBP eCLIP13.51□□□□□ -0.251e-6■■□□□ 13
VARS2-213ENST00000625423 NECTIN1Q15223 517 aa13.51□□□□□ -0.25
VARS2-213ENST00000625423 CCDC183Q5T5S1 534 aa13.51□□□□□ -0.25
VARS2-213ENST00000625423 CCDC171Q6TFL3 1326 aa13.5□□□□□ -0.25
VARS2-213ENST00000625423 SIL1Q9H173 461 aa13.5□□□□□ -0.25
VARS2-213ENST00000625423 UBE2HP62256 183 aa13.5□□□□□ -0.25
VARS2-213ENST00000625423 KCNB2Q92953 911 aa13.5□□□□□ -0.25
VARS2-213ENST00000625423 TM6SF1Q9BZW5 370 aa13.5□□□□□ -0.25
VARS2-213ENST00000625423 DDX21Q9NR30 783 aaKnown RBP eCLIP13.5□□□□□ -0.25
VARS2-213ENST00000625423 TLR7Q9NYK1 1049 aaKnown RBP13.5□□□□□ -0.25
VARS2-213ENST00000625423 R3HCC1Q9Y3T6 440 aaKnown RBP13.5□□□□□ -0.25
VARS2-213ENST00000625423 RBM8AQ9Y5S9 174 aaKnown RBP13.5□□□□□ -0.25
VARS2-213ENST00000625423 CHD2O14647 1828 aaKnown RBP13.49□□□□□ -0.25
VARS2-213ENST00000625423 DDX58O95786 925 aaKnown RBP13.49□□□□□ -0.25
VARS2-213ENST00000625423 PTMAP06454 111 aaKnown RBP13.49□□□□□ -0.25
VARS2-213ENST00000625423 KCNJ4P48050 445 aa13.49□□□□□ -0.25
VARS2-213ENST00000625423 NMIQ13287 307 aaPredicted RBP13.49□□□□□ -0.25
VARS2-213ENST00000625423 PROSER2Q86WR7 435 aaPredicted RBP13.49□□□□□ -0.25
VARS2-213ENST00000625423 UBE2Q2Q8WVN8 375 aa13.49□□□□□ -0.25
VARS2-213ENST00000625423 ZKSCAN1P17029 563 aaPredicted RBP13.49□□□□□ -0.25
VARS2-213ENST00000625423 PDIA6Q15084 440 aa13.49□□□□□ -0.25
VARS2-213ENST00000625423 ME3Q16798 604 aa13.49□□□□□ -0.25
VARS2-213ENST00000625423 CREB3L3Q68CJ9 461 aa13.49□□□□□ -0.25
VARS2-213ENST00000625423 ZSCAN31Q96LW9 406 aaPredicted RBP13.49□□□□□ -0.25
VARS2-213ENST00000625423 MTMR6Q9Y217 621 aa13.49□□□□□ -0.25
VARS2-213ENST00000625423 ATP6V1DQ9Y5K8 247 aa13.49□□□□□ -0.25
VARS2-213ENST00000625423 RRP9O43818 475 aaKnown RBP13.49□□□□□ -0.25
VARS2-213ENST00000625423 MCM5P33992 734 aa13.49□□□□□ -0.25
VARS2-213ENST00000625423 ST3GAL1Q11201 340 aa13.49□□□□□ -0.25
VARS2-213ENST00000625423 SLC39A6Q13433 755 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 233.8 ms