RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CCT4P50991 539 aaKnown RBP22.54■■□□□ 1.2
PTCHD3-202ENST00000622555 TXNRD1Q16881 649 aa22.54■■□□□ 1.2
PTCHD3-202ENST00000622555 RC3H1Q5TC82 1133 aaKnown RBP22.54■■□□□ 1.2
PTCHD3-202ENST00000622555 PLBD2Q8NHP8 589 aa22.54■■□□□ 1.2
PTCHD3-202ENST00000622555 ARXQ96QS3 562 aa22.54■■□□□ 1.2
PTCHD3-202ENST00000622555 EIF5P55010 431 aaKnown RBP22.53■■□□□ 1.2
PTCHD3-202ENST00000622555 KIF6Q6ZMV9 814 aa22.53■■□□□ 1.2
PTCHD3-202ENST00000622555 PROM2Q8N271 834 aa22.51■■□□□ 1.19
PTCHD3-202ENST00000622555 ZBTB3Q9H5J0 574 aa22.51■■□□□ 1.19
PTCHD3-202ENST00000622555 SF3B2Q13435 895 aaKnown RBP22.51■■□□□ 1.19
PTCHD3-202ENST00000622555 SRCIN1Q9C0H9 1055 aa22.51■■□□□ 1.19
PTCHD3-202ENST00000622555 ATP10DQ9P241 1426 aa22.51■■□□□ 1.19
PTCHD3-202ENST00000622555 COL15A1P39059 1388 aa22.5■■□□□ 1.19
PTCHD3-202ENST00000622555 GNPATO15228 680 aa22.5■■□□□ 1.19
PTCHD3-202ENST00000622555 BEND3Q5T5X7 828 aa22.5■■□□□ 1.19
PTCHD3-202ENST00000622555 DZIP3Q86Y13 1208 aaKnown RBP22.5■■□□□ 1.19
PTCHD3-202ENST00000622555 METTL22Q9BUU2 404 aaPredicted RBP22.5■■□□□ 1.19
PTCHD3-202ENST00000622555 AFDNP55196 1824 aaKnown RBP22.5■■□□□ 1.19
PTCHD3-202ENST00000622555 HMGB2P26583 209 aaKnown RBP22.49■■□□□ 1.19
PTCHD3-202ENST00000622555 NEXNQ0ZGT2 675 aa22.49■■□□□ 1.19
PTCHD3-202ENST00000622555 AK7Q96M32 723 aa22.49■■□□□ 1.19
PTCHD3-202ENST00000622555 MAP3K15Q6ZN16 1313 aa22.49■■□□□ 1.19
PTCHD3-202ENST00000622555 RPS6KA4O75676 772 aa22.48■■□□□ 1.19
PTCHD3-202ENST00000622555 MYD88Q99836 296 aa22.48■■□□□ 1.19
PTCHD3-202ENST00000622555 CHMP4BQ9H444 224 aaKnown RBP22.48■■□□□ 1.19
PTCHD3-202ENST00000622555 TBC1D2BQ9UPU7 963 aa22.48■■□□□ 1.19
PTCHD3-202ENST00000622555 PPP4R2Q9NY27 417 aa22.48■■□□□ 1.19
PTCHD3-202ENST00000622555 NUP98P52948 1817 aa22.47■■□□□ 1.19
PTCHD3-202ENST00000622555 UBR3Q6ZT12 1888 aa22.47■■□□□ 1.19
PTCHD3-202ENST00000622555 A0A087WZG4 1122 aa22.47■■□□□ 1.19
PTCHD3-202ENST00000622555 ZBTB7BO15156 539 aaPredicted RBP22.47■■□□□ 1.19
PTCHD3-202ENST00000622555 LINS1Q8NG48 757 aa22.47■■□□□ 1.19
PTCHD3-202ENST00000622555 RTCBQ9Y3I0 505 aaKnown RBP22.47■■□□□ 1.19
PTCHD3-202ENST00000622555 EN1Q05925 392 aaPredicted RBP22.46■■□□□ 1.19
PTCHD3-202ENST00000622555 AAMPQ13685 434 aa22.46■■□□□ 1.19
PTCHD3-202ENST00000622555 ALDH1L1O75891 902 aa22.45■■□□□ 1.19
PTCHD3-202ENST00000622555 BAG6P46379 1132 aa22.45■■□□□ 1.19
PTCHD3-202ENST00000622555 CWF19L2Q2TBE0 894 aaKnown RBP22.45■■□□□ 1.19
PTCHD3-202ENST00000622555 ZBTB40Q9NUA8 1239 aa22.45■■□□□ 1.19
PTCHD3-202ENST00000622555 ANKRD36CQ5JPF3 1778 aa22.45■■□□□ 1.18
PTCHD3-202ENST00000622555 BCORQ6W2J9 1755 aa22.45■■□□□ 1.18
PTCHD3-202ENST00000622555 ERVV-1B6SEH8 477 aa22.44■■□□□ 1.18
PTCHD3-202ENST00000622555 IGKV5-2P06315 115 aa22.44■■□□□ 1.18
PTCHD3-202ENST00000622555 EZH2Q15910 746 aaKnown RBP22.44■■□□□ 1.18
PTCHD3-202ENST00000622555 SMIM5Q71RC9 77 aa22.44■■□□□ 1.18
PTCHD3-202ENST00000622555 CAMKK2Q96RR4 588 aa22.44■■□□□ 1.18
PTCHD3-202ENST00000622555 MEIS3Q99687 375 aa22.44■■□□□ 1.18
PTCHD3-202ENST00000622555 ATP5J2-PTCD1G3V325 749 aa22.43■■□□□ 1.18
PTCHD3-202ENST00000622555 HLFQ16534 295 aa22.43■■□□□ 1.18
PTCHD3-202ENST00000622555 GIGYF2Q6Y7W6 1299 aaKnown RBP22.43■■□□□ 1.18
PTCHD3-202ENST00000622555 C4AP0C0L4 1744 aa22.43■■□□□ 1.18
PTCHD3-202ENST00000622555 NEURL1BA8MQ27 555 aa22.43■■□□□ 1.18
PTCHD3-202ENST00000622555 PHF14O94880 888 aa22.43■■□□□ 1.18
PTCHD3-202ENST00000622555 AMIGO3Q86WK7 504 aa22.43■■□□□ 1.18
PTCHD3-202ENST00000622555 CAMTA2O94983 1202 aa22.42■■□□□ 1.18
PTCHD3-202ENST00000622555 TCIRG1Q13488 830 aa22.42■■□□□ 1.18
PTCHD3-202ENST00000622555 SCN7AQ01118 1682 aa22.41■■□□□ 1.18
PTCHD3-202ENST00000622555 HSP90AB3PQ58FF7 597 aa22.41■■□□□ 1.18
PTCHD3-202ENST00000622555 CCDC125Q86Z20 511 aa22.41■■□□□ 1.18
PTCHD3-202ENST00000622555 USP44Q9H0E7 712 aa22.41■■□□□ 1.18
PTCHD3-202ENST00000622555 GNAI3P08754 354 aa22.4■■□□□ 1.18
PTCHD3-202ENST00000622555 TRAPPC3LQ5T215 181 aa22.4■■□□□ 1.18
PTCHD3-202ENST00000622555 DEFB132Q7Z7B7 95 aa22.4■■□□□ 1.18
PTCHD3-202ENST00000622555 CCDC136Q96JN2 1154 aa22.4■■□□□ 1.18
PTCHD3-202ENST00000622555 C1orf115Q9H7X2 142 aa22.4■■□□□ 1.18
PTCHD3-202ENST00000622555 C9orf78Q9NZ63 289 aaPredicted RBP22.4■■□□□ 1.18
PTCHD3-202ENST00000622555 GCKRQ14397 625 aa22.4■■□□□ 1.18
PTCHD3-202ENST00000622555 ARHGEF1Q92888 912 aaKnown RBP22.4■■□□□ 1.18
PTCHD3-202ENST00000622555 TUBGCP6Q96RT7 1819 aa22.39■■□□□ 1.17
PTCHD3-202ENST00000622555 UBTFL1P0CB47 393 aaPredicted RBP22.39■■□□□ 1.17
PTCHD3-202ENST00000622555 ADRA2BP18089 450 aa22.39■■□□□ 1.17
PTCHD3-202ENST00000622555 ZNF827Q17R98 1081 aa22.39■■□□□ 1.17
PTCHD3-202ENST00000622555 B4GALNT3Q6L9W6 998 aa22.39■■□□□ 1.17
PTCHD3-202ENST00000622555 ISCA1Q9BUE6 129 aa22.39■■□□□ 1.17
PTCHD3-202ENST00000622555 IBTKQ9P2D0 1353 aaPredicted RBP22.38■■□□□ 1.17
PTCHD3-202ENST00000622555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.38■■□□□ 1.17
PTCHD3-202ENST00000622555 ZPR1O75312 459 aa22.38■■□□□ 1.17
PTCHD3-202ENST00000622555 RFC4P35249 363 aa22.38■■□□□ 1.17
PTCHD3-202ENST00000622555 PELP1Q8IZL8 1130 aaKnown RBP22.38■■□□□ 1.17
PTCHD3-202ENST00000622555 AKT1S1Q96B36 256 aa22.38■■□□□ 1.17
PTCHD3-202ENST00000622555 CWC25Q9NXE8 425 aaPredicted RBP22.38■■□□□ 1.17
PTCHD3-202ENST00000622555 NARFQ9UHQ1 456 aa22.38■■□□□ 1.17
PTCHD3-202ENST00000622555 ZNF652Q9Y2D9 606 aa22.38■■□□□ 1.17
PTCHD3-202ENST00000622555 PCDHB15Q9Y5E8 787 aa22.38■■□□□ 1.17
PTCHD3-202ENST00000622555 GRM8O00222 908 aa22.37■■□□□ 1.17
PTCHD3-202ENST00000622555 GPTP24298 496 aa22.37■■□□□ 1.17
PTCHD3-202ENST00000622555 SSFA2P28290 1259 aa22.37■■□□□ 1.17
PTCHD3-202ENST00000622555 CCDC191Q8NCU4 936 aa22.37■■□□□ 1.17
PTCHD3-202ENST00000622555 TFCP2L1Q9NZI6 479 aa22.37■■□□□ 1.17
PTCHD3-202ENST00000622555 SRP68Q9UHB9 627 aaKnown RBP22.37■■□□□ 1.17
PTCHD3-202ENST00000622555 NBPF7P0C2Y1 421 aaPredicted RBP22.37■■□□□ 1.17
PTCHD3-202ENST00000622555 GNAI2P04899 355 aa22.36■■□□□ 1.17
PTCHD3-202ENST00000622555 TRIM28Q13263 835 aaKnown RBP22.36■■□□□ 1.17
PTCHD3-202ENST00000622555 USPL1Q5W0Q7 1092 aa22.36■■□□□ 1.17
PTCHD3-202ENST00000622555 CLEC4GQ6UXB4 293 aa22.35■■□□□ 1.17
PTCHD3-202ENST00000622555 USP42Q9H9J4 1324 aaKnown RBP22.35■■□□□ 1.17
PTCHD3-202ENST00000622555 RGL2O15211 777 aa22.34■■□□□ 1.17
PTCHD3-202ENST00000622555 ZNF34Q8IZ26 560 aa22.34■■□□□ 1.17
PTCHD3-202ENST00000622555 LRRFIP2Q9Y608 721 aaKnown RBP22.34■■□□□ 1.17
PTCHD3-202ENST00000622555 UTYO14607 1347 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms