RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 TSPY26PQ9H489 355 aa14.22□□□□□ -0.13
C11orf54-215ENST00000617482 LIMCH1Q9UPQ0 1083 aa14.22□□□□□ -0.13
C11orf54-215ENST00000617482 C1orf141Q5JVX7 400 aa14.21□□□□□ -0.13
C11orf54-215ENST00000617482 SYAP1Q96A49 352 aaPredicted RBP14.21□□□□□ -0.13
C11orf54-215ENST00000617482 CHMP4AQ9BY43 222 aa14.21□□□□□ -0.13
C11orf54-215ENST00000617482 CNPY2Q9Y2B0 182 aa14.21□□□□□ -0.13
C11orf54-215ENST00000617482 RPAP1Q9BWH6 1393 aaPredicted RBP14.21□□□□□ -0.14
C11orf54-215ENST00000617482 RNMTO43148 476 aaKnown RBP14.21□□□□□ -0.14
C11orf54-215ENST00000617482 OFD1O75665 1012 aa14.21□□□□□ -0.14
C11orf54-215ENST00000617482 DDX54Q8TDD1 881 aaKnown RBP14.21□□□□□ -0.14
C11orf54-215ENST00000617482 TTC41PQ6P2S7 1318 aa14.2□□□□□ -0.14
C11orf54-215ENST00000617482 IFIT2P09913 472 aaKnown RBP14.2□□□□□ -0.14
C11orf54-215ENST00000617482 SYT1P21579 422 aa14.2□□□□□ -0.14
C11orf54-215ENST00000617482 PRPF40BQ6NWY9 871 aaKnown RBP14.2□□□□□ -0.14
C11orf54-215ENST00000617482 KCNH5Q8NCM2 988 aa14.2□□□□□ -0.14
C11orf54-215ENST00000617482 GIGYF1O75420 1035 aaPredicted RBP14.2□□□□□ -0.14
C11orf54-215ENST00000617482 LARGE1O95461 756 aa14.2□□□□□ -0.14
C11orf54-215ENST00000617482 ZSCAN22P10073 491 aaPredicted RBP14.2□□□□□ -0.14
C11orf54-215ENST00000617482 AIMP1Q12904 312 aaKnown RBP14.2□□□□□ -0.14
C11orf54-215ENST00000617482 ADCK5Q3MIX3 580 aa14.2□□□□□ -0.14
C11orf54-215ENST00000617482 ECHDC1Q9NTX5 307 aa14.2□□□□□ -0.14
C11orf54-215ENST00000617482 SMC3Q9UQE7 1217 aa14.2□□□□□ -0.14
C11orf54-215ENST00000617482 STX6O43752 255 aa14.19□□□□□ -0.14
C11orf54-215ENST00000617482 KSR2Q6VAB6 950 aa14.19□□□□□ -0.14
C11orf54-215ENST00000617482 USP42Q9H9J4 1324 aaKnown RBP14.19□□□□□ -0.14
C11orf54-215ENST00000617482 GCP02774 474 aa14.19□□□□□ -0.14
C11orf54-215ENST00000617482 MTX1Q13505 466 aa14.19□□□□□ -0.14
C11orf54-215ENST00000617482 HSP90AA2PQ14568 343 aaPredicted RBP14.19□□□□□ -0.14
C11orf54-215ENST00000617482 AACSQ86V21 672 aa14.19□□□□□ -0.14
C11orf54-215ENST00000617482 RUFY2Q8WXA3 655 aa14.19□□□□□ -0.14
C11orf54-215ENST00000617482 JAKMIP1Q96N16 626 aaKnown RBP14.19□□□□□ -0.14
C11orf54-215ENST00000617482 HYPKQ9NX55 129 aa14.19□□□□□ -0.14
C11orf54-215ENST00000617482 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.19□□□□□ -0.14
C11orf54-215ENST00000617482 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.19□□□□□ -0.14
C11orf54-215ENST00000617482 LTN1O94822 1766 aa14.19□□□□□ -0.14
C11orf54-215ENST00000617482 AMOTQ4VCS5 1084 aa14.18□□□□□ -0.14
C11orf54-215ENST00000617482 CCDC83Q8IWF9 413 aa14.18□□□□□ -0.14
C11orf54-215ENST00000617482 PHF14O94880 888 aa14.17□□□□□ -0.14
C11orf54-215ENST00000617482 PDRG1Q9NUG6 133 aa14.17□□□□□ -0.14
C11orf54-215ENST00000617482 ZKSCAN5Q9Y2L8 839 aa14.17□□□□□ -0.14
C11orf54-215ENST00000617482 ALDH1L1O75891 902 aa14.17□□□□□ -0.14
C11orf54-215ENST00000617482 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.17□□□□□ -0.14
C11orf54-215ENST00000617482 GPATCH3Q96I76 525 aa14.17□□□□□ -0.14
C11orf54-215ENST00000617482 ORAI2Q96SN7 254 aa14.17□□□□□ -0.14
C11orf54-215ENST00000617482 RGPD2P0DJD1 1756 aa14.17□□□□□ -0.14
C11orf54-215ENST00000617482 FIBPO43427 364 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 ZNF500O60304 480 aaPredicted RBP14.16□□□□□ -0.14
C11orf54-215ENST00000617482 MPNDQ8N594 471 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 ANKRD24Q8TF21 1146 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 SUCLG2Q96I99 432 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 CCDC8Q9H0W5 538 aaPredicted RBP14.16□□□□□ -0.14
C11orf54-215ENST00000617482 CCDC39Q9UFE4 941 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 R3HCC1Q9Y3T6 440 aaKnown RBP14.16□□□□□ -0.14
C11orf54-215ENST00000617482 NFAT5O94916 1531 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 PTMAP06454 111 aaKnown RBP14.16□□□□□ -0.14
C11orf54-215ENST00000617482 TPM2P07951 284 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 GJB2P29033 226 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 ARHGEF25Q86VW2 580 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 ANKLE2Q86XL3 938 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 FAM227BQ96M60 508 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 SIL1Q9H173 461 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 BICC1Q9H694 974 aaKnown RBP14.16□□□□□ -0.14
C11orf54-215ENST00000617482 AXIN2Q9Y2T1 843 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 CYP46A1Q9Y6A2 500 aa14.16□□□□□ -0.14
C11orf54-215ENST00000617482 N4BP2Q86UW6 1770 aaPredicted RBP14.16□□□□□ -0.14
C11orf54-215ENST00000617482 MED1Q15648 1581 aaPredicted RBP14.16□□□□□ -0.14
C11orf54-215ENST00000617482 SASH1O94885 1247 aa14.15□□□□□ -0.14
C11orf54-215ENST00000617482 F13A1P00488 732 aa14.15□□□□□ -0.14
C11orf54-215ENST00000617482 KCNJ4P48050 445 aa14.15□□□□□ -0.14
C11orf54-215ENST00000617482 ERC1Q8IUD2 1116 aa14.15□□□□□ -0.14
C11orf54-215ENST00000617482 EAF2Q96CJ1 260 aaPredicted RBP14.15□□□□□ -0.14
C11orf54-215ENST00000617482 EVI5LQ96CN4 794 aa14.15□□□□□ -0.14
C11orf54-215ENST00000617482 KAZALD1Q96I82 304 aa14.15□□□□□ -0.14
C11orf54-215ENST00000617482 PXDNQ92626 1479 aa14.15□□□□□ -0.14
C11orf54-215ENST00000617482 GRM8O00222 908 aa14.15□□□□□ -0.14
C11orf54-215ENST00000617482 G3BP1Q13283 466 aaKnown RBP eCLIP14.15□□□□□ -0.14
C11orf54-215ENST00000617482 VPS53Q5VIR6 699 aa14.15□□□□□ -0.14
C11orf54-215ENST00000617482 NECAB1Q8N987 351 aa14.15□□□□□ -0.14
C11orf54-215ENST00000617482 TMEM87AQ8NBN3 555 aa14.15□□□□□ -0.14
C11orf54-215ENST00000617482 KLHDC4Q8TBB5 520 aa14.15□□□□□ -0.14
C11orf54-215ENST00000617482 COL9A3Q14050 684 aaPredicted RBP14.14□□□□□ -0.15
C11orf54-215ENST00000617482 NECTIN1Q15223 517 aa14.14□□□□□ -0.15
C11orf54-215ENST00000617482 CCDC183Q5T5S1 534 aa14.14□□□□□ -0.15
C11orf54-215ENST00000617482 LINS1Q8NG48 757 aa14.14□□□□□ -0.15
C11orf54-215ENST00000617482 ZSWIM6Q9HCJ5 1215 aa14.14□□□□□ -0.15
C11orf54-215ENST00000617482 TLR7Q9NYK1 1049 aaKnown RBP14.14□□□□□ -0.15
C11orf54-215ENST00000617482 RRP9O43818 475 aaKnown RBP14.14□□□□□ -0.15
C11orf54-215ENST00000617482 UBE2HP62256 183 aa14.14□□□□□ -0.15
C11orf54-215ENST00000617482 DNM1Q05193 864 aaKnown RBP14.14□□□□□ -0.15
C11orf54-215ENST00000617482 SLC39A6Q13433 755 aa14.14□□□□□ -0.15
C11orf54-215ENST00000617482 BOLA2Q9H3K6 86 aa14.14□□□□□ -0.15
C11orf54-215ENST00000617482 RBM8AQ9Y5S9 174 aaKnown RBP14.14□□□□□ -0.15
C11orf54-215ENST00000617482 ZKSCAN1P17029 563 aaPredicted RBP14.13□□□□□ -0.15
C11orf54-215ENST00000617482 NMIQ13287 307 aaPredicted RBP14.13□□□□□ -0.15
C11orf54-215ENST00000617482 ME3Q16798 604 aa14.13□□□□□ -0.15
C11orf54-215ENST00000617482 CCDC171Q6TFL3 1326 aa14.13□□□□□ -0.15
C11orf54-215ENST00000617482 VPS37CA5D8V6 355 aaPredicted RBP14.13□□□□□ -0.15
C11orf54-215ENST00000617482 MYL6BP14649 208 aa14.13□□□□□ -0.15
C11orf54-215ENST00000617482 FGD1P98174 961 aa14.13□□□□□ -0.15
C11orf54-215ENST00000617482 CREB3L3Q68CJ9 461 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms