RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 CHMP3Q9Y3E7 222 aa20.28■□□□□ 0.84
TNIP1-220ENST00000610535 EIF2S2P20042 333 aaKnown RBP20.28■□□□□ 0.84
TNIP1-220ENST00000610535 JAKMIP1Q96N16 626 aaKnown RBP20.28■□□□□ 0.84
TNIP1-220ENST00000610535 ZHX1Q9UKY1 873 aaPredicted RBP20.28■□□□□ 0.84
TNIP1-220ENST00000610535 KIF3AQ9Y496 699 aa20.28■□□□□ 0.84
TNIP1-220ENST00000610535 PTPRUQ92729 1446 aa20.27■□□□□ 0.84
TNIP1-220ENST00000610535 VPS37CA5D8V6 355 aaPredicted RBP20.27■□□□□ 0.84
TNIP1-220ENST00000610535 TAF7Q15545 349 aaPredicted RBP20.27■□□□□ 0.84
TNIP1-220ENST00000610535 SBNO1A3KN83 1393 aa20.27■□□□□ 0.84
TNIP1-220ENST00000610535 PRPF40BQ6NWY9 871 aaKnown RBP20.27■□□□□ 0.84
TNIP1-220ENST00000610535 NECAB1Q8N987 351 aa20.27■□□□□ 0.84
TNIP1-220ENST00000610535 KIAA1524Q8TCG1 905 aa20.27■□□□□ 0.84
TNIP1-220ENST00000610535 HTATSF1O43719 755 aaKnown RBP20.26■□□□□ 0.83
TNIP1-220ENST00000610535 C14orf37Q86TY3 774 aa20.26■□□□□ 0.83
TNIP1-220ENST00000610535 NGDNQ8NEJ9 315 aaKnown RBP20.26■□□□□ 0.83
TNIP1-220ENST00000610535 LTV1Q96GA3 475 aaPredicted RBP20.26■□□□□ 0.83
TNIP1-220ENST00000610535 PDRG1Q9NUG6 133 aa20.26■□□□□ 0.83
TNIP1-220ENST00000610535 CBX1P83916 185 aa20.26■□□□□ 0.83
TNIP1-220ENST00000610535 ST3GAL1Q11201 340 aa20.26■□□□□ 0.83
TNIP1-220ENST00000610535 BCL2L12Q9HB09 334 aa20.25■□□□□ 0.83
TNIP1-220ENST00000610535 DIAPH3Q9NSV4 1193 aa20.25■□□□□ 0.83
TNIP1-220ENST00000610535 UBR1Q8IWV7 1749 aa20.25■□□□□ 0.83
TNIP1-220ENST00000610535 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.25■□□□□ 0.83
TNIP1-220ENST00000610535 FAM208AQ9UK61 1670 aaKnown RBP20.25■□□□□ 0.83
TNIP1-220ENST00000610535 FAM173BQ6P4H8 233 aa20.25■□□□□ 0.83
TNIP1-220ENST00000610535 COL9A3Q14050 684 aaPredicted RBP20.24■□□□□ 0.83
TNIP1-220ENST00000610535 CAMK4Q16566 473 aa20.24■□□□□ 0.83
TNIP1-220ENST00000610535 ME3Q16798 604 aa20.24■□□□□ 0.83
TNIP1-220ENST00000610535 OS9Q13438 667 aaPredicted RBP20.24■□□□□ 0.83
TNIP1-220ENST00000610535 PPP4R3BQ5MIZ7 849 aa20.24■□□□□ 0.83
TNIP1-220ENST00000610535 FERMT3Q86UX7 667 aa20.24■□□□□ 0.83
TNIP1-220ENST00000610535 NALCNQ8IZF0 1738 aa20.23■□□□□ 0.83
TNIP1-220ENST00000610535 ANXA1P04083 346 aa20.23■□□□□ 0.83
TNIP1-220ENST00000610535 PI4KAP2A4QPH2 592 aa20.23■□□□□ 0.83
TNIP1-220ENST00000610535 ATP2B3Q16720 1220 aa20.23■□□□□ 0.83
TNIP1-220ENST00000610535 VPS53Q5VIR6 699 aa20.23■□□□□ 0.83
TNIP1-220ENST00000610535 PI4KAP1Q8N8J0 262 aa20.23■□□□□ 0.83
TNIP1-220ENST00000610535 RIOK3O14730 519 aaKnown RBP20.22■□□□□ 0.83
TNIP1-220ENST00000610535 KCNA6P17658 529 aa20.22■□□□□ 0.83
TNIP1-220ENST00000610535 CYP46A1Q9Y6A2 500 aa20.22■□□□□ 0.83
TNIP1-220ENST00000610535 CCDC192P0DO97 292 aa20.22■□□□□ 0.83
TNIP1-220ENST00000610535 TTC6Q86TZ1 520 aa20.22■□□□□ 0.83
TNIP1-220ENST00000610535 ZSWIM6Q9HCJ5 1215 aa20.22■□□□□ 0.83
TNIP1-220ENST00000610535 ZSCAN20P17040 1043 aaPredicted RBP20.21■□□□□ 0.83
TNIP1-220ENST00000610535 USHBP1Q8N6Y0 703 aa20.21■□□□□ 0.83
TNIP1-220ENST00000610535 GLRX3O76003 335 aaKnown RBP20.21■□□□□ 0.83
TNIP1-220ENST00000610535 LIG1P18858 919 aa20.21■□□□□ 0.83
TNIP1-220ENST00000610535 NLRP6P59044 892 aa20.21■□□□□ 0.83
TNIP1-220ENST00000610535 MAP3K5Q99683 1374 aa20.2■□□□□ 0.83
TNIP1-220ENST00000610535 BEND3Q5T5X7 828 aa20.2■□□□□ 0.82
TNIP1-220ENST00000610535 CHPF2Q9P2E5 772 aa20.2■□□□□ 0.82
TNIP1-220ENST00000610535 PTGS1P23219 599 aa20.2■□□□□ 0.82
TNIP1-220ENST00000610535 LARP1BQ659C4 914 aaKnown RBP20.2■□□□□ 0.82
TNIP1-220ENST00000610535 LUZP1Q86V48 1076 aa20.2■□□□□ 0.82
TNIP1-220ENST00000610535 TPCN1Q9ULQ1 816 aa20.2■□□□□ 0.82
TNIP1-220ENST00000610535 TTC21AQ8NDW8 1320 aa20.2■□□□□ 0.82
TNIP1-220ENST00000610535 PLEKHG1Q9ULL1 1385 aa20.2■□□□□ 0.82
TNIP1-220ENST00000610535 ZSCAN31Q96LW9 406 aaPredicted RBP20.19■□□□□ 0.82
TNIP1-220ENST00000610535 PXDNLA1KZ92 1463 aa20.19■□□□□ 0.82
TNIP1-220ENST00000610535 SPDYE4A6NLX3 237 aa20.19■□□□□ 0.82
TNIP1-220ENST00000610535 CDC37L1Q7L3B6 337 aa20.19■□□□□ 0.82
TNIP1-220ENST00000610535 CKAP2LQ8IYA6 745 aa20.19■□□□□ 0.82
TNIP1-220ENST00000610535 RUFY2Q8WXA3 655 aa20.19■□□□□ 0.82
TNIP1-220ENST00000610535 DNAAF4Q8WXU2 420 aa20.19■□□□□ 0.82
TNIP1-220ENST00000610535 TCEANC2Q96MN5 208 aa20.19■□□□□ 0.82
TNIP1-220ENST00000610535 SH2B1Q9NRF2 756 aaPredicted RBP20.19■□□□□ 0.82
TNIP1-220ENST00000610535 FMN2Q9NZ56 1722 aa20.19■□□□□ 0.82
TNIP1-220ENST00000610535 HOXC9P31274 260 aa20.18■□□□□ 0.82
TNIP1-220ENST00000610535 PA2G4Q9UQ80 394 aaKnown RBP20.18■□□□□ 0.82
TNIP1-220ENST00000610535 NECTIN1Q15223 517 aa20.18■□□□□ 0.82
TNIP1-220ENST00000610535 CLASRPQ8N2M8 674 aaKnown RBP20.18■□□□□ 0.82
TNIP1-220ENST00000610535 MRVI1Q9Y6F6 885 aa20.18■□□□□ 0.82
TNIP1-220ENST00000610535 TTC41PQ6P2S7 1318 aa20.18■□□□□ 0.82
TNIP1-220ENST00000610535 TOPAZ1Q8N9V7 1692 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 CACNA1FO60840 1977 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 KCNQ3O43525 872 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 TFIP11Q9UBB9 837 aaKnown RBP20.17■□□□□ 0.82
TNIP1-220ENST00000610535 KCNJ4P48050 445 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 TYRO3Q06418 890 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 DMTNQ08495 405 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 MAP3K11Q16584 847 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 HSP90AB4PQ58FF6 505 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 THEMISQ8N1K5 641 aaPredicted RBP20.17■□□□□ 0.82
TNIP1-220ENST00000610535 FAM200AQ8TCP9 573 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 FAM227BQ96M60 508 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 TM6SF1Q9BZW5 370 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 NUP62CLQ9H1M0 184 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 LGR6Q9HBX8 967 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 ECHDC1Q9NTX5 307 aa20.17■□□□□ 0.82
TNIP1-220ENST00000610535 RBM8AQ9Y5S9 174 aaKnown RBP20.17■□□□□ 0.82
TNIP1-220ENST00000610535 USP42Q9H9J4 1324 aaKnown RBP20.17■□□□□ 0.82
TNIP1-220ENST00000610535 GOLGA6L6A8MZA4 724 aa20.16■□□□□ 0.82
TNIP1-220ENST00000610535 LRMPQ12912 555 aa20.16■□□□□ 0.82
TNIP1-220ENST00000610535 CHAF1AQ13111 956 aaPredicted RBP20.16■□□□□ 0.82
TNIP1-220ENST00000610535 PDCL2Q8N4E4 241 aa20.16■□□□□ 0.82
TNIP1-220ENST00000610535 TPM3P06753 285 aa20.16■□□□□ 0.82
TNIP1-220ENST00000610535 KRT85P78386 507 aa20.16■□□□□ 0.82
TNIP1-220ENST00000610535 CREB3L3Q68CJ9 461 aa20.16■□□□□ 0.82
TNIP1-220ENST00000610535 NRBP1Q9UHY1 535 aa20.16■□□□□ 0.82
TNIP1-220ENST00000610535 LRRC37A3O60309 1634 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms