RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.19■□□□□ 0.34
HLA-F-230ENST00000606273 PRSS12P56730 875 aa17.19■□□□□ 0.34
HLA-F-230ENST00000606273 ARHGAP27Q6ZUM4 889 aa17.19■□□□□ 0.34
HLA-F-230ENST00000606273 C16orf71Q8IYS4 520 aaPredicted RBP17.19■□□□□ 0.34
HLA-F-230ENST00000606273 CCER1Q8TC90 406 aaPredicted RBP17.19■□□□□ 0.34
HLA-F-230ENST00000606273 AK7Q96M32 723 aa17.18■□□□□ 0.34
HLA-F-230ENST00000606273 BCS1LQ9Y276 419 aa17.18■□□□□ 0.34
HLA-F-230ENST00000606273 WDR90Q96KV7 1748 aa17.17■□□□□ 0.34
HLA-F-230ENST00000606273 CDHR5Q9HBB8 845 aa17.17■□□□□ 0.34
HLA-F-230ENST00000606273 WBP1LQ9NX94 342 aa17.17■□□□□ 0.34
HLA-F-230ENST00000606273 FAM198AQ9UFP1 575 aa17.17■□□□□ 0.34
HLA-F-230ENST00000606273 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
HLA-F-230ENST00000606273 A0A0G2JLW4 131 aa17.16■□□□□ 0.34
HLA-F-230ENST00000606273 TGFB2P61812 414 aa17.16■□□□□ 0.34
HLA-F-230ENST00000606273 MPRIPQ6WCQ1 1025 aa17.16■□□□□ 0.34
HLA-F-230ENST00000606273 CICQ96RK0 1608 aaPredicted RBP17.16■□□□□ 0.34
HLA-F-230ENST00000606273 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.15■□□□□ 0.34
HLA-F-230ENST00000606273 DOT1LQ8TEK3 1739 aa17.15■□□□□ 0.34
HLA-F-230ENST00000606273 PCNTO95613 3336 aa17.14■□□□□ 0.33
HLA-F-230ENST00000606273 SSFA2P28290 1259 aa17.14■□□□□ 0.33
HLA-F-230ENST00000606273 LRCH3Q96II8 777 aa17.14■□□□□ 0.33
HLA-F-230ENST00000606273 MEGF6O75095 1541 aa17.14■□□□□ 0.33
HLA-F-230ENST00000606273 CLSPNQ9HAW4 1339 aa17.14■□□□□ 0.33
HLA-F-230ENST00000606273 TONSLQ96HA7 1378 aa17.14■□□□□ 0.33
HLA-F-230ENST00000606273 SMAPO00193 183 aa17.13■□□□□ 0.33
HLA-F-230ENST00000606273 HSPA1AP0DMV8 641 aaKnown RBP17.13■□□□□ 0.33
HLA-F-230ENST00000606273 HSPA1BP0DMV9 641 aaKnown RBP17.13■□□□□ 0.33
HLA-F-230ENST00000606273 HOXC9P31274 260 aa17.13■□□□□ 0.33
HLA-F-230ENST00000606273 C9orf131Q5VYM1 1079 aa17.13■□□□□ 0.33
HLA-F-230ENST00000606273 RRAGCQ9HB90 399 aa17.13■□□□□ 0.33
HLA-F-230ENST00000606273 CGNL1Q0VF96 1302 aa17.13■□□□□ 0.33
HLA-F-230ENST00000606273 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
HLA-F-230ENST00000606273 MMP10P09238 476 aa17.12■□□□□ 0.33
HLA-F-230ENST00000606273 NBPF6Q5VWK0 638 aa17.12■□□□□ 0.33
HLA-F-230ENST00000606273 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
HLA-F-230ENST00000606273 TMC1Q8TDI8 760 aa17.12■□□□□ 0.33
HLA-F-230ENST00000606273 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
HLA-F-230ENST00000606273 NBPF4Q96M43 638 aa17.12■□□□□ 0.33
HLA-F-230ENST00000606273 SLC12A5Q9H2X9 1139 aa17.12■□□□□ 0.33
HLA-F-230ENST00000606273 LTN1O94822 1766 aa17.12■□□□□ 0.33
HLA-F-230ENST00000606273 PXDNLA1KZ92 1463 aa17.12■□□□□ 0.33
HLA-F-230ENST00000606273 C5P01031 1676 aa17.11■□□□□ 0.33
HLA-F-230ENST00000606273 FBLN1P23142 703 aa17.11■□□□□ 0.33
HLA-F-230ENST00000606273 NYAP1Q6ZVC0 841 aa17.11■□□□□ 0.33
HLA-F-230ENST00000606273 ARHGEF1Q92888 912 aaKnown RBP17.11■□□□□ 0.33
HLA-F-230ENST00000606273 MAP3K19Q56UN5 1328 aa17.11■□□□□ 0.33
HLA-F-230ENST00000606273 USP54Q70EL1 1684 aa17.1■□□□□ 0.33
HLA-F-230ENST00000606273 C3orf80F5H4A9 247 aa17.1■□□□□ 0.33
HLA-F-230ENST00000606273 FCHSD2O94868 740 aa17.1■□□□□ 0.33
HLA-F-230ENST00000606273 DPEP1P16444 411 aa17.1■□□□□ 0.33
HLA-F-230ENST00000606273 AMPHP49418 695 aa17.1■□□□□ 0.33
HLA-F-230ENST00000606273 KCNV2Q8TDN2 545 aa17.1■□□□□ 0.33
HLA-F-230ENST00000606273 HPS5Q9UPZ3 1129 aa17.1■□□□□ 0.33
HLA-F-230ENST00000606273 KDM2BQ8NHM5 1336 aa17.1■□□□□ 0.33
HLA-F-230ENST00000606273 LINC00116Q8NCU8 138 aa17.09■□□□□ 0.33
HLA-F-230ENST00000606273 SMC1BQ8NDV3 1235 aa17.09■□□□□ 0.33
HLA-F-230ENST00000606273 RAPGEF4Q8WZA2 1011 aa17.09■□□□□ 0.33
HLA-F-230ENST00000606273 TSR3Q9UJK0 312 aaKnown RBP17.09■□□□□ 0.33
HLA-F-230ENST00000606273 NSD3Q9BZ95 1437 aa17.09■□□□□ 0.33
HLA-F-230ENST00000606273 USHBP1Q8N6Y0 703 aa17.08■□□□□ 0.32
HLA-F-230ENST00000606273 C4BP0C0L5 1744 aa17.07■□□□□ 0.32
HLA-F-230ENST00000606273 MON2Q7Z3U7 1717 aa17.07■□□□□ 0.32
HLA-F-230ENST00000606273 EDC4Q6P2E9 1401 aaKnown RBP17.07■□□□□ 0.32
HLA-F-230ENST00000606273 ITGBL1O95965 494 aaPredicted RBP17.07■□□□□ 0.32
HLA-F-230ENST00000606273 KCNA3P22001 575 aa17.07■□□□□ 0.32
HLA-F-230ENST00000606273 PIGBQ92521 554 aa17.07■□□□□ 0.32
HLA-F-230ENST00000606273 TATDN2Q93075 761 aa17.07■□□□□ 0.32
HLA-F-230ENST00000606273 PLEKHG2Q9H7P9 1386 aa17.06■□□□□ 0.32
HLA-F-230ENST00000606273 LOC102724428A0A0B4J2F2 783 aa17.06■□□□□ 0.32
HLA-F-230ENST00000606273 NBPF26B4DH59 902 aa17.06■□□□□ 0.32
HLA-F-230ENST00000606273 CYP27B1O15528 508 aa17.06■□□□□ 0.32
HLA-F-230ENST00000606273 TATP17735 454 aaPredicted RBP17.06■□□□□ 0.32
HLA-F-230ENST00000606273 SIK1P57059 783 aa17.06■□□□□ 0.32
HLA-F-230ENST00000606273 NLGN1Q8N2Q7 840 aa17.06■□□□□ 0.32
HLA-F-230ENST00000606273 TERF2IPQ9NYB0 399 aa17.06■□□□□ 0.32
HLA-F-230ENST00000606273 PNMA3Q9UL41 463 aa17.06■□□□□ 0.32
HLA-F-230ENST00000606273 FAM208AQ9UK61 1670 aaKnown RBP17.06■□□□□ 0.32
HLA-F-230ENST00000606273 KCPQ6ZWJ8 1503 aa17.06■□□□□ 0.32
HLA-F-230ENST00000606273 TOGARAM1Q9Y4F4 1720 aa17.05■□□□□ 0.32
HLA-F-230ENST00000606273 PCDH11XQ9BZA7 1347 aa17.05■□□□□ 0.32
HLA-F-230ENST00000606273 PCDH11YQ9BZA8 1340 aa17.05■□□□□ 0.32
HLA-F-230ENST00000606273 GNPATO15228 680 aa17.05■□□□□ 0.32
HLA-F-230ENST00000606273 C10orf71Q711Q0 1435 aa17.04■□□□□ 0.32
HLA-F-230ENST00000606273 MLLT3P42568 568 aaPredicted RBP17.04■□□□□ 0.32
HLA-F-230ENST00000606273 ITPK1Q13572 414 aa17.04■□□□□ 0.32
HLA-F-230ENST00000606273 COG3Q96JB2 828 aa17.04■□□□□ 0.32
HLA-F-230ENST00000606273 NPDC1Q9NQX5 325 aaPredicted RBP17.04■□□□□ 0.32
HLA-F-230ENST00000606273 TMF1P82094 1093 aa17.03■□□□□ 0.32
HLA-F-230ENST00000606273 SAMD7Q7Z3H4 446 aa17.03■□□□□ 0.32
HLA-F-230ENST00000606273 CCDC87Q9NVE4 849 aa17.03■□□□□ 0.32
HLA-F-230ENST00000606273 RNF181Q9P0P0 153 aa17.03■□□□□ 0.32
HLA-F-230ENST00000606273 RBM27Q9P2N5 1060 aaKnown RBP17.03■□□□□ 0.32
HLA-F-230ENST00000606273 TAF1LQ8IZX4 1826 aa17.03■□□□□ 0.32
HLA-F-230ENST00000606273 A0A1W2PP64 1363 aa17.02■□□□□ 0.32
HLA-F-230ENST00000606273 ROCK2O75116 1388 aaKnown RBP17.02■□□□□ 0.32
HLA-F-230ENST00000606273 TRAPPC3LQ5T215 181 aa17.02■□□□□ 0.32
HLA-F-230ENST00000606273 DCAF5Q96JK2 942 aa17.02■□□□□ 0.32
HLA-F-230ENST00000606273 PIM2Q9P1W9 311 aa17.02■□□□□ 0.32
HLA-F-230ENST00000606273 ATP6V1AP38606 617 aa17.01■□□□□ 0.31
HLA-F-230ENST00000606273 NUDT18Q6ZVK8 323 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms