RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PARP3Q9Y6F1 533 aa5.61□□□□□ -1.51
HMGB1P50-201ENST00000605814 EIF4G1Q04637 1599 aaKnown RBP5.6□□□□□ -1.51
HMGB1P50-201ENST00000605814 DHX57Q6P158 1386 aaKnown RBP5.6□□□□□ -1.51
HMGB1P50-201ENST00000605814 SKIP12755 728 aa5.6□□□□□ -1.51
HMGB1P50-201ENST00000605814 HOXB4P17483 251 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P50-201ENST00000605814 ZIC5Q96T25 663 aa5.6□□□□□ -1.51
HMGB1P50-201ENST00000605814 TIMELESSQ9UNS1 1208 aa5.6□□□□□ -1.51
HMGB1P50-201ENST00000605814 CUX2O14529 1486 aa5.59□□□□□ -1.51
HMGB1P50-201ENST00000605814 ELOA3CA0A087WX78 387 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P50-201ENST00000605814 ELOA3DA6NLF2 546 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P50-201ENST00000605814 SLC24A1O60721 1099 aa5.59□□□□□ -1.51
HMGB1P50-201ENST00000605814 LAMC2Q13753 1193 aa5.59□□□□□ -1.51
HMGB1P50-201ENST00000605814 ELOA3BQ3SY89 546 aa5.59□□□□□ -1.51
HMGB1P50-201ENST00000605814 ZMYM1Q5SVZ6 1142 aa5.59□□□□□ -1.51
HMGB1P50-201ENST00000605814 SYT9Q86SS6 491 aa5.59□□□□□ -1.51
HMGB1P50-201ENST00000605814 ELOA3Q8NG57 546 aa5.59□□□□□ -1.51
HMGB1P50-201ENST00000605814 WASHC2AQ641Q2 1341 aa5.58□□□□□ -1.52
HMGB1P50-201ENST00000605814 TMEM229AB2RXF0 380 aa5.58□□□□□ -1.52
HMGB1P50-201ENST00000605814 GTF2IP78347 998 aa5.58□□□□□ -1.52
HMGB1P50-201ENST00000605814 MTFR1Q15390 333 aa5.58□□□□□ -1.52
HMGB1P50-201ENST00000605814 SAMD5Q5TGI4 173 aa5.58□□□□□ -1.52
HMGB1P50-201ENST00000605814 LRRC69Q6ZNQ3 347 aa5.58□□□□□ -1.52
HMGB1P50-201ENST00000605814 RHPN1Q8TCX5 695 aa5.58□□□□□ -1.52
HMGB1P50-201ENST00000605814 SLC4A9Q96Q91 983 aa5.58□□□□□ -1.52
HMGB1P50-201ENST00000605814 NACC1Q96RE7 527 aa5.58□□□□□ -1.52
HMGB1P50-201ENST00000605814 USP35Q9P2H5 1018 aa5.58□□□□□ -1.52
HMGB1P50-201ENST00000605814 CHIC2Q9UKJ5 165 aa5.58□□□□□ -1.52
HMGB1P50-201ENST00000605814 TXLNAP40222 546 aa5.57□□□□□ -1.52
HMGB1P50-201ENST00000605814 L3MBTL2Q969R5 705 aa5.57□□□□□ -1.52
HMGB1P50-201ENST00000605814 TRIM11Q96F44 468 aa5.57□□□□□ -1.52
HMGB1P50-201ENST00000605814 PPP4R2Q9NY27 417 aa5.57□□□□□ -1.52
HMGB1P50-201ENST00000605814 KLF15Q9UIH9 416 aa5.57□□□□□ -1.52
HMGB1P50-201ENST00000605814 WASHC2CQ9Y4E1 1318 aa5.56□□□□□ -1.52
HMGB1P50-201ENST00000605814 M0R082 166 aa5.56□□□□□ -1.52
HMGB1P50-201ENST00000605814 LZTS3O60299 673 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P50-201ENST00000605814 PPP1R15AO75807 674 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P50-201ENST00000605814 TBC1D8BQ0IIM8 1120 aa5.56□□□□□ -1.52
HMGB1P50-201ENST00000605814 TRIM28Q13263 835 aaKnown RBP5.56□□□□□ -1.52
HMGB1P50-201ENST00000605814 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB1P50-201ENST00000605814 ZNF417Q8TAU3 575 aa5.56□□□□□ -1.52
HMGB1P50-201ENST00000605814 ZNF587Q96SQ5 575 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P50-201ENST00000605814 STRN4Q9NRL3 753 aa5.56□□□□□ -1.52
HMGB1P50-201ENST00000605814 ZNF358Q9NW07 568 aa5.56□□□□□ -1.52
HMGB1P50-201ENST00000605814 IQSEC3Q9UPP2 1182 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P50-201ENST00000605814 USP3Q9Y6I4 520 aa5.56□□□□□ -1.52
HMGB1P50-201ENST00000605814 SERTM1A2A2V5 107 aa5.55□□□□□ -1.52
HMGB1P50-201ENST00000605814 PIK3CDO00329 1044 aa5.55□□□□□ -1.52
HMGB1P50-201ENST00000605814 SIN3BO75182 1162 aa5.55□□□□□ -1.52
HMGB1P50-201ENST00000605814 NOS2P35228 1153 aa5.55□□□□□ -1.52
HMGB1P50-201ENST00000605814 NCOA4Q13772 614 aa5.55□□□□□ -1.52
HMGB1P50-201ENST00000605814 TRIM50Q86XT4 487 aa5.55□□□□□ -1.52
HMGB1P50-201ENST00000605814 SLC9A9Q8IVB4 645 aa5.55□□□□□ -1.52
HMGB1P50-201ENST00000605814 SCHIP1Q9P0W5 487 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P50-201ENST00000605814 NOP58Q9Y2X3 529 aaKnown RBP5.55□□□□□ -1.52
HMGB1P50-201ENST00000605814 GPC6Q9Y625 555 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P50-201ENST00000605814 GOLGA3Q08378 1498 aa5.54□□□□□ -1.52
HMGB1P50-201ENST00000605814 FAM229AH3BQW9 127 aa5.54□□□□□ -1.52
HMGB1P50-201ENST00000605814 EFSO43281 561 aa5.54□□□□□ -1.52
HMGB1P50-201ENST00000605814 TPRNQ4KMQ1 711 aa5.54□□□□□ -1.52
HMGB1P50-201ENST00000605814 TBCELQ5QJ74 424 aa5.54□□□□□ -1.52
HMGB1P50-201ENST00000605814 CEP63Q96MT8 703 aa5.54□□□□□ -1.52
HMGB1P50-201ENST00000605814 ANKIB1Q9P2G1 1089 aa5.54□□□□□ -1.52
HMGB1P50-201ENST00000605814 PCDHGA11Q9Y5H2 935 aa5.54□□□□□ -1.52
HMGB1P50-201ENST00000605814 USP17L5A8MUK1 530 aa5.53□□□□□ -1.52
HMGB1P50-201ENST00000605814 RAD21O60216 631 aa5.53□□□□□ -1.52
HMGB1P50-201ENST00000605814 EIF5BO60841 1220 aaKnown RBP5.53□□□□□ -1.52
HMGB1P50-201ENST00000605814 ADH7P40394 386 aa5.53□□□□□ -1.52
HMGB1P50-201ENST00000605814 ATP1A2P50993 1020 aa5.53□□□□□ -1.52
HMGB1P50-201ENST00000605814 SPEM2Q0P670 501 aa5.53□□□□□ -1.52
HMGB1P50-201ENST00000605814 TEAD4Q15561 434 aa5.53□□□□□ -1.52
HMGB1P50-201ENST00000605814 TRAPPC3LQ5T215 181 aa5.53□□□□□ -1.52
HMGB1P50-201ENST00000605814 RAB44Q7Z6P3 723 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P50-201ENST00000605814 NBPF11Q86T75 865 aa5.53□□□□□ -1.52
HMGB1P50-201ENST00000605814 DEPDC4Q8N2C3 294 aa5.53□□□□□ -1.52
HMGB1P50-201ENST00000605814 BRD7Q9NPI1 651 aa5.53□□□□□ -1.52
HMGB1P50-201ENST00000605814 VPS8Q8N3P4 1428 aa5.53□□□□□ -1.52
HMGB1P50-201ENST00000605814 CEP164Q9UPV0 1460 aa5.52□□□□□ -1.53
HMGB1P50-201ENST00000605814 MCM6Q14566 821 aa5.52□□□□□ -1.53
HMGB1P50-201ENST00000605814 TNS4Q8IZW8 715 aa5.52□□□□□ -1.53
HMGB1P50-201ENST00000605814 NFATC2IPQ8NCF5 419 aa5.52□□□□□ -1.53
HMGB1P50-201ENST00000605814 TPCN2Q8NHX9 752 aa5.52□□□□□ -1.53
HMGB1P50-201ENST00000605814 ZDHHC1Q8WTX9 485 aa5.52□□□□□ -1.53
HMGB1P50-201ENST00000605814 IPO9Q96P70 1041 aaKnown RBP5.52□□□□□ -1.53
HMGB1P50-201ENST00000605814 UBE2OQ9C0C9 1292 aaKnown RBP5.52□□□□□ -1.53
HMGB1P50-201ENST00000605814 IGFLR1Q9H665 355 aa5.52□□□□□ -1.53
HMGB1P50-201ENST00000605814 KIF21BO75037 1637 aa5.52□□□□□ -1.53
HMGB1P50-201ENST00000605814 BAZ1BQ9UIG0 1483 aaKnown RBP5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 ADARB2-AS1A8MUL3 147 aa5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 EML1O00423 815 aa5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 LILRB5O75023 590 aa5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 PSMA6P60900 246 aaKnown RBP5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 RAC1P63000 192 aa5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 SFSWAPQ12872 951 aaKnown RBP5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 ZNF295-AS1Q8N0V1 137 aa5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 TNFRSF25Q93038 417 aa5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 BHMTQ93088 406 aa5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 CCDC136Q96JN2 1154 aa5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 PNMA5Q96PV4 448 aa5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 SLC30A3Q99726 388 aa5.51□□□□□ -1.53
HMGB1P50-201ENST00000605814 TPSG1Q9NRR2 321 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms