RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 BAG6P46379 1132 aa29.19■■■□□ 2.26
IRF3-227ENST00000600911 SF3B2Q13435 895 aaKnown RBP29.19■■■□□ 2.26
IRF3-227ENST00000600911 ZBTB3Q9H5J0 574 aa29.19■■■□□ 2.26
IRF3-227ENST00000600911 TBC1D2BQ9UPU7 963 aa29.19■■■□□ 2.26
IRF3-227ENST00000600911 RPS6KA4O75676 772 aa29.18■■■□□ 2.26
IRF3-227ENST00000600911 KSR2Q6VAB6 950 aa29.18■■■□□ 2.26
IRF3-227ENST00000600911 ANO8Q9HCE9 1232 aaPredicted RBP29.18■■■□□ 2.26
IRF3-227ENST00000600911 PDE3AQ14432 1141 aa29.17■■■□□ 2.26
IRF3-227ENST00000600911 AKT1S1Q96B36 256 aa29.17■■■□□ 2.26
IRF3-227ENST00000600911 SLC4A10Q6U841 1118 aa29.16■■■□□ 2.26
IRF3-227ENST00000600911 ANKRD13DQ6ZTN6 518 aa29.16■■■□□ 2.26
IRF3-227ENST00000600911 SCN7AQ01118 1682 aa29.16■■■□□ 2.26
IRF3-227ENST00000600911 AFDNP55196 1824 aaKnown RBP29.16■■■□□ 2.26
IRF3-227ENST00000600911 HLFQ16534 295 aa29.16■■■□□ 2.26
IRF3-227ENST00000600911 FTSJ3Q8IY81 847 aaKnown RBP29.16■■■□□ 2.26
IRF3-227ENST00000600911 EXOC6Q8TAG9 804 aa29.16■■■□□ 2.26
IRF3-227ENST00000600911 DNAAF4Q8WXU2 420 aa29.16■■■□□ 2.26
IRF3-227ENST00000600911 AK7Q96M32 723 aa29.16■■■□□ 2.26
IRF3-227ENST00000600911 DZIP3Q86Y13 1208 aaKnown RBP29.15■■■□□ 2.26
IRF3-227ENST00000600911 ANKRD36CQ5JPF3 1778 aa29.14■■■□□ 2.26
IRF3-227ENST00000600911 PHF14O94880 888 aa29.14■■■□□ 2.26
IRF3-227ENST00000600911 RIC3Q7Z5B4 369 aa29.14■■■□□ 2.26
IRF3-227ENST00000600911 PLBD2Q8NHP8 589 aa29.14■■■□□ 2.26
IRF3-227ENST00000600911 ARXQ96QS3 562 aa29.14■■■□□ 2.26
IRF3-227ENST00000600911 PXDNLA1KZ92 1463 aa29.14■■■□□ 2.25
IRF3-227ENST00000600911 FKBP8Q14318 412 aa29.13■■■□□ 2.25
IRF3-227ENST00000600911 MAP3K15Q6ZN16 1313 aa29.13■■■□□ 2.25
IRF3-227ENST00000600911 CCDC125Q86Z20 511 aa29.12■■■□□ 2.25
IRF3-227ENST00000600911 RTCBQ9Y3I0 505 aaKnown RBP29.12■■■□□ 2.25
IRF3-227ENST00000600911 CAMTA2O94983 1202 aa29.12■■■□□ 2.25
IRF3-227ENST00000600911 DDX58O95786 925 aaKnown RBP29.12■■■□□ 2.25
IRF3-227ENST00000600911 BEND3Q5T5X7 828 aa29.12■■■□□ 2.25
IRF3-227ENST00000600911 INTS3Q68E01 1043 aaKnown RBP29.12■■■□□ 2.25
IRF3-227ENST00000600911 ARHGEF1Q92888 912 aaKnown RBP29.12■■■□□ 2.25
IRF3-227ENST00000600911 SRP68Q9UHB9 627 aaKnown RBP29.12■■■□□ 2.25
IRF3-227ENST00000600911 MVPQ14764 893 aaKnown RBP29.11■■■□□ 2.25
IRF3-227ENST00000600911 IGKV5-2P06315 115 aa29.1■■■□□ 2.25
IRF3-227ENST00000600911 CWF19L2Q2TBE0 894 aaKnown RBP29.1■■■□□ 2.25
IRF3-227ENST00000600911 ITPRIPQ8IWB1 547 aa29.1■■■□□ 2.25
IRF3-227ENST00000600911 MYD88Q99836 296 aa29.1■■■□□ 2.25
IRF3-227ENST00000600911 METTL22Q9BUU2 404 aaPredicted RBP29.1■■■□□ 2.25
IRF3-227ENST00000600911 KIF6Q6ZMV9 814 aa29.09■■■□□ 2.25
IRF3-227ENST00000600911 BCL2L12Q9HB09 334 aa29.09■■■□□ 2.25
IRF3-227ENST00000600911 ATP10DQ9P241 1426 aa29.09■■■□□ 2.25
IRF3-227ENST00000600911 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.09■■■□□ 2.25
IRF3-227ENST00000600911 ATP5J2-PTCD1G3V325 749 aa29.08■■■□□ 2.25
IRF3-227ENST00000600911 QSER1Q2KHR3 1735 aa29.06■■■□□ 2.24
IRF3-227ENST00000600911 GIGYF2Q6Y7W6 1299 aaKnown RBP29.05■■■□□ 2.24
IRF3-227ENST00000600911 NEFLP07196 543 aa29.05■■■□□ 2.24
IRF3-227ENST00000600911 MS4A1P11836 297 aa29.05■■■□□ 2.24
IRF3-227ENST00000600911 TRAPPC3LQ5T215 181 aa29.05■■■□□ 2.24
IRF3-227ENST00000600911 USPL1Q5W0Q7 1092 aa29.05■■■□□ 2.24
IRF3-227ENST00000600911 TFCP2L1Q9NZI6 479 aa29.05■■■□□ 2.24
IRF3-227ENST00000600911 PNPLA7Q6ZV29 1317 aa29.05■■■□□ 2.24
IRF3-227ENST00000600911 NARFQ9UHQ1 456 aa29.04■■■□□ 2.24
IRF3-227ENST00000600911 ERVV-1B6SEH8 477 aa29.03■■■□□ 2.24
IRF3-227ENST00000600911 SSFA2P28290 1259 aa29.03■■■□□ 2.24
IRF3-227ENST00000600911 CCT4P50991 539 aaKnown RBP29.03■■■□□ 2.24
IRF3-227ENST00000600911 COL23A1Q86Y22 540 aaPredicted RBP29.03■■■□□ 2.24
IRF3-227ENST00000600911 MEIS3Q99687 375 aa29.03■■■□□ 2.24
IRF3-227ENST00000600911 SRCIN1Q9C0H9 1055 aa29.03■■■□□ 2.24
IRF3-227ENST00000600911 NEURL1BA8MQ27 555 aa29.02■■■□□ 2.24
IRF3-227ENST00000600911 ZBTB7BO15156 539 aaPredicted RBP29.02■■■□□ 2.24
IRF3-227ENST00000600911 TCIRG1Q13488 830 aa29.02■■■□□ 2.24
IRF3-227ENST00000600911 SLC15A2Q16348 729 aa29.02■■■□□ 2.24
IRF3-227ENST00000600911 NPM2Q86SE8 214 aaKnown RBP29.02■■■□□ 2.24
IRF3-227ENST00000600911 LINS1Q8NG48 757 aa29.02■■■□□ 2.24
IRF3-227ENST00000600911 ISCA1Q9BUE6 129 aa29.02■■■□□ 2.24
IRF3-227ENST00000600911 USP42Q9H9J4 1324 aaKnown RBP29.02■■■□□ 2.24
IRF3-227ENST00000600911 A0A087WZG4 1122 aa29.02■■■□□ 2.24
IRF3-227ENST00000600911 GPTP24298 496 aa29.02■■■□□ 2.24
IRF3-227ENST00000600911 GTF3C3Q9Y5Q9 886 aa29.02■■■□□ 2.24
IRF3-227ENST00000600911 UBN2Q6ZU65 1347 aa29.01■■■□□ 2.23
IRF3-227ENST00000600911 JARID2Q92833 1246 aaPredicted RBP29■■■□□ 2.23
IRF3-227ENST00000600911 ADRA2BP18089 450 aa28.99■■■□□ 2.23
IRF3-227ENST00000600911 RFC4P35249 363 aa28.99■■■□□ 2.23
IRF3-227ENST00000600911 PDGFDQ9GZP0 370 aaPredicted RBP28.99■■■□□ 2.23
IRF3-227ENST00000600911 USP44Q9H0E7 712 aa28.99■■■□□ 2.23
IRF3-227ENST00000600911 ZNF34Q8IZ26 560 aa28.98■■■□□ 2.23
IRF3-227ENST00000600911 DDX19BQ9UMR2 479 aa28.98■■■□□ 2.23
IRF3-227ENST00000600911 C1orf115Q9H7X2 142 aa28.98■■■□□ 2.23
IRF3-227ENST00000600911 STK32BQ9NY57 414 aa28.98■■■□□ 2.23
IRF3-227ENST00000600911 ALDH1L1O75891 902 aa28.97■■■□□ 2.23
IRF3-227ENST00000600911 NBPF7P0C2Y1 421 aaPredicted RBP28.97■■■□□ 2.23
IRF3-227ENST00000600911 NEXNQ0ZGT2 675 aa28.97■■■□□ 2.23
IRF3-227ENST00000600911 GCKRQ14397 625 aa28.97■■■□□ 2.23
IRF3-227ENST00000600911 TBC1D9BQ66K14 1250 aa28.97■■■□□ 2.23
IRF3-227ENST00000600911 COL24A1Q17RW2 1714 aa28.97■■■□□ 2.23
IRF3-227ENST00000600911 GYS1P13807 737 aa28.96■■■□□ 2.23
IRF3-227ENST00000600911 ZBTB40Q9NUA8 1239 aa28.96■■■□□ 2.23
IRF3-227ENST00000600911 ZPR1O75312 459 aa28.95■■■□□ 2.23
IRF3-227ENST00000600911 NLRP10Q86W26 655 aa28.94■■■□□ 2.22
IRF3-227ENST00000600911 BICDL1Q6ZP65 573 aa28.93■■■□□ 2.22
IRF3-227ENST00000600911 SYNE4Q8N205 404 aa28.93■■■□□ 2.22
IRF3-227ENST00000600911 TRIM28Q13263 835 aaKnown RBP28.92■■■□□ 2.22
IRF3-227ENST00000600911 CLEC4GQ6UXB4 293 aa28.92■■■□□ 2.22
IRF3-227ENST00000600911 NIP7Q9Y221 180 aaKnown RBP eCLIP28.92■■■□□ 2.22
IRF3-227ENST00000600911 HMGB2P26583 209 aaKnown RBP28.91■■■□□ 2.22
IRF3-227ENST00000600911 CASP7P55210 303 aa28.91■■■□□ 2.22
IRF3-227ENST00000600911 HSP90AB3PQ58FF7 597 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms