RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 ADCK5Q3MIX3 580 aa20.77■□□□□ 0.92
ARHGEF1-213ENST00000595897 SMAP1Q8IYB5 467 aaPredicted RBP20.77■□□□□ 0.92
ARHGEF1-213ENST00000595897 CLASRPQ8N2M8 674 aaKnown RBP20.77■□□□□ 0.92
ARHGEF1-213ENST00000595897 PI4KAP2A4QPH2 592 aa20.76■□□□□ 0.91
ARHGEF1-213ENST00000595897 PTH1RQ03431 593 aa20.76■□□□□ 0.91
ARHGEF1-213ENST00000595897 VPS53Q5VIR6 699 aa20.76■□□□□ 0.91
ARHGEF1-213ENST00000595897 PI4KAP1Q8N8J0 262 aa20.76■□□□□ 0.91
ARHGEF1-213ENST00000595897 ZSCAN31Q96LW9 406 aaPredicted RBP20.76■□□□□ 0.91
ARHGEF1-213ENST00000595897 FUCA2Q9BTY2 467 aa20.76■□□□□ 0.91
ARHGEF1-213ENST00000595897 SH2B1Q9NRF2 756 aaPredicted RBP20.76■□□□□ 0.91
ARHGEF1-213ENST00000595897 TMEM2Q9UHN6 1383 aa20.76■□□□□ 0.91
ARHGEF1-213ENST00000595897 GOLGA6L6A8MZA4 724 aa20.76■□□□□ 0.91
ARHGEF1-213ENST00000595897 PXDNLA1KZ92 1463 aa20.76■□□□□ 0.91
ARHGEF1-213ENST00000595897 ZKSCAN1P17029 563 aaPredicted RBP20.76■□□□□ 0.91
ARHGEF1-213ENST00000595897 NECAB1Q8N987 351 aa20.75■□□□□ 0.91
ARHGEF1-213ENST00000595897 DNAAF4Q8WXU2 420 aa20.75■□□□□ 0.91
ARHGEF1-213ENST00000595897 GTF2F1P35269 517 aaKnown RBP eCLIP20.75■□□□□ 0.913e-8■□□□□ 11.3
ARHGEF1-213ENST00000595897 BABAM1Q9NWV8 329 aa20.75■□□□□ 0.91
ARHGEF1-213ENST00000595897 TTC41PQ6P2S7 1318 aa20.74■□□□□ 0.91
ARHGEF1-213ENST00000595897 ZNF710Q8N1W2 664 aa20.74■□□□□ 0.91
ARHGEF1-213ENST00000595897 CHPF2Q9P2E5 772 aa20.74■□□□□ 0.91
ARHGEF1-213ENST00000595897 XRN1Q8IZH2 1706 aaKnown RBP20.74■□□□□ 0.91
ARHGEF1-213ENST00000595897 AP5Z1O43299 807 aa20.74■□□□□ 0.91
ARHGEF1-213ENST00000595897 TPM3P06753 285 aa20.74■□□□□ 0.91
ARHGEF1-213ENST00000595897 HOXC9P31274 260 aa20.74■□□□□ 0.91
ARHGEF1-213ENST00000595897 LARP1BQ659C4 914 aaKnown RBP20.74■□□□□ 0.91
ARHGEF1-213ENST00000595897 FERMT3Q86UX7 667 aa20.74■□□□□ 0.91
ARHGEF1-213ENST00000595897 USHBP1Q8N6Y0 703 aa20.74■□□□□ 0.91
ARHGEF1-213ENST00000595897 GPATCH3Q96I76 525 aa20.74■□□□□ 0.91
ARHGEF1-213ENST00000595897 KIAA1524Q8TCG1 905 aa20.73■□□□□ 0.91
ARHGEF1-213ENST00000595897 PRDM4Q9UKN5 801 aa20.73■□□□□ 0.91
ARHGEF1-213ENST00000595897 TNRQ92752 1358 aa20.73■□□□□ 0.91
ARHGEF1-213ENST00000595897 IFIT2P09913 472 aaKnown RBP20.73■□□□□ 0.91
ARHGEF1-213ENST00000595897 CAMK4Q16566 473 aa20.73■□□□□ 0.91
ARHGEF1-213ENST00000595897 PYCARDQ9ULZ3 195 aa20.73■□□□□ 0.91
ARHGEF1-213ENST00000595897 KRT85P78386 507 aa20.73■□□□□ 0.91
ARHGEF1-213ENST00000595897 ME3Q16798 604 aa20.73■□□□□ 0.91
ARHGEF1-213ENST00000595897 ZSWIM6Q9HCJ5 1215 aa20.73■□□□□ 0.91
ARHGEF1-213ENST00000595897 ECHDC1Q9NTX5 307 aa20.73■□□□□ 0.91
ARHGEF1-213ENST00000595897 ANXA1P04083 346 aa20.72■□□□□ 0.91
ARHGEF1-213ENST00000595897 BEND3Q5T5X7 828 aa20.72■□□□□ 0.91
ARHGEF1-213ENST00000595897 ADAMTS13Q76LX8 1427 aa20.72■□□□□ 0.91
ARHGEF1-213ENST00000595897 GOLGA6L4A6NEF3 574 aa20.72■□□□□ 0.91
ARHGEF1-213ENST00000595897 KCNF1Q9H3M0 494 aa20.72■□□□□ 0.91
ARHGEF1-213ENST00000595897 NALCNQ8IZF0 1738 aa20.72■□□□□ 0.91
ARHGEF1-213ENST00000595897 FAM208AQ9UK61 1670 aaKnown RBP20.72■□□□□ 0.91
ARHGEF1-213ENST00000595897 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.71■□□□□ 0.91
ARHGEF1-213ENST00000595897 LTKP29376 864 aa20.71■□□□□ 0.91
ARHGEF1-213ENST00000595897 MAP3K11Q16584 847 aa20.71■□□□□ 0.91
ARHGEF1-213ENST00000595897 TM6SF1Q9BZW5 370 aa20.71■□□□□ 0.91
ARHGEF1-213ENST00000595897 NUP62CLQ9H1M0 184 aa20.71■□□□□ 0.91
ARHGEF1-213ENST00000595897 PPP4R3BQ5MIZ7 849 aa20.7■□□□□ 0.9
ARHGEF1-213ENST00000595897 C14orf37Q86TY3 774 aa20.7■□□□□ 0.9
ARHGEF1-213ENST00000595897 FAM200AQ8TCP9 573 aa20.7■□□□□ 0.9
ARHGEF1-213ENST00000595897 BCL2L12Q9HB09 334 aa20.7■□□□□ 0.9
ARHGEF1-213ENST00000595897 C9orf78Q9NZ63 289 aaPredicted RBP20.7■□□□□ 0.9
ARHGEF1-213ENST00000595897 AMOTL2Q9Y2J4 779 aa20.7■□□□□ 0.9
ARHGEF1-213ENST00000595897 FAM173BQ6P4H8 233 aa20.7■□□□□ 0.9
ARHGEF1-213ENST00000595897 KLHL34Q8N239 644 aa20.7■□□□□ 0.9
ARHGEF1-213ENST00000595897 CBX1P83916 185 aa20.69■□□□□ 0.9
ARHGEF1-213ENST00000595897 TTC6Q86TZ1 520 aa20.69■□□□□ 0.9
ARHGEF1-213ENST00000595897 DRC7Q8IY82 874 aa20.69■□□□□ 0.9
ARHGEF1-213ENST00000595897 RBM8AQ9Y5S9 174 aaKnown RBP20.69■□□□□ 0.9
ARHGEF1-213ENST00000595897 TPCN1Q9ULQ1 816 aa20.69■□□□□ 0.9
ARHGEF1-213ENST00000595897 CCDC171Q6TFL3 1326 aa20.69■□□□□ 0.9
ARHGEF1-213ENST00000595897 CKAP2LQ8IYA6 745 aa20.68■□□□□ 0.9
ARHGEF1-213ENST00000595897 EVI5LQ96CN4 794 aa20.68■□□□□ 0.9
ARHGEF1-213ENST00000595897 PA2G4Q9UQ80 394 aaKnown RBP20.68■□□□□ 0.9
ARHGEF1-213ENST00000595897 USP42Q9H9J4 1324 aaKnown RBP20.68■□□□□ 0.9
ARHGEF1-213ENST00000595897 EIF4A1P60842 406 aaKnown RBP20.68■□□□□ 0.9
ARHGEF1-213ENST00000595897 CDC37L1Q7L3B6 337 aa20.68■□□□□ 0.9
ARHGEF1-213ENST00000595897 AACSQ86V21 672 aa20.68■□□□□ 0.9
ARHGEF1-213ENST00000595897 LUZP1Q86V48 1076 aa20.68■□□□□ 0.9
ARHGEF1-213ENST00000595897 RIOK3O14730 519 aaKnown RBP20.67■□□□□ 0.9
ARHGEF1-213ENST00000595897 PDCP20941 246 aa20.67■□□□□ 0.9
ARHGEF1-213ENST00000595897 ST3GAL1Q11201 340 aa20.67■□□□□ 0.9
ARHGEF1-213ENST00000595897 NECTIN1Q15223 517 aa20.67■□□□□ 0.9
ARHGEF1-213ENST00000595897 CREB3L3Q68CJ9 461 aa20.67■□□□□ 0.9
ARHGEF1-213ENST00000595897 CHMP4AQ9BY43 222 aa20.67■□□□□ 0.9
ARHGEF1-213ENST00000595897 TNMDQ9H2S6 317 aa20.67■□□□□ 0.9
ARHGEF1-213ENST00000595897 LIG1P18858 919 aa20.67■□□□□ 0.9
ARHGEF1-213ENST00000595897 PTGS1P23219 599 aa20.67■□□□□ 0.9
ARHGEF1-213ENST00000595897 TYRO3Q06418 890 aa20.67■□□□□ 0.9
ARHGEF1-213ENST00000595897 ABTB2Q8N961 1025 aa20.67■□□□□ 0.9
ARHGEF1-213ENST00000595897 PSMA5P28066 241 aa20.67■□□□□ 0.9
ARHGEF1-213ENST00000595897 TCEANC2Q96MN5 208 aa20.67■□□□□ 0.9
ARHGEF1-213ENST00000595897 TOPAZ1Q8N9V7 1692 aa20.66■□□□□ 0.9
ARHGEF1-213ENST00000595897 PDCL2Q8N4E4 241 aa20.66■□□□□ 0.9
ARHGEF1-213ENST00000595897 FMN2Q9NZ56 1722 aa20.66■□□□□ 0.9
ARHGEF1-213ENST00000595897 FAM227BQ96M60 508 aa20.66■□□□□ 0.9
ARHGEF1-213ENST00000595897 LGR6Q9HBX8 967 aa20.66■□□□□ 0.9
ARHGEF1-213ENST00000595897 DACT1Q9NYF0 836 aa20.66■□□□□ 0.9
ARHGEF1-213ENST00000595897 PTPRUQ92729 1446 aa20.65■□□□□ 0.9
ARHGEF1-213ENST00000595897 ERC1Q8IUD2 1116 aa20.65■□□□□ 0.9
ARHGEF1-213ENST00000595897 TEFQ10587 303 aa20.65■□□□□ 0.9
ARHGEF1-213ENST00000595897 TFIP11Q9UBB9 837 aaKnown RBP20.65■□□□□ 0.9
ARHGEF1-213ENST00000595897 MRVI1Q9Y6F6 885 aa20.65■□□□□ 0.9
ARHGEF1-213ENST00000595897 KCNQ3O43525 872 aa20.64■□□□□ 0.9
ARHGEF1-213ENST00000595897 SPATA32Q96LK8 384 aa20.64■□□□□ 0.9
ARHGEF1-213ENST00000595897 EID1Q9Y6B2 187 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms