RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PDZRN3Q9UPQ7 1066 aa21.88■■□□□ 1.09
LIG1-205ENST00000593425 DCTN1Q14203 1278 aa21.87■■□□□ 1.09
LIG1-205ENST00000593425 VEGFAP15692 232 aaPredicted RBP21.86■■□□□ 1.09
LIG1-205ENST00000593425 LAMB4A4D0S4 1761 aa21.86■■□□□ 1.09
LIG1-205ENST00000593425 DLG5Q8TDM6 1919 aa21.85■■□□□ 1.09
LIG1-205ENST00000593425 ST5P78524 1137 aa21.85■■□□□ 1.09
LIG1-205ENST00000593425 RTF1Q92541 710 aaKnown RBP21.85■■□□□ 1.09
LIG1-205ENST00000593425 POTECB2RU33 542 aa21.84■■□□□ 1.09
LIG1-205ENST00000593425 NPHP1O15259 732 aa21.84■■□□□ 1.09
LIG1-205ENST00000593425 SNRPA1P09661 255 aaKnown RBP21.84■■□□□ 1.09
LIG1-205ENST00000593425 SRGNP10124 158 aa21.83■■□□□ 1.09
LIG1-205ENST00000593425 STYK1Q6J9G0 422 aa21.83■■□□□ 1.09
LIG1-205ENST00000593425 JMYQ8N9B5 988 aa21.83■■□□□ 1.09
LIG1-205ENST00000593425 KDM3BQ7LBC6 1761 aa21.82■■□□□ 1.08
LIG1-205ENST00000593425 NBPF26B4DH59 902 aa21.82■■□□□ 1.08
LIG1-205ENST00000593425 ERFEQ4G0M1 354 aa21.82■■□□□ 1.08
LIG1-205ENST00000593425 PRPF40BQ6NWY9 871 aaKnown RBP21.82■■□□□ 1.08
LIG1-205ENST00000593425 NBPF10Q6P3W6 841 aaKnown RBP21.82■■□□□ 1.08
LIG1-205ENST00000593425 NBPF15Q8N660 670 aa21.82■■□□□ 1.08
LIG1-205ENST00000593425 CNKSR1Q969H4 720 aa21.82■■□□□ 1.08
LIG1-205ENST00000593425 LTBP3Q9NS15 1303 aa21.81■■□□□ 1.08
LIG1-205ENST00000593425 TAOK3Q9H2K8 898 aa21.81■■□□□ 1.08
LIG1-205ENST00000593425 CLEC4GQ6UXB4 293 aa21.8■■□□□ 1.08
LIG1-205ENST00000593425 NBPF5PQ86XG9 351 aaPredicted RBP21.8■■□□□ 1.08
LIG1-205ENST00000593425 MASTLQ96GX5 879 aa21.8■■□□□ 1.08
LIG1-205ENST00000593425 HTATSF1O43719 755 aaKnown RBP21.79■■□□□ 1.08
LIG1-205ENST00000593425 DPY19L2Q6NUT2 758 aa21.79■■□□□ 1.08
LIG1-205ENST00000593425 ZNF652Q9Y2D9 606 aa21.79■■□□□ 1.08
LIG1-205ENST00000593425 MIS18AQ9NYP9 233 aa21.78■■□□□ 1.08
LIG1-205ENST00000593425 TAF7Q15545 349 aaPredicted RBP21.76■■□□□ 1.07
LIG1-205ENST00000593425 NIP7Q9Y221 180 aaKnown RBP eCLIP21.76■■□□□ 1.07
LIG1-205ENST00000593425 FAM177BA6PVY3 158 aa21.75■■□□□ 1.07
LIG1-205ENST00000593425 DDNO94850 711 aaPredicted RBP21.75■■□□□ 1.07
LIG1-205ENST00000593425 HLFQ16534 295 aa21.75■■□□□ 1.07
LIG1-205ENST00000593425 SOGA3Q5TF21 947 aa21.75■■□□□ 1.07
LIG1-205ENST00000593425 C7orf43Q8WVR3 580 aa21.75■■□□□ 1.07
LIG1-205ENST00000593425 NUP98P52948 1817 aa21.74■■□□□ 1.07
LIG1-205ENST00000593425 KLRG2A4D1S0 409 aaPredicted RBP21.74■■□□□ 1.07
LIG1-205ENST00000593425 RGL2O15211 777 aa21.73■■□□□ 1.07
LIG1-205ENST00000593425 NPR1P16066 1061 aa21.73■■□□□ 1.07
LIG1-205ENST00000593425 CCDC93Q567U6 631 aa21.73■■□□□ 1.07
LIG1-205ENST00000593425 TPTE2Q6XPS3 522 aa21.73■■□□□ 1.07
LIG1-205ENST00000593425 POTEIP0CG38 1075 aa21.72■■□□□ 1.07
LIG1-205ENST00000593425 POTEJP0CG39 1038 aa21.72■■□□□ 1.07
LIG1-205ENST00000593425 COL13A1Q5TAT6 717 aaPredicted RBP21.72■■□□□ 1.07
LIG1-205ENST00000593425 OLFM4Q6UX06 510 aa21.72■■□□□ 1.07
LIG1-205ENST00000593425 PLEKHF1Q96S99 279 aa21.71■■□□□ 1.07
LIG1-205ENST00000593425 SCN4AP35499 1836 aa21.71■■□□□ 1.07
LIG1-205ENST00000593425 NGEFQ8N5V2 710 aa21.7■■□□□ 1.06
LIG1-205ENST00000593425 THUMPD2Q9BTF0 503 aaKnown RBP21.7■■□□□ 1.06
LIG1-205ENST00000593425 ABCC12Q96J65 1359 aa21.7■■□□□ 1.06
LIG1-205ENST00000593425 FKBP4Q02790 459 aaKnown RBP eCLIP21.69■■□□□ 1.06
LIG1-205ENST00000593425 CHADLQ6NUI6 762 aa21.69■■□□□ 1.06
LIG1-205ENST00000593425 NEFMP07197 916 aa21.68■■□□□ 1.06
LIG1-205ENST00000593425 EIF4A1P60842 406 aaKnown RBP21.68■■□□□ 1.06
LIG1-205ENST00000593425 PNISRQ8TF01 805 aaKnown RBP21.68■■□□□ 1.06
LIG1-205ENST00000593425 ZNF277Q9NRM2 450 aaPredicted RBP21.68■■□□□ 1.06
LIG1-205ENST00000593425 ZNF541Q9H0D2 1346 aa21.68■■□□□ 1.06
LIG1-205ENST00000593425 SNED1Q8TER0 1413 aa21.67■■□□□ 1.06
LIG1-205ENST00000593425 NFE2L2Q16236 605 aa21.67■■□□□ 1.06
LIG1-205ENST00000593425 TTLL7Q6ZT98 887 aa21.67■■□□□ 1.06
LIG1-205ENST00000593425 MAP3K15Q6ZN16 1313 aa21.66■■□□□ 1.06
LIG1-205ENST00000593425 NUTM1Q86Y26 1132 aa21.66■■□□□ 1.06
LIG1-205ENST00000593425 L3MBTL3Q96JM7 780 aaPredicted RBP21.66■■□□□ 1.06
LIG1-205ENST00000593425 RRP7AQ9Y3A4 280 aaKnown RBP21.66■■□□□ 1.06
LIG1-205ENST00000593425 ERVV-1B6SEH8 477 aa21.65■■□□□ 1.06
LIG1-205ENST00000593425 HSPA1AP0DMV8 641 aaKnown RBP21.65■■□□□ 1.06
LIG1-205ENST00000593425 HSPA1BP0DMV9 641 aaKnown RBP21.65■■□□□ 1.06
LIG1-205ENST00000593425 GTF2E1P29083 439 aaPredicted RBP21.65■■□□□ 1.06
LIG1-205ENST00000593425 ADAMTSL1Q8N6G6 1762 aa21.65■■□□□ 1.06
LIG1-205ENST00000593425 UBN2Q6ZU65 1347 aa21.64■■□□□ 1.05
LIG1-205ENST00000593425 IQCA1LA6NCM1 817 aa21.64■■□□□ 1.05
LIG1-205ENST00000593425 MYL6BP14649 208 aa21.64■■□□□ 1.05
LIG1-205ENST00000593425 ALDH1B1P30837 517 aa21.64■■□□□ 1.05
LIG1-205ENST00000593425 CRY2Q49AN0 593 aa21.64■■□□□ 1.05
LIG1-205ENST00000593425 RTKN2Q8IZC4 609 aa21.64■■□□□ 1.05
LIG1-205ENST00000593425 TAF1DQ9H5J8 278 aaPredicted RBP21.64■■□□□ 1.05
LIG1-205ENST00000593425 KIF6Q6ZMV9 814 aa21.63■■□□□ 1.05
LIG1-205ENST00000593425 NYXQ9GZU5 481 aa21.63■■□□□ 1.05
LIG1-205ENST00000593425 ZBTB3Q9H5J0 574 aa21.63■■□□□ 1.05
LIG1-205ENST00000593425 CREBZFQ9NS37 354 aa21.63■■□□□ 1.05
LIG1-205ENST00000593425 COL4A5P29400 1685 aa21.63■■□□□ 1.05
LIG1-205ENST00000593425 MAPK8IP3Q9UPT6 1336 aa21.62■■□□□ 1.05
LIG1-205ENST00000593425 GPTP24298 496 aa21.62■■□□□ 1.05
LIG1-205ENST00000593425 IARSP41252 1262 aaKnown RBP21.62■■□□□ 1.05
LIG1-205ENST00000593425 LDHDQ86WU2 507 aa21.62■■□□□ 1.05
LIG1-205ENST00000593425 SYNE4Q8N205 404 aa21.62■■□□□ 1.05
LIG1-205ENST00000593425 RIC1Q4ADV7 1423 aa21.62■■□□□ 1.05
LIG1-205ENST00000593425 IBTKQ9P2D0 1353 aaPredicted RBP21.61■■□□□ 1.05
LIG1-205ENST00000593425 PASKQ96RG2 1323 aa21.61■■□□□ 1.05
LIG1-205ENST00000593425 PCNTO95613 3336 aa21.61■■□□□ 1.05
LIG1-205ENST00000593425 MKRN1Q9UHC7 482 aaKnown RBP21.61■■□□□ 1.05
LIG1-205ENST00000593425 SUSD4Q5VX71 490 aa21.6■■□□□ 1.05
LIG1-205ENST00000593425 SLC51AQ86UW1 340 aa21.6■■□□□ 1.05
LIG1-205ENST00000593425 RNF123Q5XPI4 1314 aa21.59■■□□□ 1.05
LIG1-205ENST00000593425 FZD9O00144 591 aa21.59■■□□□ 1.05
LIG1-205ENST00000593425 ZNF34Q8IZ26 560 aa21.59■■□□□ 1.05
LIG1-205ENST00000593425 LTBP1Q14766 1721 aa21.58■■□□□ 1.05
LIG1-205ENST00000593425 NTSR2O95665 410 aa21.58■■□□□ 1.05
LIG1-205ENST00000593425 EAPPQ56P03 285 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms