RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 INTS4Q96HW7 963 aaKnown RBP8.44□□□□□ -1.06
CDH8-214ENST00000585315 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.44□□□□□ -1.06
CDH8-214ENST00000585315 FSD2A1L4K1 749 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 PRPHP41219 470 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 SPATA24Q86W54 205 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 TMTC2Q8N394 836 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 RAI14Q9P0K7 980 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 GNG11P61952 73 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 PIP4K2BP78356 416 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 ATL3Q6DD88 541 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 CYB5RLQ6IPT4 315 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 CKAP2LQ8IYA6 745 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 KRI1Q8N9T8 703 aaKnown RBP8.43□□□□□ -1.06
CDH8-214ENST00000585315 PRG4Q92954 1404 aaPredicted RBP8.43□□□□□ -1.06
CDH8-214ENST00000585315 ZFYP08048 801 aaPredicted RBP8.43□□□□□ -1.06
CDH8-214ENST00000585315 ZNF76P36508 570 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 HLTFQ14527 1009 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDH8-214ENST00000585315 NUTM2GQ5VZR2 741 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 SAMD1Q6SPF0 538 aaPredicted RBP8.43□□□□□ -1.06
CDH8-214ENST00000585315 RBM42Q9BTD8 480 aaKnown RBP8.43□□□□□ -1.06
CDH8-214ENST00000585315 IFT140Q96RY7 1462 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 HSPA4P34932 840 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 UBA7P41226 1012 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 NOLC1Q14978 699 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDH8-214ENST00000585315 SLF2Q8IX21 1173 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 HMGXB3Q12766 1538 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 GOLGA8BA8MQT2 603 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 CYLC1P35663 651 aaPredicted RBP8.43□□□□□ -1.06
CDH8-214ENST00000585315 IARSP41252 1262 aaKnown RBP8.43□□□□□ -1.06
CDH8-214ENST00000585315 ATP2B2Q01814 1243 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 TRAF1Q13077 416 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 METTL24Q5JXM2 366 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 TTC22Q5TAA0 569 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 CATIPQ7Z7H3 387 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 FMNL3Q8IVF7 1028 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 SCAF11Q99590 1463 aaKnown RBP8.43□□□□□ -1.06
CDH8-214ENST00000585315 PTPN23Q9H3S7 1636 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 ZSCAN22P10073 491 aaPredicted RBP8.43□□□□□ -1.06
CDH8-214ENST00000585315 CAVIN4Q5BKX8 364 aa8.43□□□□□ -1.06
CDH8-214ENST00000585315 STMN4Q9H169 189 aaPredicted RBP8.43□□□□□ -1.06
CDH8-214ENST00000585315 RBM27Q9P2N5 1060 aaKnown RBP8.43□□□□□ -1.06
CDH8-214ENST00000585315 IFIT5Q13325 482 aaKnown RBP8.42□□□□□ -1.06
CDH8-214ENST00000585315 ZSCAN23Q3MJ62 389 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 TMC6Q7Z403 805 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 PRKCSHP14314 528 aaPredicted RBP8.42□□□□□ -1.06
CDH8-214ENST00000585315 TERF1P54274 439 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 FLIIQ13045 1269 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 TDRD12Q587J7 1177 aaKnown RBP8.42□□□□□ -1.06
CDH8-214ENST00000585315 PRDM11Q9NQV5 511 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 KIAA0586Q9BVV6 1533 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 HCLS1P14317 486 aaPredicted RBP8.42□□□□□ -1.06
CDH8-214ENST00000585315 GTF2F1P35269 517 aaKnown RBP eCLIP8.42□□□□□ -1.06
CDH8-214ENST00000585315 MNAT1P51948 309 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 POGZQ7Z3K3 1410 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 CALML4Q96GE6 196 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 SLU7O95391 586 aaKnown RBP8.42□□□□□ -1.06
CDH8-214ENST00000585315 SKILP12757 684 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 PROSER2Q86WR7 435 aaPredicted RBP8.42□□□□□ -1.06
CDH8-214ENST00000585315 TTC14Q96N46 770 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 TMOD2Q9NZR1 351 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 CUL7Q14999 1698 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 OPA1O60313 960 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 MYL6BP14649 208 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 SSRP1Q08945 709 aaKnown RBP8.42□□□□□ -1.06
CDH8-214ENST00000585315 USP37Q86T82 979 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 NUTM1Q86Y26 1132 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 ANKRD24Q8TF21 1146 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 PIK3R4Q99570 1358 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 LMAN1P49257 510 aa8.42□□□□□ -1.06
CDH8-214ENST00000585315 NSRP1Q9H0G5 558 aaKnown RBP8.42□□□□□ -1.06
CDH8-214ENST00000585315 CTAGE15A4D2H0 777 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 AKR1B10O60218 316 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 CTAGE8P0CG41 777 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 XRCC6P12956 609 aaKnown RBP eCLIP8.41□□□□□ -1.06
CDH8-214ENST00000585315 MTIF2P46199 727 aaKnown RBP8.41□□□□□ -1.06
CDH8-214ENST00000585315 NUCB1Q02818 461 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 TOM1L2Q6ZVM7 507 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 CTAGE6Q86UF2 777 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 CTAGE4Q8IX94 777 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 NUDT16Q96DE0 195 aaKnown RBP8.41□□□□□ -1.06
CDH8-214ENST00000585315 FERMT1Q9BQL6 677 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 BOLA2Q9H3K6 86 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 ANKS4BQ8N8V4 417 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 CAMSAP2Q08AD1 1489 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 C20orf194Q5TEA3 1177 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 CCDC113Q9H0I3 377 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 MAP4K4O95819 1239 aaPredicted RBP8.41□□□□□ -1.06
CDH8-214ENST00000585315 GJB2P29033 226 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 SMC5Q8IY18 1101 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 ANKRD18BA2A2Z9 1011 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 N4BP3O15049 544 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 CCDC155Q8N6L0 562 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 NEK1Q96PY6 1258 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 MKNK2Q9HBH9 465 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 STRN4Q9NRL3 753 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 ABCF2Q9UG63 623 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 ANKRD36BQ8N2N9 1353 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 PPP4R3AQ6IN85 833 aa8.41□□□□□ -1.06
CDH8-214ENST00000585315 SYKP43405 635 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 CCDC178Q5BJE1 867 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms