RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, humanhuman

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-215ENST00000582985 CCDC24Q8N4L8 307 aa12.8□□□□□ -0.36
DDX42-215ENST00000582985 SMC1BQ8NDV3 1235 aa12.8□□□□□ -0.36
DDX42-215ENST00000582985 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
DDX42-215ENST00000582985 ZNF622Q969S3 477 aaKnown RBP eCLIP12.8□□□□□ -0.362e-10■□□□□ 8.1
DDX42-215ENST00000582985 CFAP53Q96M91 514 aa12.8□□□□□ -0.36
DDX42-215ENST00000582985 BRIP1Q9BX63 1249 aa12.8□□□□□ -0.36
DDX42-215ENST00000582985 RSPH6AQ9H0K4 717 aa12.8□□□□□ -0.36
DDX42-215ENST00000582985 PDZRN3Q9UPQ7 1066 aa12.8□□□□□ -0.36
DDX42-215ENST00000582985 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
DDX42-215ENST00000582985 CAMTA2O94983 1202 aa12.79□□□□□ -0.36
DDX42-215ENST00000582985 NPM2Q86SE8 214 aaKnown RBP12.79□□□□□ -0.36
DDX42-215ENST00000582985 KLRG1Q96E93 195 aa12.79□□□□□ -0.36
DDX42-215ENST00000582985 TIAM2Q8IVF5 1701 aa12.79□□□□□ -0.36
DDX42-215ENST00000582985 VEGFAP15692 232 aaPredicted RBP12.78□□□□□ -0.36
DDX42-215ENST00000582985 SETDB2Q96T68 719 aa12.78□□□□□ -0.36
DDX42-215ENST00000582985 COL11A2P13942 1736 aaPredicted RBP12.78□□□□□ -0.36
DDX42-215ENST00000582985 C21orf2O43822 256 aa12.77□□□□□ -0.37
DDX42-215ENST00000582985 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
DDX42-215ENST00000582985 DZIP3Q86Y13 1208 aaKnown RBP12.77□□□□□ -0.37
DDX42-215ENST00000582985 JMYQ8N9B5 988 aa12.77□□□□□ -0.37
DDX42-215ENST00000582985 CNBD1Q8NA66 436 aa12.77□□□□□ -0.37
DDX42-215ENST00000582985 NUDCQ9Y266 331 aa12.77□□□□□ -0.37
DDX42-215ENST00000582985 USP16Q9Y5T5 823 aa12.77□□□□□ -0.37
DDX42-215ENST00000582985 CCDC88AQ3V6T2 1871 aa12.76□□□□□ -0.37
DDX42-215ENST00000582985 PRAMEF22A3QJZ6 481 aa12.76□□□□□ -0.37
DDX42-215ENST00000582985 NPHP1O15259 732 aa12.76□□□□□ -0.37
DDX42-215ENST00000582985 U2AF1L5P0DN76 240 aaPredicted RBP12.76□□□□□ -0.37
DDX42-215ENST00000582985 PIP4K2AP48426 406 aaPredicted RBP12.76□□□□□ -0.37
DDX42-215ENST00000582985 ST5P78524 1137 aa12.76□□□□□ -0.37
DDX42-215ENST00000582985 U2AF1Q01081 240 aaKnown RBP eCLIP12.76□□□□□ -0.37
DDX42-215ENST00000582985 MCM10Q7L590 875 aa12.76□□□□□ -0.37
DDX42-215ENST00000582985 RTF1Q92541 710 aaKnown RBP12.76□□□□□ -0.37
DDX42-215ENST00000582985 BCORQ6W2J9 1755 aa12.76□□□□□ -0.37
DDX42-215ENST00000582985 SRGNP10124 158 aa12.75□□□□□ -0.37
DDX42-215ENST00000582985 PPP2R1AP30153 589 aa12.75□□□□□ -0.37
DDX42-215ENST00000582985 ERFEQ4G0M1 354 aa12.75□□□□□ -0.37
DDX42-215ENST00000582985 STYK1Q6J9G0 422 aa12.75□□□□□ -0.37
DDX42-215ENST00000582985 DPY19L2Q6NUT2 758 aa12.75□□□□□ -0.37
DDX42-215ENST00000582985 CNKSR1Q969H4 720 aa12.75□□□□□ -0.37
DDX42-215ENST00000582985 FER1L6Q2WGJ9 1857 aa12.74□□□□□ -0.37
DDX42-215ENST00000582985 LTBP3Q9NS15 1303 aa12.74□□□□□ -0.37
DDX42-215ENST00000582985 POTECB2RU33 542 aa12.74□□□□□ -0.37
DDX42-215ENST00000582985 SNRPA1P09661 255 aaKnown RBP12.74□□□□□ -0.37
DDX42-215ENST00000582985 PRPF40BQ6NWY9 871 aaKnown RBP12.74□□□□□ -0.37
DDX42-215ENST00000582985 CLEC4GQ6UXB4 293 aa12.74□□□□□ -0.37
DDX42-215ENST00000582985 TAOK3Q9H2K8 898 aa12.74□□□□□ -0.37
DDX42-215ENST00000582985 MKRN4PQ13434 485 aaPredicted RBP12.73□□□□□ -0.37
DDX42-215ENST00000582985 DCTN1Q14203 1278 aa12.73□□□□□ -0.37
DDX42-215ENST00000582985 NBPF5PQ86XG9 351 aaPredicted RBP12.73□□□□□ -0.37
DDX42-215ENST00000582985 MASTLQ96GX5 879 aa12.73□□□□□ -0.37
DDX42-215ENST00000582985 ZNF652Q9Y2D9 606 aa12.73□□□□□ -0.37
DDX42-215ENST00000582985 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
DDX42-215ENST00000582985 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
DDX42-215ENST00000582985 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
DDX42-215ENST00000582985 SOGA3Q5TF21 947 aa12.72□□□□□ -0.37
DDX42-215ENST00000582985 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
DDX42-215ENST00000582985 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
DDX42-215ENST00000582985 DICER1Q9UPY3 1922 aaKnown RBP12.72□□□□□ -0.37
DDX42-215ENST00000582985 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.38
DDX42-215ENST00000582985 CACNA1SQ13698 1873 aa12.7□□□□□ -0.38
DDX42-215ENST00000582985 RGL2O15211 777 aa12.7□□□□□ -0.38
DDX42-215ENST00000582985 NPR1P16066 1061 aa12.7□□□□□ -0.38
DDX42-215ENST00000582985 TAF7Q15545 349 aaPredicted RBP12.7□□□□□ -0.38
DDX42-215ENST00000582985 COL13A1Q5TAT6 717 aaPredicted RBP12.7□□□□□ -0.38
DDX42-215ENST00000582985 C7orf43Q8WVR3 580 aa12.7□□□□□ -0.38
DDX42-215ENST00000582985 NIP7Q9Y221 180 aaKnown RBP eCLIP12.7□□□□□ -0.38
DDX42-215ENST00000582985 KLRG2A4D1S0 409 aaPredicted RBP12.69□□□□□ -0.38
DDX42-215ENST00000582985 DDNO94850 711 aaPredicted RBP12.69□□□□□ -0.38
DDX42-215ENST00000582985 TPTE2Q6XPS3 522 aa12.69□□□□□ -0.38
DDX42-215ENST00000582985 MIS18AQ9NYP9 233 aa12.69□□□□□ -0.38
DDX42-215ENST00000582985 PCNTO95613 3336 aa12.69□□□□□ -0.38
DDX42-215ENST00000582985 HLFQ16534 295 aa12.68□□□□□ -0.38
DDX42-215ENST00000582985 CCDC93Q567U6 631 aa12.68□□□□□ -0.38
DDX42-215ENST00000582985 FAM177BA6PVY3 158 aa12.67□□□□□ -0.38
DDX42-215ENST00000582985 POTEIP0CG38 1075 aa12.67□□□□□ -0.38
DDX42-215ENST00000582985 POTEJP0CG39 1038 aa12.67□□□□□ -0.38
DDX42-215ENST00000582985 CHADLQ6NUI6 762 aa12.67□□□□□ -0.38
DDX42-215ENST00000582985 LAMB4A4D0S4 1761 aa12.66□□□□□ -0.38
DDX42-215ENST00000582985 NEFMP07197 916 aa12.66□□□□□ -0.38
DDX42-215ENST00000582985 FKBP4Q02790 459 aaKnown RBP eCLIP12.66□□□□□ -0.38
DDX42-215ENST00000582985 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
DDX42-215ENST00000582985 PNISRQ8TF01 805 aaKnown RBP12.66□□□□□ -0.38
DDX42-215ENST00000582985 L3MBTL3Q96JM7 780 aaPredicted RBP12.66□□□□□ -0.38
DDX42-215ENST00000582985 IQCA1LA6NCM1 817 aa12.65□□□□□ -0.38
DDX42-215ENST00000582985 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
DDX42-215ENST00000582985 HAX1O00165 279 aa12.65□□□□□ -0.38
DDX42-215ENST00000582985 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
DDX42-215ENST00000582985 HSPA1AP0DMV8 641 aaKnown RBP12.65□□□□□ -0.38
DDX42-215ENST00000582985 HSPA1BP0DMV9 641 aaKnown RBP12.65□□□□□ -0.38
DDX42-215ENST00000582985 GTF2E1P29083 439 aaPredicted RBP12.65□□□□□ -0.38
DDX42-215ENST00000582985 ALDH1B1P30837 517 aa12.65□□□□□ -0.38
DDX42-215ENST00000582985 EVX2Q03828 476 aa12.65□□□□□ -0.38
DDX42-215ENST00000582985 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
DDX42-215ENST00000582985 RTKN2Q8IZC4 609 aa12.65□□□□□ -0.38
DDX42-215ENST00000582985 NGEFQ8N5V2 710 aa12.65□□□□□ -0.38
DDX42-215ENST00000582985 PLEKHF1Q96S99 279 aa12.65□□□□□ -0.38
DDX42-215ENST00000582985 ZNF277Q9NRM2 450 aaPredicted RBP12.65□□□□□ -0.38
DDX42-215ENST00000582985 CREBZFQ9NS37 354 aa12.65□□□□□ -0.38
DDX42-215ENST00000582985 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
DDX42-215ENST00000582985 ERVV-1B6SEH8 477 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms