RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 ZNF541Q9H0D2 1346 aa3.49□□□□□ -1.85
CTC1-207ENST00000580299 CD163L1Q9NR16 1453 aa3.49□□□□□ -1.85
CTC1-207ENST00000580299 SPDYE4A6NLX3 237 aa3.49□□□□□ -1.85
CTC1-207ENST00000580299 TRAF5O00463 557 aa3.49□□□□□ -1.85
CTC1-207ENST00000580299 EIF6P56537 245 aaKnown RBP3.49□□□□□ -1.85
CTC1-207ENST00000580299 KIF23Q02241 960 aaPredicted RBP3.49□□□□□ -1.85
CTC1-207ENST00000580299 DDR1Q08345 913 aa3.49□□□□□ -1.85
CTC1-207ENST00000580299 RC3H1Q5TC82 1133 aaKnown RBP3.49□□□□□ -1.85
CTC1-207ENST00000580299 RGMBQ6NW40 437 aa3.49□□□□□ -1.85
CTC1-207ENST00000580299 SYNE4Q8N205 404 aa3.49□□□□□ -1.85
CTC1-207ENST00000580299 ZNF622Q969S3 477 aaKnown RBP eCLIP3.49□□□□□ -1.85
CTC1-207ENST00000580299 TMOD3Q9NYL9 352 aa3.49□□□□□ -1.85
CTC1-207ENST00000580299 RAPGEFL1Q9UHV5 662 aa3.49□□□□□ -1.85
CTC1-207ENST00000580299 HCN4Q9Y3Q4 1203 aa3.49□□□□□ -1.85
CTC1-207ENST00000580299 NR2E3Q9Y5X4 410 aa3.49□□□□□ -1.85
CTC1-207ENST00000580299 KDM3BQ7LBC6 1761 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 MAP3K19Q56UN5 1328 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 TTC21BQ7Z4L5 1316 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 CNTNAP4Q9C0A0 1308 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 USP42Q9H9J4 1324 aaKnown RBP3.48□□□□□ -1.85
CTC1-207ENST00000580299 TJP1Q07157 1748 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 TNFRSF10AO00220 468 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 POLRMTO00411 1230 aaKnown RBP3.48□□□□□ -1.85
CTC1-207ENST00000580299 FKTNO75072 461 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 ZPR1O75312 459 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 RPS6KA4O75676 772 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 TATP17735 454 aaPredicted RBP3.48□□□□□ -1.85
CTC1-207ENST00000580299 PDE6BP35913 854 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 ITGAEP38570 1179 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 ZNF157P51786 506 aaPredicted RBP3.48□□□□□ -1.85
CTC1-207ENST00000580299 FMR1Q06787 632 aaKnown RBP eCLIP3.48□□□□□ -1.85
CTC1-207ENST00000580299 MAP3K12Q12852 859 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 ITPK1Q13572 414 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 FKBP8Q14318 412 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 CCDC93Q567U6 631 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 NOM1Q5C9Z4 860 aaKnown RBP3.48□□□□□ -1.85
CTC1-207ENST00000580299 C2orf69Q8N8R5 385 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 ZNF296Q8WUU4 475 aaPredicted RBP3.48□□□□□ -1.85
CTC1-207ENST00000580299 JDP2Q8WYK2 163 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 DPF3Q92784 378 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 LTV1Q96GA3 475 aaPredicted RBP3.48□□□□□ -1.85
CTC1-207ENST00000580299 HTATIP2Q9BUP3 242 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 ARIH1Q9Y4X5 557 aaPredicted RBP3.48□□□□□ -1.85
CTC1-207ENST00000580299 GJA3Q9Y6H8 435 aa3.48□□□□□ -1.85
CTC1-207ENST00000580299 ZNF646O15015 1829 aaPredicted RBP3.48□□□□□ -1.85
CTC1-207ENST00000580299 RANBP2P49792 3224 aaKnown RBP3.48□□□□□ -1.85
CTC1-207ENST00000580299 RPTORQ8N122 1335 aa3.47□□□□□ -1.85
CTC1-207ENST00000580299 CENPFP49454 3210 aa3.47□□□□□ -1.85
CTC1-207ENST00000580299 SCN7AQ01118 1682 aa3.47□□□□□ -1.85
CTC1-207ENST00000580299 NPHP1O15259 732 aa3.47□□□□□ -1.85
CTC1-207ENST00000580299 EN2P19622 333 aaPredicted RBP3.47□□□□□ -1.85
CTC1-207ENST00000580299 SLC4A8Q2Y0W8 1093 aa3.47□□□□□ -1.85
CTC1-207ENST00000580299 SPDYE1Q8NFV5 336 aaPredicted RBP3.47□□□□□ -1.85
CTC1-207ENST00000580299 CNKSR1Q969H4 720 aa3.47□□□□□ -1.85
CTC1-207ENST00000580299 LRCH3Q96II8 777 aa3.47□□□□□ -1.85
CTC1-207ENST00000580299 ZIC5Q96T25 663 aa3.47□□□□□ -1.85
CTC1-207ENST00000580299 P2RX7Q99572 595 aaKnown RBP3.47□□□□□ -1.85
CTC1-207ENST00000580299 ADARB2Q9NS39 739 aaKnown RBP3.47□□□□□ -1.85
CTC1-207ENST00000580299 PIEZO1Q92508 2521 aa3.47□□□□□ -1.85
CTC1-207ENST00000580299 KDRP35968 1356 aa3.47□□□□□ -1.85
CTC1-207ENST00000580299 KTN1Q86UP2 1357 aaKnown RBP3.47□□□□□ -1.85
CTC1-207ENST00000580299 LAMB1P07942 1786 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 VCANP13611 3396 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 FAM155AB1AL88 458 aaPredicted RBP3.46□□□□□ -1.86
CTC1-207ENST00000580299 GPR25O00155 361 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 SOX1O00570 391 aaPredicted RBP3.46□□□□□ -1.86
CTC1-207ENST00000580299 SERPINB2P05120 415 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 SLC10A3P09131 477 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 IARSP41252 1262 aaKnown RBP3.46□□□□□ -1.86
CTC1-207ENST00000580299 FKBP4Q02790 459 aaKnown RBP eCLIP3.46□□□□□ -1.86
CTC1-207ENST00000580299 CDC37L1Q7L3B6 337 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 NBPF11Q86T75 865 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 PIGBQ92521 554 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 IP6K1Q92551 441 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 CSRNP1Q96S65 589 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 GLIS2Q9BZE0 524 aaPredicted RBP3.46□□□□□ -1.86
CTC1-207ENST00000580299 GBA2Q9HCG7 927 aaPredicted RBP3.46□□□□□ -1.86
CTC1-207ENST00000580299 MTMR10Q9NXD2 777 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 CABP1Q9NZU7 370 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 SRP68Q9UHB9 627 aaKnown RBP3.46□□□□□ -1.86
CTC1-207ENST00000580299 TRIM17Q9Y577 477 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 LAMA2P24043 3122 aaKnown RBP3.46□□□□□ -1.86
CTC1-207ENST00000580299 HTTP42858 3142 aa3.46□□□□□ -1.86
CTC1-207ENST00000580299 SPTBN5Q9NRC6 3674 aaKnown RBP3.46□□□□□ -1.86
CTC1-207ENST00000580299 DDX60Q8IY21 1712 aaKnown RBP3.45□□□□□ -1.86
CTC1-207ENST00000580299 TTC28Q96AY4 2481 aa3.45□□□□□ -1.86
CTC1-207ENST00000580299 FZD9O00144 591 aa3.45□□□□□ -1.86
CTC1-207ENST00000580299 TM4SF1P30408 202 aa3.45□□□□□ -1.86
CTC1-207ENST00000580299 FXR2P51116 673 aaKnown RBP eCLIP3.45□□□□□ -1.86
CTC1-207ENST00000580299 STYK1Q6J9G0 422 aa3.45□□□□□ -1.86
CTC1-207ENST00000580299 PRPF40BQ6NWY9 871 aaKnown RBP3.45□□□□□ -1.86
CTC1-207ENST00000580299 Q7L0L9 218 aa3.45□□□□□ -1.86
CTC1-207ENST00000580299 RTKN2Q8IZC4 609 aa3.45□□□□□ -1.86
CTC1-207ENST00000580299 ZC3H15Q8WU90 426 aaKnown RBP3.45□□□□□ -1.86
CTC1-207ENST00000580299 ARMC5Q96C12 935 aa3.45□□□□□ -1.86
CTC1-207ENST00000580299 C1QTNF1Q9BXJ1 281 aa3.45□□□□□ -1.86
CTC1-207ENST00000580299 PRO3102Q9H379 93 aa3.45□□□□□ -1.86
CTC1-207ENST00000580299 ZNF277Q9NRM2 450 aaPredicted RBP3.45□□□□□ -1.86
CTC1-207ENST00000580299 PRUNE2Q8WUY3 3088 aa3.45□□□□□ -1.86
CTC1-207ENST00000580299 BRCA2P51587 3418 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms