RNA–Protein interactions for RNA: ENST00000577640.1

UBB-205, Transcript of ubiquitin B, humanhuman

TSL 5

Gene UBB, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-205ENST00000577640 KDM3BQ7LBC6 1761 aa13.95□□□□□ -0.18
UBB-205ENST00000577640 SNRPA1P09661 255 aaKnown RBP13.94□□□□□ -0.18
UBB-205ENST00000577640 SRGNP10124 158 aa13.94□□□□□ -0.18
UBB-205ENST00000577640 ST5P78524 1137 aa13.94□□□□□ -0.18
UBB-205ENST00000577640 SOGA3Q5TF21 947 aa13.94□□□□□ -0.18
UBB-205ENST00000577640 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
UBB-205ENST00000577640 DZIP3Q86Y13 1208 aaKnown RBP13.94□□□□□ -0.18
UBB-205ENST00000577640 RTF1Q92541 710 aaKnown RBP13.94□□□□□ -0.18
UBB-205ENST00000577640 ZNF622Q969S3 477 aaKnown RBP eCLIP13.94□□□□□ -0.18
UBB-205ENST00000577640 NUP98P52948 1817 aa13.94□□□□□ -0.18
UBB-205ENST00000577640 C21orf2O43822 256 aa13.93□□□□□ -0.18
UBB-205ENST00000577640 U2AF1L5P0DN76 240 aaPredicted RBP13.93□□□□□ -0.18
UBB-205ENST00000577640 U2AF1Q01081 240 aaKnown RBP eCLIP13.93□□□□□ -0.18
UBB-205ENST00000577640 MASTLQ96GX5 879 aa13.93□□□□□ -0.18
UBB-205ENST00000577640 ZNF652Q9Y2D9 606 aa13.93□□□□□ -0.18
UBB-205ENST00000577640 POTECB2RU33 542 aa13.92□□□□□ -0.18
UBB-205ENST00000577640 CNGB1Q14028 1251 aaPredicted RBP13.92□□□□□ -0.18
UBB-205ENST00000577640 TAOK3Q9H2K8 898 aa13.92□□□□□ -0.18
UBB-205ENST00000577640 KLRG2A4D1S0 409 aaPredicted RBP13.91□□□□□ -0.18
UBB-205ENST00000577640 HTRA3P83110 453 aa13.91□□□□□ -0.18
UBB-205ENST00000577640 ERFEQ4G0M1 354 aa13.91□□□□□ -0.18
UBB-205ENST00000577640 MCM10Q7L590 875 aa13.91□□□□□ -0.18
UBB-205ENST00000577640 PRAMEF22A3QJZ6 481 aa13.9□□□□□ -0.18
UBB-205ENST00000577640 NPHP1O15259 732 aa13.9□□□□□ -0.18
UBB-205ENST00000577640 TAF7Q15545 349 aaPredicted RBP13.9□□□□□ -0.18
UBB-205ENST00000577640 PRPF40BQ6NWY9 871 aaKnown RBP13.9□□□□□ -0.18
UBB-205ENST00000577640 CCDC24Q8N4L8 307 aa13.9□□□□□ -0.18
UBB-205ENST00000577640 NBPF26B4DH59 902 aa13.89□□□□□ -0.19
UBB-205ENST00000577640 NBPF10Q6P3W6 841 aaKnown RBP13.89□□□□□ -0.19
UBB-205ENST00000577640 TPTE2Q6XPS3 522 aa13.89□□□□□ -0.19
UBB-205ENST00000577640 NBPF5PQ86XG9 351 aaPredicted RBP13.89□□□□□ -0.19
UBB-205ENST00000577640 NBPF15Q8N660 670 aa13.89□□□□□ -0.19
UBB-205ENST00000577640 C7orf43Q8WVR3 580 aa13.89□□□□□ -0.19
UBB-205ENST00000577640 NPR1P16066 1061 aa13.88□□□□□ -0.19
UBB-205ENST00000577640 PCNTO95613 3336 aa13.87□□□□□ -0.19
UBB-205ENST00000577640 PIP4K2AP48426 406 aaPredicted RBP13.87□□□□□ -0.19
UBB-205ENST00000577640 DCTN1Q14203 1278 aa13.87□□□□□ -0.19
UBB-205ENST00000577640 CCDC93Q567U6 631 aa13.87□□□□□ -0.19
UBB-205ENST00000577640 PNISRQ8TF01 805 aaKnown RBP13.87□□□□□ -0.19
UBB-205ENST00000577640 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
UBB-205ENST00000577640 NEFMP07197 916 aa13.86□□□□□ -0.19
UBB-205ENST00000577640 L3MBTL3Q96JM7 780 aaPredicted RBP13.86□□□□□ -0.19
UBB-205ENST00000577640 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
UBB-205ENST00000577640 RIC1Q4ADV7 1423 aa13.86□□□□□ -0.19
UBB-205ENST00000577640 IQCA1LA6NCM1 817 aa13.85□□□□□ -0.19
UBB-205ENST00000577640 ERVV-1B6SEH8 477 aa13.85□□□□□ -0.19
UBB-205ENST00000577640 ALDH1B1P30837 517 aa13.85□□□□□ -0.19
UBB-205ENST00000577640 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
UBB-205ENST00000577640 ADAMTSL1Q8N6G6 1762 aa13.85□□□□□ -0.19
UBB-205ENST00000577640 IBTKQ9P2D0 1353 aaPredicted RBP13.84□□□□□ -0.19
UBB-205ENST00000577640 DDNO94850 711 aaPredicted RBP13.84□□□□□ -0.19
UBB-205ENST00000577640 FKBP4Q02790 459 aaKnown RBP eCLIP13.84□□□□□ -0.19
UBB-205ENST00000577640 CRY2Q49AN0 593 aa13.84□□□□□ -0.19
UBB-205ENST00000577640 RTKN2Q8IZC4 609 aa13.84□□□□□ -0.19
UBB-205ENST00000577640 PLEKHF1Q96S99 279 aa13.84□□□□□ -0.19
UBB-205ENST00000577640 SNED1Q8TER0 1413 aa13.83□□□□□ -0.2
UBB-205ENST00000577640 HLFQ16534 295 aa13.83□□□□□ -0.2
UBB-205ENST00000577640 NYXQ9GZU5 481 aa13.83□□□□□ -0.2
UBB-205ENST00000577640 PNNQ9H307 717 aaKnown RBP13.83□□□□□ -0.2
UBB-205ENST00000577640 CREBZFQ9NS37 354 aa13.83□□□□□ -0.2
UBB-205ENST00000577640 ANKRD36CQ5JPF3 1778 aa13.82□□□□□ -0.2
UBB-205ENST00000577640 EIF4A1P60842 406 aaKnown RBP13.82□□□□□ -0.2
UBB-205ENST00000577640 COL13A1Q5TAT6 717 aaPredicted RBP13.82□□□□□ -0.2
UBB-205ENST00000577640 MIS18AQ9NYP9 233 aa13.82□□□□□ -0.2
UBB-205ENST00000577640 ERBB4Q15303 1308 aa13.82□□□□□ -0.2
UBB-205ENST00000577640 MAP3K15Q6ZN16 1313 aa13.82□□□□□ -0.2
UBB-205ENST00000577640 NFE2L2Q16236 605 aa13.81□□□□□ -0.2
UBB-205ENST00000577640 GRIPAP1Q4V328 841 aa13.81□□□□□ -0.2
UBB-205ENST00000577640 CC2D2BQ6DHV5 1058 aa13.81□□□□□ -0.2
UBB-205ENST00000577640 LDHDQ86WU2 507 aa13.81□□□□□ -0.2
UBB-205ENST00000577640 PSMD1Q99460 953 aa13.81□□□□□ -0.2
UBB-205ENST00000577640 PASKQ96RG2 1323 aa13.81□□□□□ -0.2
UBB-205ENST00000577640 FZD9O00144 591 aa13.8□□□□□ -0.2
UBB-205ENST00000577640 GTF2E1P29083 439 aaPredicted RBP13.8□□□□□ -0.2
UBB-205ENST00000577640 HOXA10P31260 410 aaPredicted RBP13.8□□□□□ -0.2
UBB-205ENST00000577640 TAF1DQ9H5J8 278 aaPredicted RBP13.8□□□□□ -0.2
UBB-205ENST00000577640 POTEIP0CG38 1075 aa13.79□□□□□ -0.2
UBB-205ENST00000577640 POTEJP0CG39 1038 aa13.79□□□□□ -0.2
UBB-205ENST00000577640 HSPA1AP0DMV8 641 aaKnown RBP13.79□□□□□ -0.2
UBB-205ENST00000577640 HSPA1BP0DMV9 641 aaKnown RBP13.79□□□□□ -0.2
UBB-205ENST00000577640 IARSP41252 1262 aaKnown RBP13.79□□□□□ -0.2
UBB-205ENST00000577640 KIF6Q6ZMV9 814 aa13.79□□□□□ -0.2
UBB-205ENST00000577640 BABAM1Q9NWV8 329 aa13.79□□□□□ -0.2
UBB-205ENST00000577640 ABCC12Q96J65 1359 aa13.79□□□□□ -0.2
UBB-205ENST00000577640 LAMB2P55268 1798 aa13.78□□□□□ -0.2
UBB-205ENST00000577640 PNMA8AQ86V59 439 aaPredicted RBP13.78□□□□□ -0.2
UBB-205ENST00000577640 ZNF34Q8IZ26 560 aa13.78□□□□□ -0.2
UBB-205ENST00000577640 GPC2Q8N158 579 aa13.78□□□□□ -0.2
UBB-205ENST00000577640 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
UBB-205ENST00000577640 HACL1Q9UJ83 578 aa13.78□□□□□ -0.2
UBB-205ENST00000577640 ZNF541Q9H0D2 1346 aa13.78□□□□□ -0.2
UBB-205ENST00000577640 FAM177BA6PVY3 158 aa13.77□□□□□ -0.21
UBB-205ENST00000577640 ITGBL1O95965 494 aaPredicted RBP13.77□□□□□ -0.21
UBB-205ENST00000577640 OLFM4Q6UX06 510 aa13.77□□□□□ -0.21
UBB-205ENST00000577640 GIGYF2Q6Y7W6 1299 aaKnown RBP13.77□□□□□ -0.21
UBB-205ENST00000577640 TTLL7Q6ZT98 887 aa13.77□□□□□ -0.21
UBB-205ENST00000577640 UBN2Q6ZU65 1347 aa13.77□□□□□ -0.21
UBB-205ENST00000577640 SYNE4Q8N205 404 aa13.77□□□□□ -0.21
UBB-205ENST00000577640 MAPK8IP3Q9UPT6 1336 aa13.77□□□□□ -0.21
UBB-205ENST00000577640 TRPM7Q96QT4 1865 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms