RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 CACNA1SQ13698 1873 aa18.67■□□□□ 0.58
CDC27-217ENST00000575483 PRR5LQ6MZQ0 368 aa18.66■□□□□ 0.58
CDC27-217ENST00000575483 BICDL1Q6ZP65 573 aa18.66■□□□□ 0.58
CDC27-217ENST00000575483 TTLL6Q8N841 843 aa18.66■□□□□ 0.58
CDC27-217ENST00000575483 KDM2BQ8NHM5 1336 aa18.66■□□□□ 0.58
CDC27-217ENST00000575483 SLX4Q8IY92 1834 aa18.65■□□□□ 0.58
CDC27-217ENST00000575483 BTBD11A6QL63 1104 aa18.65■□□□□ 0.58
CDC27-217ENST00000575483 CFAP53Q96M91 514 aa18.65■□□□□ 0.58
CDC27-217ENST00000575483 LAMB4A4D0S4 1761 aa18.65■□□□□ 0.58
CDC27-217ENST00000575483 PRAMEF22A3QJZ6 481 aa18.64■□□□□ 0.57
CDC27-217ENST00000575483 H0YIN7 160 aa18.64■□□□□ 0.57
CDC27-217ENST00000575483 LMNB1P20700 586 aa18.64■□□□□ 0.57
CDC27-217ENST00000575483 BRIP1Q9BX63 1249 aa18.64■□□□□ 0.57
CDC27-217ENST00000575483 USP16Q9Y5T5 823 aa18.64■□□□□ 0.57
CDC27-217ENST00000575483 KDM3BQ7LBC6 1761 aa18.63■□□□□ 0.57
CDC27-217ENST00000575483 IFFO2Q5TF58 517 aa18.63■□□□□ 0.57
CDC27-217ENST00000575483 MCM10Q7L590 875 aa18.63■□□□□ 0.57
CDC27-217ENST00000575483 U2AF1L5P0DN76 240 aaPredicted RBP18.62■□□□□ 0.57
CDC27-217ENST00000575483 U2AF1Q01081 240 aaKnown RBP eCLIP18.62■□□□□ 0.57
CDC27-217ENST00000575483 CCDC24Q8N4L8 307 aa18.62■□□□□ 0.57
CDC27-217ENST00000575483 RRAGCQ9HB90 399 aa18.62■□□□□ 0.57
CDC27-217ENST00000575483 FSTL1Q12841 308 aa18.61■□□□□ 0.57
CDC27-217ENST00000575483 NUDCQ9Y266 331 aa18.61■□□□□ 0.57
CDC27-217ENST00000575483 ZNF330Q9Y3S2 320 aaPredicted RBP18.61■□□□□ 0.57
CDC27-217ENST00000575483 PIP4K2AP48426 406 aaPredicted RBP18.6■□□□□ 0.57
CDC27-217ENST00000575483 DCTN1Q14203 1278 aa18.6■□□□□ 0.57
CDC27-217ENST00000575483 DZIP3Q86Y13 1208 aaKnown RBP18.6■□□□□ 0.57
CDC27-217ENST00000575483 PDZRN3Q9UPQ7 1066 aa18.6■□□□□ 0.57
CDC27-217ENST00000575483 GLTPD2A6NH11 291 aa18.59■□□□□ 0.57
CDC27-217ENST00000575483 NBPF26B4DH59 902 aa18.59■□□□□ 0.57
CDC27-217ENST00000575483 PDE6BP35913 854 aa18.59■□□□□ 0.57
CDC27-217ENST00000575483 NBPF10Q6P3W6 841 aaKnown RBP18.59■□□□□ 0.57
CDC27-217ENST00000575483 NBPF15Q8N660 670 aa18.59■□□□□ 0.57
CDC27-217ENST00000575483 HTATSF1O43719 755 aaKnown RBP18.58■□□□□ 0.56
CDC27-217ENST00000575483 SNRPA1P09661 255 aaKnown RBP18.58■□□□□ 0.56
CDC27-217ENST00000575483 HTRA3P83110 453 aa18.58■□□□□ 0.56
CDC27-217ENST00000575483 CNBD1Q8NA66 436 aa18.58■□□□□ 0.56
CDC27-217ENST00000575483 SETDB2Q96T68 719 aa18.58■□□□□ 0.56
CDC27-217ENST00000575483 LTBP3Q9NS15 1303 aa18.57■□□□□ 0.56
CDC27-217ENST00000575483 POTECB2RU33 542 aa18.57■□□□□ 0.56
CDC27-217ENST00000575483 SRGNP10124 158 aa18.57■□□□□ 0.56
CDC27-217ENST00000575483 C16orf71Q8IYS4 520 aaPredicted RBP18.57■□□□□ 0.56
CDC27-217ENST00000575483 RGL2O15211 777 aa18.56■□□□□ 0.56
CDC27-217ENST00000575483 C21orf2O43822 256 aa18.56■□□□□ 0.56
CDC27-217ENST00000575483 STYK1Q6J9G0 422 aa18.56■□□□□ 0.56
CDC27-217ENST00000575483 CLEC4GQ6UXB4 293 aa18.56■□□□□ 0.56
CDC27-217ENST00000575483 RTF1Q92541 710 aaKnown RBP18.56■□□□□ 0.56
CDC27-217ENST00000575483 ZNF622Q969S3 477 aaKnown RBP eCLIP18.56■□□□□ 0.561e-7■□□□□ 9.8
CDC27-217ENST00000575483 NUP98P52948 1817 aa18.56■□□□□ 0.56
CDC27-217ENST00000575483 SPDYE1Q8NFV5 336 aaPredicted RBP18.55■□□□□ 0.56
CDC27-217ENST00000575483 KLRG2A4D1S0 409 aaPredicted RBP18.54■□□□□ 0.56
CDC27-217ENST00000575483 VEGFAP15692 232 aaPredicted RBP18.54■□□□□ 0.56
CDC27-217ENST00000575483 PRPF40BQ6NWY9 871 aaKnown RBP18.54■□□□□ 0.56
CDC27-217ENST00000575483 JMYQ8N9B5 988 aa18.54■□□□□ 0.56
CDC27-217ENST00000575483 SMC1BQ8NDV3 1235 aa18.54■□□□□ 0.56
CDC27-217ENST00000575483 C7orf43Q8WVR3 580 aa18.54■□□□□ 0.56
CDC27-217ENST00000575483 PLEKHF1Q96S99 279 aa18.54■□□□□ 0.56
CDC27-217ENST00000575483 ST5P78524 1137 aa18.53■□□□□ 0.56
CDC27-217ENST00000575483 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
CDC27-217ENST00000575483 KLRG1Q96E93 195 aa18.53■□□□□ 0.56
CDC27-217ENST00000575483 CNKSR1Q969H4 720 aa18.52■□□□□ 0.56
CDC27-217ENST00000575483 MASTLQ96GX5 879 aa18.52■□□□□ 0.56
CDC27-217ENST00000575483 MIS18AQ9NYP9 233 aa18.52■□□□□ 0.56
CDC27-217ENST00000575483 NPM2Q86SE8 214 aaKnown RBP18.51■□□□□ 0.55
CDC27-217ENST00000575483 TAOK3Q9H2K8 898 aa18.51■□□□□ 0.55
CDC27-217ENST00000575483 SNED1Q8TER0 1413 aa18.5■□□□□ 0.55
CDC27-217ENST00000575483 HLFQ16534 295 aa18.5■□□□□ 0.55
CDC27-217ENST00000575483 ERFEQ4G0M1 354 aa18.5■□□□□ 0.55
CDC27-217ENST00000575483 NBPF5PQ86XG9 351 aaPredicted RBP18.5■□□□□ 0.55
CDC27-217ENST00000575483 ZNF652Q9Y2D9 606 aa18.5■□□□□ 0.55
CDC27-217ENST00000575483 NIP7Q9Y221 180 aaKnown RBP eCLIP18.49■□□□□ 0.55
CDC27-217ENST00000575483 SCN4AP35499 1836 aa18.48■□□□□ 0.55
CDC27-217ENST00000575483 ABCC12Q96J65 1359 aa18.47■□□□□ 0.55
CDC27-217ENST00000575483 PITPNM1O00562 1244 aa18.47■□□□□ 0.55
CDC27-217ENST00000575483 NPR1P16066 1061 aa18.47■□□□□ 0.55
CDC27-217ENST00000575483 EIF4A1P60842 406 aaKnown RBP18.47■□□□□ 0.55
CDC27-217ENST00000575483 NFE2L2Q16236 605 aa18.47■□□□□ 0.55
CDC27-217ENST00000575483 SOGA3Q5TF21 947 aa18.47■□□□□ 0.55
CDC27-217ENST00000575483 THUMPD2Q9BTF0 503 aaKnown RBP18.47■□□□□ 0.55
CDC27-217ENST00000575483 NPHP1O15259 732 aa18.46■□□□□ 0.55
CDC27-217ENST00000575483 TPTE2Q6XPS3 522 aa18.46■□□□□ 0.55
CDC27-217ENST00000575483 ADAMTSL1Q8N6G6 1762 aa18.45■□□□□ 0.54
CDC27-217ENST00000575483 DDNO94850 711 aaPredicted RBP18.45■□□□□ 0.54
CDC27-217ENST00000575483 CRY2Q49AN0 593 aa18.45■□□□□ 0.54
CDC27-217ENST00000575483 DPY19L2Q6NUT2 758 aa18.45■□□□□ 0.54
CDC27-217ENST00000575483 OLFM4Q6UX06 510 aa18.45■□□□□ 0.54
CDC27-217ENST00000575483 PNISRQ8TF01 805 aaKnown RBP18.45■□□□□ 0.54
CDC27-217ENST00000575483 RIC1Q4ADV7 1423 aa18.45■□□□□ 0.54
CDC27-217ENST00000575483 ERVV-1B6SEH8 477 aa18.44■□□□□ 0.54
CDC27-217ENST00000575483 CCDC93Q567U6 631 aa18.44■□□□□ 0.54
CDC27-217ENST00000575483 MAP3K15Q6ZN16 1313 aa18.44■□□□□ 0.54
CDC27-217ENST00000575483 IBTKQ9P2D0 1353 aaPredicted RBP18.43■□□□□ 0.54
CDC27-217ENST00000575483 POTEIP0CG38 1075 aa18.43■□□□□ 0.54
CDC27-217ENST00000575483 POTEJP0CG39 1038 aa18.43■□□□□ 0.54
CDC27-217ENST00000575483 TTLL7Q6ZT98 887 aa18.43■□□□□ 0.54
CDC27-217ENST00000575483 LRP10Q7Z4F1 713 aa18.43■□□□□ 0.54
CDC27-217ENST00000575483 L3MBTL3Q96JM7 780 aaPredicted RBP18.43■□□□□ 0.54
CDC27-217ENST00000575483 CLEC11AQ9Y240 323 aa18.43■□□□□ 0.54
CDC27-217ENST00000575483 UBN2Q6ZU65 1347 aa18.43■□□□□ 0.54
CDC27-217ENST00000575483 COL4A5P29400 1685 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms