RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 PDE6BP35913 854 aa14.73□□□□□ -0.05
ABR-220ENST00000573325 CNGB1Q14028 1251 aaPredicted RBP14.73□□□□□ -0.05
ABR-220ENST00000573325 STYK1Q6J9G0 422 aa14.73□□□□□ -0.05
ABR-220ENST00000573325 SNRPA1P09661 255 aaKnown RBP14.72□□□□□ -0.05
ABR-220ENST00000573325 HLFQ16534 295 aa14.72□□□□□ -0.05
ABR-220ENST00000573325 PRPF40BQ6NWY9 871 aaKnown RBP14.72□□□□□ -0.05
ABR-220ENST00000573325 LRP10Q7Z4F1 713 aa14.72□□□□□ -0.05
ABR-220ENST00000573325 SMC1BQ8NDV3 1235 aa14.72□□□□□ -0.05
ABR-220ENST00000573325 CCDC88AQ3V6T2 1871 aa14.72□□□□□ -0.05
ABR-220ENST00000573325 ARFGEF2Q9Y6D5 1785 aa14.71□□□□□ -0.05
ABR-220ENST00000573325 DICER1Q9UPY3 1922 aaKnown RBP14.71□□□□□ -0.05
ABR-220ENST00000573325 POTEIP0CG38 1075 aa14.71□□□□□ -0.05
ABR-220ENST00000573325 POTEJP0CG39 1038 aa14.71□□□□□ -0.05
ABR-220ENST00000573325 U2AF1L5P0DN76 240 aaPredicted RBP14.71□□□□□ -0.05
ABR-220ENST00000573325 U2AF1Q01081 240 aaKnown RBP eCLIP14.71□□□□□ -0.05
ABR-220ENST00000573325 CNBD1Q8NA66 436 aa14.71□□□□□ -0.05
ABR-220ENST00000573325 SETDB2Q96T68 719 aa14.71□□□□□ -0.05
ABR-220ENST00000573325 OLFM4Q6UX06 510 aa14.7□□□□□ -0.06
ABR-220ENST00000573325 ZNF622Q969S3 477 aaKnown RBP eCLIP14.7□□□□□ -0.06
ABR-220ENST00000573325 MIS18AQ9NYP9 233 aa14.7□□□□□ -0.06
ABR-220ENST00000573325 TAF7Q15545 349 aaPredicted RBP14.69□□□□□ -0.06
ABR-220ENST00000573325 CRY2Q49AN0 593 aa14.69□□□□□ -0.06
ABR-220ENST00000573325 COL13A1Q5TAT6 717 aaPredicted RBP14.69□□□□□ -0.06
ABR-220ENST00000573325 SLC51AQ86UW1 340 aa14.69□□□□□ -0.06
ABR-220ENST00000573325 MASTLQ96GX5 879 aa14.69□□□□□ -0.06
ABR-220ENST00000573325 CFAP53Q96M91 514 aa14.69□□□□□ -0.06
ABR-220ENST00000573325 COL4A5P29400 1685 aa14.68□□□□□ -0.06
ABR-220ENST00000573325 DDNO94850 711 aaPredicted RBP14.68□□□□□ -0.06
ABR-220ENST00000573325 EIF4A1P60842 406 aaKnown RBP14.68□□□□□ -0.06
ABR-220ENST00000573325 CNKSR1Q969H4 720 aa14.68□□□□□ -0.06
ABR-220ENST00000573325 L3MBTL3Q96JM7 780 aaPredicted RBP14.68□□□□□ -0.06
ABR-220ENST00000573325 NUDCQ9Y266 331 aa14.68□□□□□ -0.06
ABR-220ENST00000573325 ZNF330Q9Y3S2 320 aaPredicted RBP14.68□□□□□ -0.06
ABR-220ENST00000573325 ABCC12Q96J65 1359 aa14.68□□□□□ -0.06
ABR-220ENST00000573325 KDM3BQ7LBC6 1761 aa14.68□□□□□ -0.06
ABR-220ENST00000573325 ERFEQ4G0M1 354 aa14.67□□□□□ -0.06
ABR-220ENST00000573325 C16orf71Q8IYS4 520 aaPredicted RBP14.67□□□□□ -0.06
ABR-220ENST00000573325 TAOK3Q9H2K8 898 aa14.67□□□□□ -0.06
ABR-220ENST00000573325 ZNF219Q9P2Y4 722 aaPredicted RBP14.67□□□□□ -0.06
ABR-220ENST00000573325 THUMPD2Q9BTF0 503 aaKnown RBP14.66□□□□□ -0.06
ABR-220ENST00000573325 UBN2Q6ZU65 1347 aa14.66□□□□□ -0.06
ABR-220ENST00000573325 PASKQ96RG2 1323 aa14.66□□□□□ -0.06
ABR-220ENST00000573325 ADAMTSL1Q8N6G6 1762 aa14.65□□□□□ -0.06
ABR-220ENST00000573325 NPR1P16066 1061 aa14.65□□□□□ -0.06
ABR-220ENST00000573325 PDIA6Q15084 440 aa14.65□□□□□ -0.06
ABR-220ENST00000573325 TTLL7Q6ZT98 887 aa14.65□□□□□ -0.06
ABR-220ENST00000573325 NBPF5PQ86XG9 351 aaPredicted RBP14.65□□□□□ -0.06
ABR-220ENST00000573325 RIC1Q4ADV7 1423 aa14.65□□□□□ -0.06
ABR-220ENST00000573325 ZNF541Q9H0D2 1346 aa14.65□□□□□ -0.06
ABR-220ENST00000573325 ERVV-1B6SEH8 477 aa14.64□□□□□ -0.07
ABR-220ENST00000573325 ITGBL1O95965 494 aaPredicted RBP14.64□□□□□ -0.07
ABR-220ENST00000573325 NIP7Q9Y221 180 aaKnown RBP eCLIP14.64□□□□□ -0.07
ABR-220ENST00000573325 DLG5Q8TDM6 1919 aa14.64□□□□□ -0.07
ABR-220ENST00000573325 CACNA1SQ13698 1873 aa14.63□□□□□ -0.07
ABR-220ENST00000573325 LAMB4A4D0S4 1761 aa14.63□□□□□ -0.07
ABR-220ENST00000573325 FZD9O00144 591 aa14.63□□□□□ -0.07
ABR-220ENST00000573325 HOXA10P31260 410 aaPredicted RBP14.63□□□□□ -0.07
ABR-220ENST00000573325 ST5P78524 1137 aa14.63□□□□□ -0.07
ABR-220ENST00000573325 FKBP4Q02790 459 aaKnown RBP eCLIP14.63□□□□□ -0.07
ABR-220ENST00000573325 NFE2L2Q16236 605 aa14.63□□□□□ -0.07
ABR-220ENST00000573325 C3orf67Q6ZVT6 689 aa14.63□□□□□ -0.07
ABR-220ENST00000573325 RTF1Q92541 710 aaKnown RBP14.63□□□□□ -0.07
ABR-220ENST00000573325 TAF1DQ9H5J8 278 aaPredicted RBP14.63□□□□□ -0.07
ABR-220ENST00000573325 DPY19L2Q6NUT2 758 aa14.62□□□□□ -0.07
ABR-220ENST00000573325 TPTE2Q6XPS3 522 aa14.62□□□□□ -0.07
ABR-220ENST00000573325 ZNF34Q8IZ26 560 aa14.62□□□□□ -0.07
ABR-220ENST00000573325 MAP3K15Q6ZN16 1313 aa14.62□□□□□ -0.07
ABR-220ENST00000573325 IBTKQ9P2D0 1353 aaPredicted RBP14.61□□□□□ -0.07
ABR-220ENST00000573325 CCDC93Q567U6 631 aa14.61□□□□□ -0.07
ABR-220ENST00000573325 SOGA3Q5TF21 947 aa14.61□□□□□ -0.07
ABR-220ENST00000573325 CHADLQ6NUI6 762 aa14.61□□□□□ -0.07
ABR-220ENST00000573325 ZNF277Q9NRM2 450 aaPredicted RBP14.61□□□□□ -0.07
ABR-220ENST00000573325 ZNF652Q9Y2D9 606 aa14.61□□□□□ -0.07
ABR-220ENST00000573325 NTSR2O95665 410 aa14.6□□□□□ -0.07
ABR-220ENST00000573325 SUSD4Q5VX71 490 aa14.6□□□□□ -0.07
ABR-220ENST00000573325 NUTM1Q86Y26 1132 aa14.6□□□□□ -0.07
ABR-220ENST00000573325 PSMD1Q99460 953 aa14.6□□□□□ -0.07
ABR-220ENST00000573325 LTBP1Q14766 1721 aa14.59□□□□□ -0.07
ABR-220ENST00000573325 PROSER3Q2NL68 480 aa14.59□□□□□ -0.07
ABR-220ENST00000573325 PNISRQ8TF01 805 aaKnown RBP14.59□□□□□ -0.07
ABR-220ENST00000573325 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
ABR-220ENST00000573325 NUP98P52948 1817 aa14.59□□□□□ -0.07
ABR-220ENST00000573325 HSPA1AP0DMV8 641 aaKnown RBP14.58□□□□□ -0.08
ABR-220ENST00000573325 HSPA1BP0DMV9 641 aaKnown RBP14.58□□□□□ -0.08
ABR-220ENST00000573325 SCN4AP35499 1836 aa14.57□□□□□ -0.08
ABR-220ENST00000573325 FAM177BA6PVY3 158 aa14.57□□□□□ -0.08
ABR-220ENST00000573325 SLC10A5Q5PT55 438 aa14.57□□□□□ -0.08
ABR-220ENST00000573325 GIGYF2Q6Y7W6 1299 aaKnown RBP14.57□□□□□ -0.08
ABR-220ENST00000573325 LDHDQ86WU2 507 aa14.57□□□□□ -0.08
ABR-220ENST00000573325 RTKN2Q8IZC4 609 aa14.57□□□□□ -0.08
ABR-220ENST00000573325 SYNE4Q8N205 404 aa14.57□□□□□ -0.08
ABR-220ENST00000573325 ERBB4Q15303 1308 aa14.57□□□□□ -0.08
ABR-220ENST00000573325 CNTNAP1P78357 1384 aa14.57□□□□□ -0.08
ABR-220ENST00000573325 IARSP41252 1262 aaKnown RBP14.56□□□□□ -0.08
ABR-220ENST00000573325 RRP7AQ9Y3A4 280 aaKnown RBP14.56□□□□□ -0.08
ABR-220ENST00000573325 ALDH1B1P30837 517 aa14.55□□□□□ -0.08
ABR-220ENST00000573325 CRAMP1Q96RY5 1269 aa14.55□□□□□ -0.08
ABR-220ENST00000573325 ZBTB3Q9H5J0 574 aa14.55□□□□□ -0.08
ABR-220ENST00000573325 IQCA1LA6NCM1 817 aa14.54□□□□□ -0.08
ABR-220ENST00000573325 GPTP24298 496 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms