RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 COPS6Q7L5N1 327 aa12.78□□□□□ -0.36
GTF3C1-212ENST00000570129 SLC51AQ86UW1 340 aa12.78□□□□□ -0.36
GTF3C1-212ENST00000570129 SYNE4Q8N205 404 aa12.78□□□□□ -0.36
GTF3C1-212ENST00000570129 CDCA7LQ96GN5 454 aa12.78□□□□□ -0.36
GTF3C1-212ENST00000570129 PHAXQ9H814 394 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-212ENST00000570129 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
GTF3C1-212ENST00000570129 GOLGB1Q14789 3259 aaKnown RBP12.77□□□□□ -0.36
GTF3C1-212ENST00000570129 CCER2I3L3R5 266 aa12.77□□□□□ -0.37
GTF3C1-212ENST00000570129 HMGB2P26583 209 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-212ENST00000570129 HDGFL1Q5TGJ6 251 aa12.77□□□□□ -0.37
GTF3C1-212ENST00000570129 G2E3Q7L622 706 aa12.77□□□□□ -0.37
GTF3C1-212ENST00000570129 EXOSC9Q06265 439 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-212ENST00000570129 GPR162Q16538 588 aa12.76□□□□□ -0.37
GTF3C1-212ENST00000570129 PRR5LQ6MZQ0 368 aa12.76□□□□□ -0.37
GTF3C1-212ENST00000570129 ZNF521Q96K83 1311 aa12.76□□□□□ -0.37
GTF3C1-212ENST00000570129 FANCIQ9NVI1 1328 aa12.76□□□□□ -0.37
GTF3C1-212ENST00000570129 PXDNLA1KZ92 1463 aa12.75□□□□□ -0.37
GTF3C1-212ENST00000570129 UTRNP46939 3433 aa12.75□□□□□ -0.37
GTF3C1-212ENST00000570129 MAP3K15Q6ZN16 1313 aa12.75□□□□□ -0.37
GTF3C1-212ENST00000570129 UBN2Q6ZU65 1347 aa12.75□□□□□ -0.37
GTF3C1-212ENST00000570129 C10orf71Q711Q0 1435 aa12.75□□□□□ -0.37
GTF3C1-212ENST00000570129 DDX21Q9NR30 783 aaKnown RBP eCLIP12.75□□□□□ -0.37
GTF3C1-212ENST00000570129 NIP7Q9Y221 180 aaKnown RBP eCLIP12.75□□□□□ -0.37
GTF3C1-212ENST00000570129 SUSD4Q5VX71 490 aa12.74□□□□□ -0.37
GTF3C1-212ENST00000570129 C3orf67Q6ZVT6 689 aa12.74□□□□□ -0.37
GTF3C1-212ENST00000570129 NUTM1Q86Y26 1132 aa12.74□□□□□ -0.37
GTF3C1-212ENST00000570129 WDR63Q8IWG1 891 aa12.74□□□□□ -0.37
GTF3C1-212ENST00000570129 JARID2Q92833 1246 aaPredicted RBP12.74□□□□□ -0.37
GTF3C1-212ENST00000570129 SETDB2Q96T68 719 aa12.74□□□□□ -0.37
GTF3C1-212ENST00000570129 IL16Q14005 1332 aa12.72□□□□□ -0.37
GTF3C1-212ENST00000570129 ATP5J2-PTCD1G3V325 749 aa12.72□□□□□ -0.37
GTF3C1-212ENST00000570129 VAMP4O75379 141 aa12.72□□□□□ -0.37
GTF3C1-212ENST00000570129 CALD1Q05682 793 aaKnown RBP12.72□□□□□ -0.37
GTF3C1-212ENST00000570129 ERFEQ4G0M1 354 aa12.72□□□□□ -0.37
GTF3C1-212ENST00000570129 NPM2Q86SE8 214 aaKnown RBP12.72□□□□□ -0.37
GTF3C1-212ENST00000570129 ZNF34Q8IZ26 560 aa12.72□□□□□ -0.37
GTF3C1-212ENST00000570129 ZNF219Q9P2Y4 722 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-212ENST00000570129 ERVV-1B6SEH8 477 aa12.71□□□□□ -0.37
GTF3C1-212ENST00000570129 TWISTNBQ3B726 338 aaPredicted RBP12.71□□□□□ -0.37
GTF3C1-212ENST00000570129 OLFM4Q6UX06 510 aa12.71□□□□□ -0.37
GTF3C1-212ENST00000570129 CLEC4GQ6UXB4 293 aa12.71□□□□□ -0.37
GTF3C1-212ENST00000570129 KIF6Q6ZMV9 814 aa12.71□□□□□ -0.37
GTF3C1-212ENST00000570129 NBPF5PQ86XG9 351 aaPredicted RBP12.71□□□□□ -0.37
GTF3C1-212ENST00000570129 C2CD5Q86YS7 1000 aa12.71□□□□□ -0.37
GTF3C1-212ENST00000570129 BCS1LQ9Y276 419 aa12.71□□□□□ -0.37
GTF3C1-212ENST00000570129 N4BP2Q86UW6 1770 aaPredicted RBP12.71□□□□□ -0.38
GTF3C1-212ENST00000570129 KIAA1551Q9HCM1 1747 aa12.71□□□□□ -0.38
GTF3C1-212ENST00000570129 ERBB4Q15303 1308 aa12.7□□□□□ -0.38
GTF3C1-212ENST00000570129 TGFB2P61812 414 aa12.7□□□□□ -0.38
GTF3C1-212ENST00000570129 NCBP3Q53F19 620 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-212ENST00000570129 GIGYF2Q6Y7W6 1299 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-212ENST00000570129 PIAS4Q8N2W9 510 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-212ENST00000570129 ABCC12Q96J65 1359 aa12.69□□□□□ -0.38
GTF3C1-212ENST00000570129 AFDNP55196 1824 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-212ENST00000570129 LAMB4A4D0S4 1761 aa12.69□□□□□ -0.38
GTF3C1-212ENST00000570129 HOXB7P09629 217 aa12.69□□□□□ -0.38
GTF3C1-212ENST00000570129 PRELPP51888 382 aa12.69□□□□□ -0.38
GTF3C1-212ENST00000570129 SLFN5Q08AF3 891 aa12.69□□□□□ -0.38
GTF3C1-212ENST00000570129 RTL5Q5HYW3 569 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-212ENST00000570129 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
GTF3C1-212ENST00000570129 CNBD1Q8NA66 436 aa12.69□□□□□ -0.38
GTF3C1-212ENST00000570129 DBF4Q9UBU7 674 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-212ENST00000570129 SCN7AQ01118 1682 aa12.68□□□□□ -0.38
GTF3C1-212ENST00000570129 NTSR2O95665 410 aa12.68□□□□□ -0.38
GTF3C1-212ENST00000570129 SLC4A2P04920 1241 aa12.68□□□□□ -0.38
GTF3C1-212ENST00000570129 HCLS1P14317 486 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-212ENST00000570129 GOLGA2Q08379 1002 aa12.68□□□□□ -0.38
GTF3C1-212ENST00000570129 TCIRG1Q13488 830 aa12.68□□□□□ -0.38
GTF3C1-212ENST00000570129 NLRP10Q86W26 655 aa12.68□□□□□ -0.38
GTF3C1-212ENST00000570129 ZNF622Q969S3 477 aaKnown RBP eCLIP12.68□□□□□ -0.382e-7■■■■□ 24.1
GTF3C1-212ENST00000570129 BRIP1Q9BX63 1249 aa12.68□□□□□ -0.38
GTF3C1-212ENST00000570129 HYPKQ9NX55 129 aa12.68□□□□□ -0.38
GTF3C1-212ENST00000570129 CCDC30Q5VVM6 783 aa12.67□□□□□ -0.38
GTF3C1-212ENST00000570129 PLBD2Q8NHP8 589 aa12.67□□□□□ -0.38
GTF3C1-212ENST00000570129 PIM2Q9P1W9 311 aa12.67□□□□□ -0.38
GTF3C1-212ENST00000570129 ZNF652Q9Y2D9 606 aa12.67□□□□□ -0.38
GTF3C1-212ENST00000570129 BCORQ6W2J9 1755 aa12.66□□□□□ -0.38
GTF3C1-212ENST00000570129 NRXN2Q9P2S2 1712 aa12.66□□□□□ -0.38
GTF3C1-212ENST00000570129 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
GTF3C1-212ENST00000570129 TRMT2AQ8IZ69 625 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-212ENST00000570129 MYD88Q99836 296 aa12.66□□□□□ -0.38
GTF3C1-212ENST00000570129 ISCA1Q9BUE6 129 aa12.66□□□□□ -0.38
GTF3C1-212ENST00000570129 PI4KAP2A4QPH2 592 aa12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 F6X3S4 739 aa12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 H0YIN7 160 aa12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 NPHP1O15259 732 aa12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 IGKV5-2P06315 115 aa12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 SRGNP10124 158 aa12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 DALRD3Q5D0E6 543 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 TPTE2Q6XPS3 522 aa12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 RIC3Q7Z5B4 369 aa12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 PI4KAP1Q8N8J0 262 aa12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 FAM89AQ96GI7 184 aa12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 MAP3K2Q9Y2U5 619 aa12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 ADCY9O60503 1353 aa12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 ANKRD31Q8N7Z5 1873 aa12.65□□□□□ -0.38
GTF3C1-212ENST00000570129 KIF13BQ9NQT8 1826 aa12.65□□□□□ -0.39
GTF3C1-212ENST00000570129 ATP10DQ9P241 1426 aa12.64□□□□□ -0.39
GTF3C1-212ENST00000570129 C21orf2O43822 256 aa12.64□□□□□ -0.39
GTF3C1-212ENST00000570129 YY1P25490 414 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms