RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-215ENST00000568903 PIP4P2Q8N4L2 257 aa13.2□□□□□ -0.3
TNRC6A-215ENST00000568903 PRAMEF22A3QJZ6 481 aa13.19□□□□□ -0.3
TNRC6A-215ENST00000568903 GNAT3A8MTJ3 354 aa13.19□□□□□ -0.3
TNRC6A-215ENST00000568903 A1BGP04217 495 aa13.19□□□□□ -0.3
TNRC6A-215ENST00000568903 SERPINB2P05120 415 aa13.19□□□□□ -0.3
TNRC6A-215ENST00000568903 PIP4K2AP48426 406 aaPredicted RBP13.19□□□□□ -0.3
TNRC6A-215ENST00000568903 EIF5P55010 431 aaKnown RBP13.19□□□□□ -0.3
TNRC6A-215ENST00000568903 RASSF7Q02833 373 aa13.19□□□□□ -0.3
TNRC6A-215ENST00000568903 TBC1D2BQ9UPU7 963 aa13.19□□□□□ -0.3
TNRC6A-215ENST00000568903 AFDNP55196 1824 aaKnown RBP13.18□□□□□ -0.3
TNRC6A-215ENST00000568903 UBR2Q8IWV8 1755 aa13.18□□□□□ -0.3
TNRC6A-215ENST00000568903 PRKAR2BP31323 418 aa13.18□□□□□ -0.3
TNRC6A-215ENST00000568903 TBC1D9BQ66K14 1250 aa13.18□□□□□ -0.3
TNRC6A-215ENST00000568903 ZNF790Q6PG37 636 aa13.18□□□□□ -0.3
TNRC6A-215ENST00000568903 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
TNRC6A-215ENST00000568903 RSPH6AQ9H0K4 717 aa13.18□□□□□ -0.3
TNRC6A-215ENST00000568903 RNF181Q9P0P0 153 aa13.18□□□□□ -0.3
TNRC6A-215ENST00000568903 ZNF330Q9Y3S2 320 aaPredicted RBP13.18□□□□□ -0.3
TNRC6A-215ENST00000568903 NPC1L1Q9UHC9 1359 aa13.18□□□□□ -0.3
TNRC6A-215ENST00000568903 HTRA3P83110 453 aa13.17□□□□□ -0.3
TNRC6A-215ENST00000568903 TEFQ10587 303 aa13.17□□□□□ -0.3
TNRC6A-215ENST00000568903 TTC5Q8N0Z6 440 aa13.17□□□□□ -0.3
TNRC6A-215ENST00000568903 HEG1Q9ULI3 1381 aa13.17□□□□□ -0.3
TNRC6A-215ENST00000568903 ARFGEF1Q9Y6D6 1849 aa13.16□□□□□ -0.3
TNRC6A-215ENST00000568903 PPP2R1AP30153 589 aa13.16□□□□□ -0.3
TNRC6A-215ENST00000568903 DCTN1Q14203 1278 aa13.16□□□□□ -0.3
TNRC6A-215ENST00000568903 MCM10Q7L590 875 aa13.16□□□□□ -0.3
TNRC6A-215ENST00000568903 C2CD5Q86YS7 1000 aa13.16□□□□□ -0.3
TNRC6A-215ENST00000568903 GAS2L2Q8NHY3 880 aa13.16□□□□□ -0.3
TNRC6A-215ENST00000568903 RRAGCQ9HB90 399 aa13.16□□□□□ -0.3
TNRC6A-215ENST00000568903 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
TNRC6A-215ENST00000568903 TOMM70O94826 608 aa13.15□□□□□ -0.3
TNRC6A-215ENST00000568903 STARD3NLO95772 234 aa13.15□□□□□ -0.3
TNRC6A-215ENST00000568903 NRXN2Q9P2S2 1712 aa13.15□□□□□ -0.3
TNRC6A-215ENST00000568903 SIPA1L3O60292 1781 aaPredicted RBP13.15□□□□□ -0.31
TNRC6A-215ENST00000568903 BTBD11A6QL63 1104 aa13.14□□□□□ -0.31
TNRC6A-215ENST00000568903 DNAJC5GQ8N7S2 189 aa13.14□□□□□ -0.31
TNRC6A-215ENST00000568903 CEMIPQ8WUJ3 1361 aa13.14□□□□□ -0.31
TNRC6A-215ENST00000568903 U2AF1L5P0DN76 240 aaPredicted RBP13.13□□□□□ -0.31
TNRC6A-215ENST00000568903 U2AF1Q01081 240 aaKnown RBP eCLIP13.13□□□□□ -0.313e-7■□□□□ 8.7
TNRC6A-215ENST00000568903 FMNL2Q96PY5 1086 aa13.13□□□□□ -0.31
TNRC6A-215ENST00000568903 MIS18AQ9NYP9 233 aa13.13□□□□□ -0.31
TNRC6A-215ENST00000568903 PCDHB8Q9UN66 801 aa13.13□□□□□ -0.31
TNRC6A-215ENST00000568903 PCDHB13Q9Y5F0 798 aa13.13□□□□□ -0.31
TNRC6A-215ENST00000568903 SBF1O95248 1867 aa13.12□□□□□ -0.31
TNRC6A-215ENST00000568903 NFKBIEO00221 500 aa13.12□□□□□ -0.31
TNRC6A-215ENST00000568903 CAMTA2O94983 1202 aa13.12□□□□□ -0.31
TNRC6A-215ENST00000568903 PRR5LQ6MZQ0 368 aa13.12□□□□□ -0.31
TNRC6A-215ENST00000568903 TTLL6Q8N841 843 aa13.12□□□□□ -0.31
TNRC6A-215ENST00000568903 ANKRD31Q8N7Z5 1873 aa13.11□□□□□ -0.31
TNRC6A-215ENST00000568903 H0YIN7 160 aa13.11□□□□□ -0.31
TNRC6A-215ENST00000568903 IL6STP40189 918 aaPredicted RBP13.11□□□□□ -0.31
TNRC6A-215ENST00000568903 ZNF622Q969S3 477 aaKnown RBP eCLIP13.11□□□□□ -0.314e-7■■□□□ 12.7
TNRC6A-215ENST00000568903 A0A087WZG4 1122 aa13.1□□□□□ -0.31
TNRC6A-215ENST00000568903 NBPF26B4DH59 902 aa13.1□□□□□ -0.31
TNRC6A-215ENST00000568903 C21orf2O43822 256 aa13.1□□□□□ -0.31
TNRC6A-215ENST00000568903 PSEN1P49768 467 aa13.1□□□□□ -0.31
TNRC6A-215ENST00000568903 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
TNRC6A-215ENST00000568903 NBPF15Q8N660 670 aa13.1□□□□□ -0.31
TNRC6A-215ENST00000568903 CFAP53Q96M91 514 aa13.1□□□□□ -0.31
TNRC6A-215ENST00000568903 TEX13AQ9BXU3 409 aaPredicted RBP13.1□□□□□ -0.31
TNRC6A-215ENST00000568903 APLP1P51693 650 aa13.09□□□□□ -0.31
TNRC6A-215ENST00000568903 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
TNRC6A-215ENST00000568903 RBM46Q8TBY0 533 aaKnown RBP13.09□□□□□ -0.31
TNRC6A-215ENST00000568903 PCNTO95613 3336 aa13.08□□□□□ -0.31
TNRC6A-215ENST00000568903 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
TNRC6A-215ENST00000568903 DLEC1Q9Y238 1755 aa13.08□□□□□ -0.32
TNRC6A-215ENST00000568903 POTECB2RU33 542 aa13.08□□□□□ -0.32
TNRC6A-215ENST00000568903 LMNB1P20700 586 aa13.08□□□□□ -0.32
TNRC6A-215ENST00000568903 IFFO2Q5TF58 517 aa13.08□□□□□ -0.32
TNRC6A-215ENST00000568903 SETDB2Q96T68 719 aa13.08□□□□□ -0.32
TNRC6A-215ENST00000568903 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.32
TNRC6A-215ENST00000568903 BRIP1Q9BX63 1249 aa13.08□□□□□ -0.32
TNRC6A-215ENST00000568903 NUDCQ9Y266 331 aa13.08□□□□□ -0.32
TNRC6A-215ENST00000568903 SCN7AQ01118 1682 aa13.08□□□□□ -0.32
TNRC6A-215ENST00000568903 KDM2BQ8NHM5 1336 aa13.08□□□□□ -0.32
TNRC6A-215ENST00000568903 C16orf71Q8IYS4 520 aaPredicted RBP13.07□□□□□ -0.32
TNRC6A-215ENST00000568903 KIF12Q96FN5 646 aa13.07□□□□□ -0.32
TNRC6A-215ENST00000568903 GLTPD2A6NH11 291 aa13.06□□□□□ -0.32
TNRC6A-215ENST00000568903 FAM177BA6PVY3 158 aa13.06□□□□□ -0.32
TNRC6A-215ENST00000568903 SNRPA1P09661 255 aaKnown RBP13.06□□□□□ -0.32
TNRC6A-215ENST00000568903 PDE6BP35913 854 aa13.06□□□□□ -0.32
TNRC6A-215ENST00000568903 HLFQ16534 295 aa13.06□□□□□ -0.32
TNRC6A-215ENST00000568903 OLFM4Q6UX06 510 aa13.06□□□□□ -0.32
TNRC6A-215ENST00000568903 CNBD1Q8NA66 436 aa13.06□□□□□ -0.32
TNRC6A-215ENST00000568903 RTF1Q92541 710 aaKnown RBP13.06□□□□□ -0.32
TNRC6A-215ENST00000568903 SRGNP10124 158 aa13.05□□□□□ -0.32
TNRC6A-215ENST00000568903 NGEFQ8N5V2 710 aa13.05□□□□□ -0.32
TNRC6A-215ENST00000568903 CCDC88AQ3V6T2 1871 aa13.05□□□□□ -0.32
TNRC6A-215ENST00000568903 SLX4Q8IY92 1834 aa13.04□□□□□ -0.32
TNRC6A-215ENST00000568903 MAP3K13O43283 966 aa13.04□□□□□ -0.32
TNRC6A-215ENST00000568903 TAF7Q15545 349 aaPredicted RBP13.04□□□□□ -0.32
TNRC6A-215ENST00000568903 PRPF40BQ6NWY9 871 aaKnown RBP13.04□□□□□ -0.32
TNRC6A-215ENST00000568903 SLC51AQ86UW1 340 aa13.04□□□□□ -0.32
TNRC6A-215ENST00000568903 IFNL1Q8IU54 200 aa13.04□□□□□ -0.32
TNRC6A-215ENST00000568903 PLEKHF1Q96S99 279 aa13.04□□□□□ -0.32
TNRC6A-215ENST00000568903 WDR90Q96KV7 1748 aa13.03□□□□□ -0.32
TNRC6A-215ENST00000568903 BCORQ6W2J9 1755 aa13.03□□□□□ -0.32
TNRC6A-215ENST00000568903 NPHP1O15259 732 aa13.03□□□□□ -0.32
TNRC6A-215ENST00000568903 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms