RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 GTF2IP78347 998 aa5.76□□□□□ -1.49
SMG1-212ENST00000566328 LRRC69Q6ZNQ3 347 aa5.76□□□□□ -1.49
SMG1-212ENST00000566328 CHMP3Q9Y3E7 222 aa5.76□□□□□ -1.49
SMG1-212ENST00000566328 USP3Q9Y6I4 520 aa5.76□□□□□ -1.49
SMG1-212ENST00000566328 EML1O00423 815 aa5.75□□□□□ -1.49
SMG1-212ENST00000566328 TRIM28Q13263 835 aaKnown RBP5.75□□□□□ -1.49
SMG1-212ENST00000566328 ZMYM1Q5SVZ6 1142 aa5.75□□□□□ -1.49
SMG1-212ENST00000566328 TRIM50Q86XT4 487 aa5.75□□□□□ -1.49
SMG1-212ENST00000566328 TNFRSF25Q93038 417 aa5.75□□□□□ -1.49
SMG1-212ENST00000566328 PRDM6Q9NQX0 595 aa5.75□□□□□ -1.49
SMG1-212ENST00000566328 ZNF358Q9NW07 568 aa5.75□□□□□ -1.49
SMG1-212ENST00000566328 ANKIB1Q9P2G1 1089 aa5.75□□□□□ -1.49
SMG1-212ENST00000566328 SERTM1A2A2V5 107 aa5.74□□□□□ -1.49
SMG1-212ENST00000566328 M0R082 166 aa5.74□□□□□ -1.49
SMG1-212ENST00000566328 PIK3CDO00329 1044 aa5.74□□□□□ -1.49
SMG1-212ENST00000566328 SLC9A9Q8IVB4 645 aa5.74□□□□□ -1.49
SMG1-212ENST00000566328 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.74□□□□□ -1.49
SMG1-212ENST00000566328 ZNF417Q8TAU3 575 aa5.74□□□□□ -1.49
SMG1-212ENST00000566328 ZDHHC1Q8WTX9 485 aa5.74□□□□□ -1.49
SMG1-212ENST00000566328 ZNF587Q96SQ5 575 aaPredicted RBP5.74□□□□□ -1.49
SMG1-212ENST00000566328 NCOA4Q13772 614 aa5.73□□□□□ -1.49
SMG1-212ENST00000566328 MCM6Q14566 821 aa5.73□□□□□ -1.49
SMG1-212ENST00000566328 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
SMG1-212ENST00000566328 C1orf53Q5VUE5 145 aa5.73□□□□□ -1.49
SMG1-212ENST00000566328 RHPN1Q8TCX5 695 aa5.73□□□□□ -1.49
SMG1-212ENST00000566328 MDFIQ99750 246 aa5.73□□□□□ -1.49
SMG1-212ENST00000566328 KRTAP4-12Q9BQ66 201 aa5.73□□□□□ -1.49
SMG1-212ENST00000566328 ALG2Q9H553 416 aa5.73□□□□□ -1.49
SMG1-212ENST00000566328 USP17L5A8MUK1 530 aa5.72□□□□□ -1.49
SMG1-212ENST00000566328 ATP1A2P50993 1020 aa5.72□□□□□ -1.49
SMG1-212ENST00000566328 EPHA4P54764 986 aa5.72□□□□□ -1.49
SMG1-212ENST00000566328 SPEM2Q0P670 501 aa5.72□□□□□ -1.49
SMG1-212ENST00000566328 TNS4Q8IZW8 715 aa5.72□□□□□ -1.49
SMG1-212ENST00000566328 MICALL1Q8N3F8 863 aa5.72□□□□□ -1.49
SMG1-212ENST00000566328 SCO2A0A1W2PP80 73 aa5.71□□□□□ -1.5
SMG1-212ENST00000566328 ADH7P40394 386 aa5.71□□□□□ -1.5
SMG1-212ENST00000566328 PSMA6P60900 246 aaKnown RBP5.71□□□□□ -1.5
SMG1-212ENST00000566328 SFSWAPQ12872 951 aaKnown RBP5.71□□□□□ -1.5
SMG1-212ENST00000566328 RSPO4Q2I0M5 234 aaPredicted RBP5.71□□□□□ -1.5
SMG1-212ENST00000566328 NKAPLQ5M9Q1 402 aa5.71□□□□□ -1.5
SMG1-212ENST00000566328 C7orf43Q8WVR3 580 aa5.71□□□□□ -1.5
SMG1-212ENST00000566328 CEP63Q96MT8 703 aa5.71□□□□□ -1.5
SMG1-212ENST00000566328 SLC30A3Q99726 388 aa5.71□□□□□ -1.5
SMG1-212ENST00000566328 BRD7Q9NPI1 651 aa5.71□□□□□ -1.5
SMG1-212ENST00000566328 COG6Q9Y2V7 657 aa5.71□□□□□ -1.5
SMG1-212ENST00000566328 RBM19Q9Y4C8 960 aaKnown RBP5.71□□□□□ -1.5
SMG1-212ENST00000566328 C9orf172C9J069 976 aa5.7□□□□□ -1.5
SMG1-212ENST00000566328 RAD21O60216 631 aa5.7□□□□□ -1.5
SMG1-212ENST00000566328 LILRB5O75023 590 aa5.7□□□□□ -1.5
SMG1-212ENST00000566328 HIRAP54198 1017 aaPredicted RBP5.7□□□□□ -1.5
SMG1-212ENST00000566328 KCNQ4P56696 695 aa5.7□□□□□ -1.5
SMG1-212ENST00000566328 HIF1AQ16665 826 aa5.7□□□□□ -1.5
SMG1-212ENST00000566328 TPRNQ4KMQ1 711 aa5.7□□□□□ -1.5
SMG1-212ENST00000566328 TBCELQ5QJ74 424 aa5.7□□□□□ -1.5
SMG1-212ENST00000566328 CCDC102BQ68D86 513 aa5.7□□□□□ -1.5
SMG1-212ENST00000566328 EFCC1Q9HA90 598 aa5.7□□□□□ -1.5
SMG1-212ENST00000566328 TPSG1Q9NRR2 321 aa5.7□□□□□ -1.5
SMG1-212ENST00000566328 KCNH4Q9UQ05 1017 aa5.7□□□□□ -1.5
SMG1-212ENST00000566328 M0R2N6 131 aa5.69□□□□□ -1.5
SMG1-212ENST00000566328 ALBP02768 609 aa5.69□□□□□ -1.5
SMG1-212ENST00000566328 TRAPPC3LQ5T215 181 aa5.69□□□□□ -1.5
SMG1-212ENST00000566328 DEPDC4Q8N2C3 294 aa5.69□□□□□ -1.5
SMG1-212ENST00000566328 TPCN2Q8NHX9 752 aa5.69□□□□□ -1.5
SMG1-212ENST00000566328 STARD13Q9Y3M8 1113 aa5.69□□□□□ -1.5
SMG1-212ENST00000566328 SFI1A8K8P3 1242 aa5.68□□□□□ -1.5
SMG1-212ENST00000566328 DYRK3O43781 588 aa5.68□□□□□ -1.5
SMG1-212ENST00000566328 NID1P14543 1247 aa5.68□□□□□ -1.5
SMG1-212ENST00000566328 NRG1Q02297 640 aaPredicted RBP5.68□□□□□ -1.5
SMG1-212ENST00000566328 COL9A3Q14050 684 aaPredicted RBP5.68□□□□□ -1.5
SMG1-212ENST00000566328 PLEKHM2Q8IWE5 1019 aa5.68□□□□□ -1.5
SMG1-212ENST00000566328 PALM3A6NDB9 673 aaPredicted RBP5.67□□□□□ -1.5
SMG1-212ENST00000566328 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
SMG1-212ENST00000566328 ELNP15502 786 aa5.67□□□□□ -1.5
SMG1-212ENST00000566328 RAC1P63000 192 aa5.67□□□□□ -1.5
SMG1-212ENST00000566328 GRIK4Q16099 956 aa5.67□□□□□ -1.5
SMG1-212ENST00000566328 FOXD4L6Q3SYB3 417 aaPredicted RBP5.67□□□□□ -1.5
SMG1-212ENST00000566328 FOXD4L3Q6VB84 417 aaPredicted RBP5.67□□□□□ -1.5
SMG1-212ENST00000566328 LARGE2Q8N3Y3 721 aa5.67□□□□□ -1.5
SMG1-212ENST00000566328 PHACTR1Q9C0D0 580 aa5.67□□□□□ -1.5
SMG1-212ENST00000566328 TSPAN10Q9H1Z9 355 aaPredicted RBP5.67□□□□□ -1.5
SMG1-212ENST00000566328 HCN4Q9Y3Q4 1203 aa5.67□□□□□ -1.5
SMG1-212ENST00000566328 USP17L3A6NCW0 530 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 USP17L4A6NCW7 530 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 ZBTB7BO15156 539 aaPredicted RBP5.66□□□□□ -1.5
SMG1-212ENST00000566328 H2AFB1P0C5Y9 115 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 H2AFB2P0C5Z0 115 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 TYRO3Q06418 890 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 ARTNQ5T4W7 220 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 SH3PXD2AQ5TCZ1 1133 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 USP17L2Q6R6M4 530 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 POTEAQ6S8J7 498 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 C20orf204Q6ZNR8 217 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 C8orf86Q6ZUL3 223 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 USP17L1Q7RTZ2 530 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 RAB44Q7Z6P3 723 aaPredicted RBP5.66□□□□□ -1.5
SMG1-212ENST00000566328 BHMTQ93088 406 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 HSH2DQ96JZ2 352 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 SUSD3Q96L08 255 aa5.66□□□□□ -1.5
SMG1-212ENST00000566328 UBE2OQ9C0C9 1292 aaKnown RBP5.66□□□□□ -1.5
SMG1-212ENST00000566328 ZFP64Q9NPA5 681 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms