RNA–Protein interactions for RNA: ENST00000565677.5

STUB1-205, Transcript of STIP1 homology and U-box containing protein 1, human

TSL 1 (best) BASIC

Gene STUB1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STUB1-205	ENST00000565677	NUP188	Q5SRE5	1749 aa		33.32	■■■□□ 2.92
STUB1-205	ENST00000565677	PLBD2	Q8NHP8	589 aa		33.31	■■■□□ 2.92
STUB1-205	ENST00000565677	ZBTB3	Q9H5J0	574 aa		33.3	■■■□□ 2.92
STUB1-205	ENST00000565677	CCT4	P50991	539 aa	Known RBP	33.29	■■■□□ 2.92
STUB1-205	ENST00000565677	COL15A1	P39059	1388 aa		33.28	■■■□□ 2.92
STUB1-205	ENST00000565677	GNPAT	O15228	680 aa		33.28	■■■□□ 2.92
STUB1-205	ENST00000565677	KIF6	Q6ZMV9	814 aa		33.28	■■■□□ 2.92
STUB1-205	ENST00000565677	NPM2	Q86SE8	214 aa	Known RBP	33.28	■■■□□ 2.92
STUB1-205	ENST00000565677	ARX	Q96QS3	562 aa		33.28	■■■□□ 2.92
STUB1-205	ENST00000565677	DDX19B	Q9UMR2	479 aa		33.28	■■■□□ 2.92
STUB1-205	ENST00000565677	ATP10D	Q9P241	1426 aa		33.27	■■■□□ 2.92
STUB1-205	ENST00000565677	EN1	Q05925	392 aa	Predicted RBP	33.27	■■■□□ 2.92
STUB1-205	ENST00000565677	SF3B2	Q13435	895 aa	Known RBP	33.27	■■■□□ 2.92
STUB1-205	ENST00000565677	BEND3	Q5T5X7	828 aa		33.27	■■■□□ 2.92
STUB1-205	ENST00000565677	SMIM5	Q71RC9	77 aa		33.27	■■■□□ 2.92
STUB1-205	ENST00000565677	RPS6KA4	O75676	772 aa		33.26	■■■□□ 2.92
STUB1-205	ENST00000565677	ERICH6B	Q5W0A0	696 aa		33.26	■■■□□ 2.92
STUB1-205	ENST00000565677	DZIP3	Q86Y13	1208 aa	Known RBP	33.26	■■■□□ 2.92
STUB1-205	ENST00000565677	CAMKK2	Q96RR4	588 aa		33.26	■■■□□ 2.92
STUB1-205	ENST00000565677	METTL22	Q9BUU2	404 aa	Predicted RBP	33.26	■■■□□ 2.92
STUB1-205	ENST00000565677	TBC1D2B	Q9UPU7	963 aa		33.26	■■■□□ 2.92
STUB1-205	ENST00000565677	AMIGO3	Q86WK7	504 aa		33.26	■■■□□ 2.91
STUB1-205	ENST00000565677	AK7	Q96M32	723 aa		33.26	■■■□□ 2.91
STUB1-205	ENST00000565677	MAP3K15	Q6ZN16	1313 aa		33.25	■■■□□ 2.91
STUB1-205	ENST00000565677	EZH2	Q15910	746 aa	Known RBP	33.25	■■■□□ 2.91
STUB1-205	ENST00000565677	MYD88	Q99836	296 aa		33.24	■■■□□ 2.91
STUB1-205	ENST00000565677	SRCIN1	Q9C0H9	1055 aa		33.24	■■■□□ 2.91
STUB1-205	ENST00000565677	RTCB	Q9Y3I0	505 aa	Known RBP	33.23	■■■□□ 2.91
STUB1-205	ENST00000565677	ZBTB7B	O15156	539 aa	Predicted RBP	33.22	■■■□□ 2.91
STUB1-205	ENST00000565677	BAG6	P46379	1132 aa		33.22	■■■□□ 2.91
STUB1-205	ENST00000565677	DEFB132	Q7Z7B7	95 aa		33.21	■■■□□ 2.91
STUB1-205	ENST00000565677	UBR3	Q6ZT12	1888 aa		33.21	■■■□□ 2.91
STUB1-205	ENST00000565677	IGKV5-2	P06315	115 aa		33.21	■■■□□ 2.91
STUB1-205	ENST00000565677	CWF19L2	Q2TBE0	894 aa	Known RBP	33.21	■■■□□ 2.91
STUB1-205	ENST00000565677	LINS1	Q8NG48	757 aa		33.21	■■■□□ 2.91
STUB1-205	ENST00000565677	NEXN	Q0ZGT2	675 aa		33.2	■■■□□ 2.91
STUB1-205	ENST00000565677	HLF	Q16534	295 aa		33.2	■■■□□ 2.91
STUB1-205	ENST00000565677		A0A087WZG4	1122 aa		33.19	■■■□□ 2.9
STUB1-205	ENST00000565677	ERVV-1	B6SEH8	477 aa		33.18	■■■□□ 2.9
STUB1-205	ENST00000565677	CAMTA2	O94983	1202 aa		33.18	■■■□□ 2.9
STUB1-205	ENST00000565677	HMGB2	P26583	209 aa	Known RBP	33.18	■■■□□ 2.9
STUB1-205	ENST00000565677	ZNF827	Q17R98	1081 aa		33.18	■■■□□ 2.9
STUB1-205	ENST00000565677	ATP5J2-PTCD1	G3V325	749 aa		33.17	■■■□□ 2.9
STUB1-205	ENST00000565677	ALDH1L1	O75891	902 aa		33.17	■■■□□ 2.9
STUB1-205	ENST00000565677	PHF14	O94880	888 aa		33.17	■■■□□ 2.9
STUB1-205	ENST00000565677	GIGYF2	Q6Y7W6	1299 aa	Known RBP	33.17	■■■□□ 2.9
STUB1-205	ENST00000565677	MEIS3	Q99687	375 aa		33.17	■■■□□ 2.9
STUB1-205	ENST00000565677	ZBTB40	Q9NUA8	1239 aa		33.17	■■■□□ 2.9
STUB1-205	ENST00000565677	BCOR	Q6W2J9	1755 aa		33.17	■■■□□ 2.9
STUB1-205	ENST00000565677	CCDC125	Q86Z20	511 aa		33.17	■■■□□ 2.9
STUB1-205	ENST00000565677	C4A	P0C0L4	1744 aa		33.16	■■■□□ 2.9
STUB1-205	ENST00000565677	NUP98	P52948	1817 aa		33.16	■■■□□ 2.9
STUB1-205	ENST00000565677	AFDN	P55196	1824 aa	Known RBP	33.16	■■■□□ 2.9
STUB1-205	ENST00000565677	NEURL1B	A8MQ27	555 aa		33.16	■■■□□ 2.9
STUB1-205	ENST00000565677	AKT1S1	Q96B36	256 aa		33.16	■■■□□ 2.9
STUB1-205	ENST00000565677	TCIRG1	Q13488	830 aa		33.15	■■■□□ 2.9
STUB1-205	ENST00000565677	ARHGEF1	Q92888	912 aa	Known RBP	33.15	■■■□□ 2.9
STUB1-205	ENST00000565677	SCN7A	Q01118	1682 aa		33.15	■■■□□ 2.9
STUB1-205	ENST00000565677	USP44	Q9H0E7	712 aa		33.14	■■■□□ 2.9
STUB1-205	ENST00000565677	TRAPPC3L	Q5T215	181 aa		33.13	■■■□□ 2.89
STUB1-205	ENST00000565677	CHMP4B	Q9H444	224 aa	Known RBP	33.13	■■■□□ 2.89
STUB1-205	ENST00000565677	PPP4R2	Q9NY27	417 aa		33.13	■■■□□ 2.89
STUB1-205	ENST00000565677	ANKRD36C	Q5JPF3	1778 aa		33.13	■■■□□ 2.89
STUB1-205	ENST00000565677	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.13	■■■□□ 2.89
STUB1-205	ENST00000565677	ISCA1	Q9BUE6	129 aa		33.13	■■■□□ 2.89
STUB1-205	ENST00000565677	AAMP	Q13685	434 aa		33.12	■■■□□ 2.89
STUB1-205	ENST00000565677	SRP68	Q9UHB9	627 aa	Known RBP	33.12	■■■□□ 2.89
STUB1-205	ENST00000565677	NARF	Q9UHQ1	456 aa		33.12	■■■□□ 2.89
STUB1-205	ENST00000565677	TUBGCP6	Q96RT7	1819 aa		33.11	■■■□□ 2.89
STUB1-205	ENST00000565677	ADRA2B	P18089	450 aa		33.11	■■■□□ 2.89
STUB1-205	ENST00000565677	SSFA2	P28290	1259 aa		33.11	■■■□□ 2.89
STUB1-205	ENST00000565677	C1orf115	Q9H7X2	142 aa		33.11	■■■□□ 2.89
STUB1-205	ENST00000565677	GCKR	Q14397	625 aa		33.1	■■■□□ 2.89
STUB1-205	ENST00000565677	HSP90AB3P	Q58FF7	597 aa		33.1	■■■□□ 2.89
STUB1-205	ENST00000565677	IBTK	Q9P2D0	1353 aa	Predicted RBP	33.1	■■■□□ 2.89
STUB1-205	ENST00000565677	TFCP2L1	Q9NZI6	479 aa		33.09	■■■□□ 2.89
STUB1-205	ENST00000565677	USPL1	Q5W0Q7	1092 aa		33.09	■■■□□ 2.89
STUB1-205	ENST00000565677	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.09	■■■□□ 2.89
STUB1-205	ENST00000565677	GNAI3	P08754	354 aa		33.08	■■■□□ 2.89
STUB1-205	ENST00000565677	NBPF7	P0C2Y1	421 aa	Predicted RBP	33.08	■■■□□ 2.89
STUB1-205	ENST00000565677	GPT	P24298	496 aa		33.08	■■■□□ 2.89
STUB1-205	ENST00000565677	RFC4	P35249	363 aa		33.08	■■■□□ 2.89
STUB1-205	ENST00000565677	BCL2L12	Q9HB09	334 aa		33.08	■■■□□ 2.89
STUB1-205	ENST00000565677	C9orf78	Q9NZ63	289 aa	Predicted RBP	33.08	■■■□□ 2.89
STUB1-205	ENST00000565677	PCDHB15	Q9Y5E8	787 aa		33.08	■■■□□ 2.89
STUB1-205	ENST00000565677	USP42	Q9H9J4	1324 aa	Known RBP	33.08	■■■□□ 2.89
STUB1-205	ENST00000565677	ZPR1	O75312	459 aa		33.07	■■■□□ 2.88
STUB1-205	ENST00000565677	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.07	■■■□□ 2.88
STUB1-205	ENST00000565677	CWC25	Q9NXE8	425 aa	Predicted RBP	33.07	■■■□□ 2.88
STUB1-205	ENST00000565677	GRM8	O00222	908 aa		33.06	■■■□□ 2.88
STUB1-205	ENST00000565677	TRIM28	Q13263	835 aa	Known RBP	33.06	■■■□□ 2.88
STUB1-205	ENST00000565677	ZNF34	Q8IZ26	560 aa		33.06	■■■□□ 2.88
STUB1-205	ENST00000565677	CCDC191	Q8NCU4	936 aa		33.06	■■■□□ 2.88
STUB1-205	ENST00000565677	ZNF652	Q9Y2D9	606 aa		33.06	■■■□□ 2.88
STUB1-205	ENST00000565677	UBTFL1	P0CB47	393 aa	Predicted RBP	33.05	■■■□□ 2.88
STUB1-205	ENST00000565677	B4GALNT3	Q6L9W6	998 aa		33.04	■■■□□ 2.88
STUB1-205	ENST00000565677	CLEC4G	Q6UXB4	293 aa		33.04	■■■□□ 2.88
STUB1-205	ENST00000565677	UTY	O14607	1347 aa		33.04	■■■□□ 2.88
STUB1-205	ENST00000565677	RGL2	O15211	777 aa		33.04	■■■□□ 2.88
STUB1-205	ENST00000565677	NLRP10	Q86W26	655 aa		33.04	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms