RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 NMRK2Q9NPI5 230 aa20.88■□□□□ 0.93
THUMPD1-203ENST00000565248 PARP3Q9Y6F1 533 aa20.88■□□□□ 0.93
THUMPD1-203ENST00000565248 KCNQ3O43525 872 aa20.87■□□□□ 0.93
THUMPD1-203ENST00000565248 RFC4P35249 363 aa20.87■□□□□ 0.93
THUMPD1-203ENST00000565248 PDE3AQ14432 1141 aa20.87■□□□□ 0.93
THUMPD1-203ENST00000565248 MRPL50Q8N5N7 158 aaKnown RBP20.87■□□□□ 0.93
THUMPD1-203ENST00000565248 ATG3Q9NT62 314 aa20.87■□□□□ 0.93
THUMPD1-203ENST00000565248 KIAA1551Q9HCM1 1747 aa20.87■□□□□ 0.93
THUMPD1-203ENST00000565248 C10orf71Q711Q0 1435 aa20.87■□□□□ 0.93
THUMPD1-203ENST00000565248 SLC39A6Q13433 755 aa20.86■□□□□ 0.93
THUMPD1-203ENST00000565248 HDGFL1Q5TGJ6 251 aa20.86■□□□□ 0.93
THUMPD1-203ENST00000565248 WDR90Q96KV7 1748 aa20.86■□□□□ 0.93
THUMPD1-203ENST00000565248 KDM2BQ8NHM5 1336 aa20.85■□□□□ 0.93
THUMPD1-203ENST00000565248 DPEP1P16444 411 aa20.85■□□□□ 0.93
THUMPD1-203ENST00000565248 RC3H1Q5TC82 1133 aaKnown RBP20.85■□□□□ 0.93
THUMPD1-203ENST00000565248 RBM42Q9BTD8 480 aaKnown RBP20.85■□□□□ 0.93
THUMPD1-203ENST00000565248 HEG1Q9ULI3 1381 aa20.85■□□□□ 0.93
THUMPD1-203ENST00000565248 FSTL1Q12841 308 aa20.84■□□□□ 0.93
THUMPD1-203ENST00000565248 FTSJ3Q8IY81 847 aaKnown RBP20.84■□□□□ 0.93
THUMPD1-203ENST00000565248 ARHGAP45Q92619 1136 aa20.84■□□□□ 0.93
THUMPD1-203ENST00000565248 ARHGEF1Q92888 912 aaKnown RBP20.84■□□□□ 0.93
THUMPD1-203ENST00000565248 NOB1Q9ULX3 412 aaKnown RBP20.84■□□□□ 0.93
THUMPD1-203ENST00000565248 C4AP0C0L4 1744 aa20.84■□□□□ 0.93
THUMPD1-203ENST00000565248 SNRPA1P09661 255 aaKnown RBP20.83■□□□□ 0.93
THUMPD1-203ENST00000565248 C9orf131Q5VYM1 1079 aa20.83■□□□□ 0.93
THUMPD1-203ENST00000565248 ATF7IPQ6VMQ6 1270 aa20.83■□□□□ 0.93
THUMPD1-203ENST00000565248 API5Q9BZZ5 524 aaKnown RBP20.83■□□□□ 0.93
THUMPD1-203ENST00000565248 PIM2Q9P1W9 311 aa20.83■□□□□ 0.93
THUMPD1-203ENST00000565248 ZNF831Q5JPB2 1677 aa20.83■□□□□ 0.92
THUMPD1-203ENST00000565248 TCERG1O14776 1098 aaKnown RBP20.82■□□□□ 0.92
THUMPD1-203ENST00000565248 GYS1P13807 737 aa20.82■□□□□ 0.92
THUMPD1-203ENST00000565248 KLRG1Q96E93 195 aa20.82■□□□□ 0.92
THUMPD1-203ENST00000565248 ZNF496Q96IT1 587 aaPredicted RBP20.82■□□□□ 0.92
THUMPD1-203ENST00000565248 ARFGEF1Q9Y6D6 1849 aa20.82■□□□□ 0.92
THUMPD1-203ENST00000565248 BRCA1P38398 1863 aaKnown RBP20.81■□□□□ 0.92
THUMPD1-203ENST00000565248 CNTNAP4Q9C0A0 1308 aa20.81■□□□□ 0.92
THUMPD1-203ENST00000565248 RPS6KA4O75676 772 aa20.81■□□□□ 0.92
THUMPD1-203ENST00000565248 SLC4A2P04920 1241 aa20.81■□□□□ 0.92
THUMPD1-203ENST00000565248 EIF2S2P20042 333 aaKnown RBP20.81■□□□□ 0.92
THUMPD1-203ENST00000565248 PTPRCP08575 1304 aa20.8■□□□□ 0.92
THUMPD1-203ENST00000565248 DALRD3Q5D0E6 543 aaKnown RBP20.8■□□□□ 0.92
THUMPD1-203ENST00000565248 DZIP1LQ8IYY4 767 aaKnown RBP20.8■□□□□ 0.92
THUMPD1-203ENST00000565248 JMYQ8N9B5 988 aa20.79■□□□□ 0.92
THUMPD1-203ENST00000565248 NECTIN2Q92692 538 aa20.79■□□□□ 0.92
THUMPD1-203ENST00000565248 DBF4Q9UBU7 674 aaPredicted RBP20.79■□□□□ 0.92
THUMPD1-203ENST00000565248 TRIM27P14373 513 aa20.78■□□□□ 0.92
THUMPD1-203ENST00000565248 CRBNQ96SW2 442 aa20.78■□□□□ 0.92
THUMPD1-203ENST00000565248 RNF181Q9P0P0 153 aa20.78■□□□□ 0.92
THUMPD1-203ENST00000565248 COL5A3P25940 1745 aaPredicted RBP20.78■□□□□ 0.92
THUMPD1-203ENST00000565248 C20orf194Q5TEA3 1177 aa20.77■□□□□ 0.92
THUMPD1-203ENST00000565248 TEX13AQ9BXU3 409 aaPredicted RBP20.77■□□□□ 0.92
THUMPD1-203ENST00000565248 PTCD1O75127 700 aaKnown RBP20.76■□□□□ 0.91
THUMPD1-203ENST00000565248 KCNA3P22001 575 aa20.76■□□□□ 0.91
THUMPD1-203ENST00000565248 VSIG10Q8N0Z9 540 aa20.76■□□□□ 0.91
THUMPD1-203ENST00000565248 PANK1Q8TE04 598 aa20.76■□□□□ 0.91
THUMPD1-203ENST00000565248 CLUAP1Q96AJ1 413 aa20.76■□□□□ 0.91
THUMPD1-203ENST00000565248 SLC4A9Q96Q91 983 aa20.76■□□□□ 0.91
THUMPD1-203ENST00000565248 PPP4R2Q9NY27 417 aa20.76■□□□□ 0.91
THUMPD1-203ENST00000565248 KCPQ6ZWJ8 1503 aa20.76■□□□□ 0.91
THUMPD1-203ENST00000565248 UBR2Q8IWV8 1755 aa20.76■□□□□ 0.91
THUMPD1-203ENST00000565248 HTRA3P83110 453 aa20.75■□□□□ 0.91
THUMPD1-203ENST00000565248 COL13A1Q5TAT6 717 aaPredicted RBP20.75■□□□□ 0.91
THUMPD1-203ENST00000565248 EXOC6Q8TAG9 804 aa20.75■□□□□ 0.91
THUMPD1-203ENST00000565248 RRAGCQ9HB90 399 aa20.75■□□□□ 0.91
THUMPD1-203ENST00000565248 HYPKQ9NX55 129 aa20.75■□□□□ 0.91
THUMPD1-203ENST00000565248 CHPF2Q9P2E5 772 aa20.75■□□□□ 0.91
THUMPD1-203ENST00000565248 ERBB4Q15303 1308 aa20.75■□□□□ 0.91
THUMPD1-203ENST00000565248 FLIIQ13045 1269 aa20.74■□□□□ 0.91
THUMPD1-203ENST00000565248 AAMPQ13685 434 aa20.74■□□□□ 0.91
THUMPD1-203ENST00000565248 SMC1BQ8NDV3 1235 aa20.74■□□□□ 0.91
THUMPD1-203ENST00000565248 CNKSR2Q8WXI2 1034 aa20.74■□□□□ 0.91
THUMPD1-203ENST00000565248 CHMP4BQ9H444 224 aaKnown RBP20.74■□□□□ 0.91
THUMPD1-203ENST00000565248 CACNA1FO60840 1977 aa20.74■□□□□ 0.91
THUMPD1-203ENST00000565248 TNRC6CQ9HCJ0 1690 aaKnown RBP20.73■□□□□ 0.91
THUMPD1-203ENST00000565248 TNS4Q8IZW8 715 aa20.73■□□□□ 0.91
THUMPD1-203ENST00000565248 DDX21Q9NR30 783 aaKnown RBP eCLIP20.73■□□□□ 0.91
THUMPD1-203ENST00000565248 COG6Q9Y2V7 657 aa20.73■□□□□ 0.91
THUMPD1-203ENST00000565248 FKBP5Q13451 457 aaPredicted RBP20.72■□□□□ 0.91
THUMPD1-203ENST00000565248 MVPQ14764 893 aaKnown RBP20.72■□□□□ 0.91
THUMPD1-203ENST00000565248 MYH14Q7Z406 1995 aaKnown RBP20.72■□□□□ 0.91
THUMPD1-203ENST00000565248 LAMB4A4D0S4 1761 aa20.72■□□□□ 0.91
THUMPD1-203ENST00000565248 PRAMEF22A3QJZ6 481 aa20.71■□□□□ 0.91
THUMPD1-203ENST00000565248 CAPN15O75808 1086 aa20.71■□□□□ 0.91
THUMPD1-203ENST00000565248 STARD3NLO95772 234 aa20.71■□□□□ 0.91
THUMPD1-203ENST00000565248 CRKLP46109 303 aaKnown RBP20.71■□□□□ 0.91
THUMPD1-203ENST00000565248 ITPRIPQ8IWB1 547 aa20.71■□□□□ 0.91
THUMPD1-203ENST00000565248 DDX19BQ9UMR2 479 aa20.71■□□□□ 0.91
THUMPD1-203ENST00000565248 ABCC4O15439 1325 aa20.71■□□□□ 0.91
THUMPD1-203ENST00000565248 PCNTO95613 3336 aa20.71■□□□□ 0.91
THUMPD1-203ENST00000565248 DDX58O95786 925 aaKnown RBP20.7■□□□□ 0.9
THUMPD1-203ENST00000565248 RLBP1P12271 317 aa20.7■□□□□ 0.9
THUMPD1-203ENST00000565248 G2E3Q7L622 706 aa20.7■□□□□ 0.9
THUMPD1-203ENST00000565248 TNNQ9UQP3 1299 aa20.7■□□□□ 0.9
THUMPD1-203ENST00000565248 USP16Q9Y5T5 823 aa20.7■□□□□ 0.9
THUMPD1-203ENST00000565248 SBF1O95248 1867 aa20.7■□□□□ 0.9
THUMPD1-203ENST00000565248 SRP68Q9UHB9 627 aaKnown RBP20.69■□□□□ 0.9
THUMPD1-203ENST00000565248 USP42Q9H9J4 1324 aaKnown RBP20.69■□□□□ 0.9
THUMPD1-203ENST00000565248 ZC3H4Q9UPT8 1303 aaKnown RBP20.69■□□□□ 0.9
THUMPD1-203ENST00000565248 CHRNA5P30532 468 aa20.68■□□□□ 0.9
THUMPD1-203ENST00000565248 TMEM57Q8N5G2 664 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms