RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 BABAM1Q9NWV8 329 aa21.71■■□□□ 1.07
CDT1-202ENST00000562747 MIS18AQ9NYP9 233 aa21.71■■□□□ 1.07
CDT1-202ENST00000562747 SNRPA1P09661 255 aaKnown RBP21.7■■□□□ 1.06
CDT1-202ENST00000562747 LMNB1P20700 586 aa21.7■■□□□ 1.06
CDT1-202ENST00000562747 TBC1D9BQ66K14 1250 aa21.7■■□□□ 1.06
CDT1-202ENST00000562747 TRIM35Q9UPQ4 493 aa21.7■■□□□ 1.06
CDT1-202ENST00000562747 ZC3H4Q9UPT8 1303 aaKnown RBP21.7■■□□□ 1.06
CDT1-202ENST00000562747 CACNA1SQ13698 1873 aa21.69■■□□□ 1.06
CDT1-202ENST00000562747 FER1L6Q2WGJ9 1857 aa21.69■■□□□ 1.06
CDT1-202ENST00000562747 APAF1O14727 1248 aa21.69■■□□□ 1.06
CDT1-202ENST00000562747 CCDC24Q8N4L8 307 aa21.68■■□□□ 1.06
CDT1-202ENST00000562747 JMYQ8N9B5 988 aa21.68■■□□□ 1.06
CDT1-202ENST00000562747 DICER1Q9UPY3 1922 aaKnown RBP21.67■■□□□ 1.06
CDT1-202ENST00000562747 SMC1BQ8NDV3 1235 aa21.67■■□□□ 1.06
CDT1-202ENST00000562747 TSPYL4Q9UJ04 414 aa21.67■■□□□ 1.06
CDT1-202ENST00000562747 GLTPD2A6NH11 291 aa21.66■■□□□ 1.06
CDT1-202ENST00000562747 H0YIN7 160 aa21.66■■□□□ 1.06
CDT1-202ENST00000562747 EIF4A1P60842 406 aaKnown RBP21.66■■□□□ 1.06
CDT1-202ENST00000562747 USP16Q9Y5T5 823 aa21.66■■□□□ 1.06
CDT1-202ENST00000562747 ARFGEF2Q9Y6D5 1785 aa21.66■■□□□ 1.06
CDT1-202ENST00000562747 A0A087WZG4 1122 aa21.65■■□□□ 1.06
CDT1-202ENST00000562747 PRAMEF22A3QJZ6 481 aa21.65■■□□□ 1.06
CDT1-202ENST00000562747 PRR5LQ6MZQ0 368 aa21.65■■□□□ 1.06
CDT1-202ENST00000562747 TBC1D2BQ9UPU7 963 aa21.65■■□□□ 1.06
CDT1-202ENST00000562747 ZNF330Q9Y3S2 320 aaPredicted RBP21.65■■□□□ 1.06
CDT1-202ENST00000562747 LAMB4A4D0S4 1761 aa21.64■■□□□ 1.06
CDT1-202ENST00000562747 IL6STP40189 918 aaPredicted RBP21.64■■□□□ 1.05
CDT1-202ENST00000562747 SLX4Q8IY92 1834 aa21.64■■□□□ 1.05
CDT1-202ENST00000562747 POTECB2RU33 542 aa21.63■■□□□ 1.05
CDT1-202ENST00000562747 A1BGP04217 495 aa21.63■■□□□ 1.05
CDT1-202ENST00000562747 ZNF219Q9P2Y4 722 aaPredicted RBP21.63■■□□□ 1.05
CDT1-202ENST00000562747 CHL1O00533 1208 aa21.62■■□□□ 1.05
CDT1-202ENST00000562747 VEGFAP15692 232 aaPredicted RBP21.62■■□□□ 1.05
CDT1-202ENST00000562747 COL13A1Q5TAT6 717 aaPredicted RBP21.62■■□□□ 1.05
CDT1-202ENST00000562747 ZNF622Q969S3 477 aaKnown RBP eCLIP21.62■■□□□ 1.05
CDT1-202ENST00000562747 C21orf2O43822 256 aa21.61■■□□□ 1.05
CDT1-202ENST00000562747 CAMTA2O94983 1202 aa21.61■■□□□ 1.05
CDT1-202ENST00000562747 CALD1Q05682 793 aaKnown RBP21.61■■□□□ 1.05
CDT1-202ENST00000562747 NCBP3Q53F19 620 aaKnown RBP21.61■■□□□ 1.05
CDT1-202ENST00000562747 BRIP1Q9BX63 1249 aa21.61■■□□□ 1.05
CDT1-202ENST00000562747 NPM2Q86SE8 214 aaKnown RBP21.6■■□□□ 1.05
CDT1-202ENST00000562747 CFAP44Q96MT7 982 aa21.6■■□□□ 1.05
CDT1-202ENST00000562747 PCNTO95613 3336 aa21.59■■□□□ 1.05
CDT1-202ENST00000562747 PDE6BP35913 854 aa21.59■■□□□ 1.05
CDT1-202ENST00000562747 PIP4K2AP48426 406 aaPredicted RBP21.59■■□□□ 1.05
CDT1-202ENST00000562747 CCDC27Q2M243 656 aa21.59■■□□□ 1.05
CDT1-202ENST00000562747 LAS1LQ9Y4W2 734 aaKnown RBP21.58■■□□□ 1.05
CDT1-202ENST00000562747 FAM9BQ8IZU0 186 aa21.57■■□□□ 1.04
CDT1-202ENST00000562747 CNBD1Q8NA66 436 aa21.57■■□□□ 1.04
CDT1-202ENST00000562747 NBPF26B4DH59 902 aa21.56■■□□□ 1.04
CDT1-202ENST00000562747 ZNF853P0CG23 659 aa21.56■■□□□ 1.04
CDT1-202ENST00000562747 NBPF10Q6P3W6 841 aaKnown RBP21.56■■□□□ 1.04
CDT1-202ENST00000562747 NBPF15Q8N660 670 aa21.56■■□□□ 1.04
CDT1-202ENST00000562747 IFT57Q9NWB7 429 aa21.56■■□□□ 1.04
CDT1-202ENST00000562747 LTBP3Q9NS15 1303 aa21.55■■□□□ 1.04
CDT1-202ENST00000562747 GNAI1P63096 354 aa21.55■■□□□ 1.04
CDT1-202ENST00000562747 ERFEQ4G0M1 354 aa21.55■■□□□ 1.04
CDT1-202ENST00000562747 DZIP3Q86Y13 1208 aaKnown RBP21.55■■□□□ 1.04
CDT1-202ENST00000562747 SETDB2Q96T68 719 aa21.55■■□□□ 1.04
CDT1-202ENST00000562747 PDZRN3Q9UPQ7 1066 aa21.55■■□□□ 1.04
CDT1-202ENST00000562747 ERBB4Q15303 1308 aa21.55■■□□□ 1.04
CDT1-202ENST00000562747 CCER2I3L3R5 266 aa21.54■■□□□ 1.04
CDT1-202ENST00000562747 SRGNP10124 158 aa21.54■■□□□ 1.04
CDT1-202ENST00000562747 PRPF40BQ6NWY9 871 aaKnown RBP21.54■■□□□ 1.04
CDT1-202ENST00000562747 POTEIP0CG38 1075 aa21.53■■□□□ 1.04
CDT1-202ENST00000562747 POTEJP0CG39 1038 aa21.53■■□□□ 1.04
CDT1-202ENST00000562747 STYK1Q6J9G0 422 aa21.53■■□□□ 1.04
CDT1-202ENST00000562747 WWC1Q8IX03 1113 aa21.53■■□□□ 1.04
CDT1-202ENST00000562747 TAOK3Q9H2K8 898 aa21.53■■□□□ 1.04
CDT1-202ENST00000562747 MBIPQ9NS73 344 aa21.53■■□□□ 1.04
CDT1-202ENST00000562747 ST5P78524 1137 aa21.52■■□□□ 1.04
CDT1-202ENST00000562747 DPY19L2Q6NUT2 758 aa21.52■■□□□ 1.04
CDT1-202ENST00000562747 HOXB7P09629 217 aa21.51■■□□□ 1.03
CDT1-202ENST00000562747 NGEFQ8N5V2 710 aa21.51■■□□□ 1.03
CDT1-202ENST00000562747 RGL2O15211 777 aa21.5■■□□□ 1.03
CDT1-202ENST00000562747 NPHP1O15259 732 aa21.5■■□□□ 1.03
CDT1-202ENST00000562747 DDNO94850 711 aaPredicted RBP21.5■■□□□ 1.03
CDT1-202ENST00000562747 DIEXFQ68CQ4 756 aaKnown RBP21.5■■□□□ 1.03
CDT1-202ENST00000562747 CNKSR1Q969H4 720 aa21.5■■□□□ 1.03
CDT1-202ENST00000562747 MASTLQ96GX5 879 aa21.5■■□□□ 1.03
CDT1-202ENST00000562747 HSPA1AP0DMV8 641 aaKnown RBP21.49■■□□□ 1.03
CDT1-202ENST00000562747 HSPA1BP0DMV9 641 aaKnown RBP21.49■■□□□ 1.03
CDT1-202ENST00000562747 EIF2S2P20042 333 aaKnown RBP21.49■■□□□ 1.03
CDT1-202ENST00000562747 KRT24Q2M2I5 525 aa21.49■■□□□ 1.03
CDT1-202ENST00000562747 CLEC4GQ6UXB4 293 aa21.49■■□□□ 1.03
CDT1-202ENST00000562747 IL16Q14005 1332 aa21.49■■□□□ 1.03
CDT1-202ENST00000562747 NBPF5PQ86XG9 351 aaPredicted RBP21.48■■□□□ 1.03
CDT1-202ENST00000562747 C7orf43Q8WVR3 580 aa21.48■■□□□ 1.03
CDT1-202ENST00000562747 ZNF652Q9Y2D9 606 aa21.48■■□□□ 1.03
CDT1-202ENST00000562747 CAPN15O75808 1086 aa21.47■■□□□ 1.03
CDT1-202ENST00000562747 MYL6BP14649 208 aa21.47■■□□□ 1.03
CDT1-202ENST00000562747 TNS4Q8IZW8 715 aa21.47■■□□□ 1.03
CDT1-202ENST00000562747 SCN4AP35499 1836 aa21.46■■□□□ 1.03
CDT1-202ENST00000562747 PDIA6Q15084 440 aa21.46■■□□□ 1.03
CDT1-202ENST00000562747 DUSP27Q5VZP5 1158 aa21.46■■□□□ 1.03
CDT1-202ENST00000562747 CHADLQ6NUI6 762 aa21.46■■□□□ 1.03
CDT1-202ENST00000562747 OLFM4Q6UX06 510 aa21.46■■□□□ 1.03
CDT1-202ENST00000562747 WDR63Q8IWG1 891 aa21.46■■□□□ 1.03
CDT1-202ENST00000562747 ERVV-1B6SEH8 477 aa21.45■■□□□ 1.02
CDT1-202ENST00000562747 LRP10Q7Z4F1 713 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms