RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 SLC4A9Q96Q91 983 aa17.9■□□□□ 0.46
COMMD4-205ENST00000562310 ANKRD36CQ5JPF3 1778 aa17.89■□□□□ 0.45
COMMD4-205ENST00000562310 KCNQ2O43526 872 aa17.89■□□□□ 0.45
COMMD4-205ENST00000562310 HMMRO75330 724 aa17.89■□□□□ 0.45
COMMD4-205ENST00000562310 USP44Q9H0E7 712 aa17.89■□□□□ 0.45
COMMD4-205ENST00000562310 ATP6V1AP38606 617 aa17.88■□□□□ 0.45
COMMD4-205ENST00000562310 PIP4K2AP48426 406 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-205ENST00000562310 CEP85Q6P2H3 762 aa17.88■□□□□ 0.45
COMMD4-205ENST00000562310 KIF6Q6ZMV9 814 aa17.88■□□□□ 0.45
COMMD4-205ENST00000562310 SMC5Q8IY18 1101 aa17.88■□□□□ 0.45
COMMD4-205ENST00000562310 GCC1Q96CN9 775 aa17.88■□□□□ 0.45
COMMD4-205ENST00000562310 IL6STP40189 918 aaPredicted RBP17.87■□□□□ 0.45
COMMD4-205ENST00000562310 FAM196AQ6ZSG2 479 aa17.87■□□□□ 0.45
COMMD4-205ENST00000562310 KRT27Q7Z3Y8 459 aa17.87■□□□□ 0.45
COMMD4-205ENST00000562310 CCDC87Q9NVE4 849 aa17.86■□□□□ 0.45
COMMD4-205ENST00000562310 C9orf78Q9NZ63 289 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-205ENST00000562310 UTYO14607 1347 aa17.86■□□□□ 0.45
COMMD4-205ENST00000562310 TAF1LQ8IZX4 1826 aa17.86■□□□□ 0.45
COMMD4-205ENST00000562310 NEURL1BA8MQ27 555 aa17.85■□□□□ 0.45
COMMD4-205ENST00000562310 NPM2Q86SE8 214 aaKnown RBP17.85■□□□□ 0.45
COMMD4-205ENST00000562310 SIRT2Q8IXJ6 389 aa17.85■□□□□ 0.45
COMMD4-205ENST00000562310 MYD88Q99836 296 aa17.85■□□□□ 0.45
COMMD4-205ENST00000562310 BCL11BQ9C0K0 894 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-205ENST00000562310 GRM8O00222 908 aa17.84■□□□□ 0.45
COMMD4-205ENST00000562310 IGKV5-2P06315 115 aa17.84■□□□□ 0.45
COMMD4-205ENST00000562310 TTLL7Q6ZT98 887 aa17.84■□□□□ 0.45
COMMD4-205ENST00000562310 ZBTB1Q9Y2K1 713 aa17.84■□□□□ 0.45
COMMD4-205ENST00000562310 LRRFIP2Q9Y608 721 aaKnown RBP17.84■□□□□ 0.45
COMMD4-205ENST00000562310 MYH14Q7Z406 1995 aaKnown RBP17.84■□□□□ 0.45
COMMD4-205ENST00000562310 BCORQ6W2J9 1755 aa17.84■□□□□ 0.45
COMMD4-205ENST00000562310 COL15A1P39059 1388 aa17.83■□□□□ 0.45
COMMD4-205ENST00000562310 MAP3K15Q6ZN16 1313 aa17.83■□□□□ 0.44
COMMD4-205ENST00000562310 CNTNAP4Q9C0A0 1308 aa17.83■□□□□ 0.44
COMMD4-205ENST00000562310 CRKLP46109 303 aaKnown RBP17.83■□□□□ 0.44
COMMD4-205ENST00000562310 ITPK1Q13572 414 aa17.83■□□□□ 0.44
COMMD4-205ENST00000562310 GCKRQ14397 625 aa17.83■□□□□ 0.44
COMMD4-205ENST00000562310 CWF19L2Q2TBE0 894 aaKnown RBP17.83■□□□□ 0.44
COMMD4-205ENST00000562310 NUP98P52948 1817 aa17.83■□□□□ 0.44
COMMD4-205ENST00000562310 RXRBP28702 533 aa17.82■□□□□ 0.44
COMMD4-205ENST00000562310 HSP90AB3PQ58FF7 597 aa17.82■□□□□ 0.44
COMMD4-205ENST00000562310 DCTPP1Q9H773 170 aa17.82■□□□□ 0.44
COMMD4-205ENST00000562310 PDZRN3Q9UPQ7 1066 aa17.82■□□□□ 0.44
COMMD4-205ENST00000562310 NBPF7P0C2Y1 421 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-205ENST00000562310 ATP8B2P98198 1209 aa17.81■□□□□ 0.44
COMMD4-205ENST00000562310 FAM182BQ5T319 152 aa17.81■□□□□ 0.44
COMMD4-205ENST00000562310 INTS5Q6P9B9 1019 aaKnown RBP17.81■□□□□ 0.44
COMMD4-205ENST00000562310 ZBTB3Q9H5J0 574 aa17.81■□□□□ 0.44
COMMD4-205ENST00000562310 ZNF330Q9Y3S2 320 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-205ENST00000562310 ERVV-1B6SEH8 477 aa17.8■□□□□ 0.44
COMMD4-205ENST00000562310 HMGB2P26583 209 aaKnown RBP17.8■□□□□ 0.44
COMMD4-205ENST00000562310 EIF5P55010 431 aaKnown RBP17.8■□□□□ 0.44
COMMD4-205ENST00000562310 NUCB1Q02818 461 aa17.8■□□□□ 0.44
COMMD4-205ENST00000562310 MTX1Q13505 466 aa17.8■□□□□ 0.44
COMMD4-205ENST00000562310 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
COMMD4-205ENST00000562310 CWC25Q9NXE8 425 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-205ENST00000562310 SCN7AQ01118 1682 aa17.8■□□□□ 0.44
COMMD4-205ENST00000562310 A0A087WZG4 1122 aa17.79■□□□□ 0.44
COMMD4-205ENST00000562310 TRIM28Q13263 835 aaKnown RBP17.79■□□□□ 0.44
COMMD4-205ENST00000562310 RC3H1Q5TC82 1133 aaKnown RBP17.79■□□□□ 0.44
COMMD4-205ENST00000562310 C4BP0C0L5 1744 aa17.78■□□□□ 0.44
COMMD4-205ENST00000562310 TCIRG1Q13488 830 aa17.78■□□□□ 0.44
COMMD4-205ENST00000562310 GIGYF2Q6Y7W6 1299 aaKnown RBP17.78■□□□□ 0.44
COMMD4-205ENST00000562310 PTF1AQ7RTS3 328 aa17.78■□□□□ 0.44
COMMD4-205ENST00000562310 DZIP3Q86Y13 1208 aaKnown RBP17.78■□□□□ 0.44
COMMD4-205ENST00000562310 LINC00116Q8NCU8 138 aa17.78■□□□□ 0.44
COMMD4-205ENST00000562310 SSH3Q8TE77 659 aa17.78■□□□□ 0.44
COMMD4-205ENST00000562310 ISCA1Q9BUE6 129 aa17.78■□□□□ 0.44
COMMD4-205ENST00000562310 ZBTB47Q9UFB7 747 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-205ENST00000562310 CCNL1Q9UK58 526 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-205ENST00000562310 RGPD3A6NKT7 1758 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-205ENST00000562310 RGPD4Q7Z3J3 1758 aa17.78■□□□□ 0.44
COMMD4-205ENST00000562310 RGL2O15211 777 aa17.77■□□□□ 0.44
COMMD4-205ENST00000562310 POLA2Q14181 598 aa17.77■□□□□ 0.44
COMMD4-205ENST00000562310 CHD1LQ86WJ1 897 aa17.77■□□□□ 0.44
COMMD4-205ENST00000562310 ATP5J2-PTCD1G3V325 749 aa17.76■□□□□ 0.43
COMMD4-205ENST00000562310 RGS3P49796 1198 aa17.76■□□□□ 0.43
COMMD4-205ENST00000562310 PNMA6EA0A0J9YXQ4 647 aa17.75■□□□□ 0.43
COMMD4-205ENST00000562310 SLC27A3Q5K4L6 730 aa17.75■□□□□ 0.43
COMMD4-205ENST00000562310 ANKRD45Q5TZF3 282 aa17.75■□□□□ 0.43
COMMD4-205ENST00000562310 UBE3BQ7Z3V4 1068 aa17.75■□□□□ 0.43
COMMD4-205ENST00000562310 PPP1R42Q7Z4L9 355 aa17.75■□□□□ 0.43
COMMD4-205ENST00000562310 SUCLG2Q96I99 432 aa17.75■□□□□ 0.43
COMMD4-205ENST00000562310 TNS1Q9HBL0 1735 aaKnown RBP17.75■□□□□ 0.43
COMMD4-205ENST00000562310 H7C1W4 665 aa17.74■□□□□ 0.43
COMMD4-205ENST00000562310 SRGAP3O43295 1099 aa17.74■□□□□ 0.43
COMMD4-205ENST00000562310 HSP90AB4PQ58FF6 505 aa17.74■□□□□ 0.43
COMMD4-205ENST00000562310 ARXQ96QS3 562 aa17.74■□□□□ 0.43
COMMD4-205ENST00000562310 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
COMMD4-205ENST00000562310 CASP7P55210 303 aa17.73■□□□□ 0.43
COMMD4-205ENST00000562310 UPF1Q92900 1129 aaKnown RBP eCLIP17.73■□□□□ 0.43
COMMD4-205ENST00000562310 LAMB2P55268 1798 aa17.73■□□□□ 0.43
COMMD4-205ENST00000562310 C4AP0C0L4 1744 aa17.72■□□□□ 0.43
COMMD4-205ENST00000562310 MYH3P11055 1940 aa17.72■□□□□ 0.43
COMMD4-205ENST00000562310 RAB11FIP3O75154 756 aa17.72■□□□□ 0.43
COMMD4-205ENST00000562310 RPS6KA4O75676 772 aa17.72■□□□□ 0.43
COMMD4-205ENST00000562310 TRIM37O94972 964 aa17.72■□□□□ 0.43
COMMD4-205ENST00000562310 CAMTA2O94983 1202 aa17.72■□□□□ 0.43
COMMD4-205ENST00000562310 PCCAP05165 728 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-205ENST00000562310 SKAP1Q86WV1 359 aa17.72■□□□□ 0.43
COMMD4-205ENST00000562310 LNPKQ9C0E8 428 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms