RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 BRIP1Q9BX63 1249 aa13.51□□□□□ -0.25
SNRPA1-212ENST00000560496 LAMB2P55268 1798 aa13.5□□□□□ -0.25
SNRPA1-212ENST00000560496 H0YIN7 160 aa13.5□□□□□ -0.25
SNRPA1-212ENST00000560496 CNBD1Q8NA66 436 aa13.5□□□□□ -0.25
SNRPA1-212ENST00000560496 SNED1Q8TER0 1413 aa13.49□□□□□ -0.25
SNRPA1-212ENST00000560496 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
SNRPA1-212ENST00000560496 LMNB1P20700 586 aa13.49□□□□□ -0.25
SNRPA1-212ENST00000560496 PDE6BP35913 854 aa13.49□□□□□ -0.25
SNRPA1-212ENST00000560496 ABCC12Q96J65 1359 aa13.48□□□□□ -0.25
SNRPA1-212ENST00000560496 RGL2O15211 777 aa13.48□□□□□ -0.25
SNRPA1-212ENST00000560496 TAF7Q15545 349 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-212ENST00000560496 NFE2L2Q16236 605 aa13.48□□□□□ -0.25
SNRPA1-212ENST00000560496 CLEC4GQ6UXB4 293 aa13.48□□□□□ -0.25
SNRPA1-212ENST00000560496 RBM46Q8TBY0 533 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-212ENST00000560496 SETDB2Q96T68 719 aa13.48□□□□□ -0.25
SNRPA1-212ENST00000560496 THUMPD2Q9BTF0 503 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-212ENST00000560496 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
SNRPA1-212ENST00000560496 RIC1Q4ADV7 1423 aa13.47□□□□□ -0.25
SNRPA1-212ENST00000560496 LTBP3Q9NS15 1303 aa13.47□□□□□ -0.25
SNRPA1-212ENST00000560496 SRGNP10124 158 aa13.47□□□□□ -0.25
SNRPA1-212ENST00000560496 ST5P78524 1137 aa13.47□□□□□ -0.25
SNRPA1-212ENST00000560496 ZNF622Q969S3 477 aaKnown RBP eCLIP13.47□□□□□ -0.254e-8■□□□□ 8.8
SNRPA1-212ENST00000560496 MIS18AQ9NYP9 233 aa13.47□□□□□ -0.25
SNRPA1-212ENST00000560496 ADAMTSL1Q8N6G6 1762 aa13.46□□□□□ -0.25
SNRPA1-212ENST00000560496 C21orf2O43822 256 aa13.46□□□□□ -0.25
SNRPA1-212ENST00000560496 APLP1P51693 650 aa13.46□□□□□ -0.25
SNRPA1-212ENST00000560496 STYK1Q6J9G0 422 aa13.46□□□□□ -0.25
SNRPA1-212ENST00000560496 PRPF40BQ6NWY9 871 aaKnown RBP13.46□□□□□ -0.25
SNRPA1-212ENST00000560496 NPM2Q86SE8 214 aaKnown RBP13.46□□□□□ -0.25
SNRPA1-212ENST00000560496 ZNF652Q9Y2D9 606 aa13.46□□□□□ -0.25
SNRPA1-212ENST00000560496 SCN4AP35499 1836 aa13.46□□□□□ -0.26
SNRPA1-212ENST00000560496 IBTKQ9P2D0 1353 aaPredicted RBP13.45□□□□□ -0.26
SNRPA1-212ENST00000560496 MAPK8IP3Q9UPT6 1336 aa13.45□□□□□ -0.26
SNRPA1-212ENST00000560496 GLTPD2A6NH11 291 aa13.45□□□□□ -0.26
SNRPA1-212ENST00000560496 EIF4A1P60842 406 aaKnown RBP13.45□□□□□ -0.26
SNRPA1-212ENST00000560496 HLFQ16534 295 aa13.45□□□□□ -0.26
SNRPA1-212ENST00000560496 RRAGCQ9HB90 399 aa13.45□□□□□ -0.26
SNRPA1-212ENST00000560496 RNF216Q9NWF9 866 aaPredicted RBP13.45□□□□□ -0.26
SNRPA1-212ENST00000560496 KLRG2A4D1S0 409 aaPredicted RBP13.44□□□□□ -0.26
SNRPA1-212ENST00000560496 FSTL1Q12841 308 aa13.44□□□□□ -0.26
SNRPA1-212ENST00000560496 NBPF5PQ86XG9 351 aaPredicted RBP13.44□□□□□ -0.26
SNRPA1-212ENST00000560496 PNISRQ8TF01 805 aaKnown RBP13.44□□□□□ -0.26
SNRPA1-212ENST00000560496 MASTLQ96GX5 879 aa13.44□□□□□ -0.26
SNRPA1-212ENST00000560496 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
SNRPA1-212ENST00000560496 NIP7Q9Y221 180 aaKnown RBP eCLIP13.44□□□□□ -0.26
SNRPA1-212ENST00000560496 COL4A5P29400 1685 aa13.44□□□□□ -0.26
SNRPA1-212ENST00000560496 UBN2Q6ZU65 1347 aa13.43□□□□□ -0.26
SNRPA1-212ENST00000560496 NPHP1O15259 732 aa13.43□□□□□ -0.26
SNRPA1-212ENST00000560496 NEFMP07197 916 aa13.43□□□□□ -0.26
SNRPA1-212ENST00000560496 DDX60Q8IY21 1712 aaKnown RBP13.43□□□□□ -0.26
SNRPA1-212ENST00000560496 C16orf71Q8IYS4 520 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-212ENST00000560496 DNAJC5GQ8N7S2 189 aa13.43□□□□□ -0.26
SNRPA1-212ENST00000560496 CNKSR1Q969H4 720 aa13.43□□□□□ -0.26
SNRPA1-212ENST00000560496 MAP3K15Q6ZN16 1313 aa13.42□□□□□ -0.26
SNRPA1-212ENST00000560496 MYBBP1AQ9BQG0 1328 aaKnown RBP13.42□□□□□ -0.26
SNRPA1-212ENST00000560496 LRRC37AA6NMS7 1700 aa13.42□□□□□ -0.26
SNRPA1-212ENST00000560496 POTECB2RU33 542 aa13.42□□□□□ -0.26
SNRPA1-212ENST00000560496 RALBP1Q15311 655 aa13.42□□□□□ -0.26
SNRPA1-212ENST00000560496 TTLL7Q6ZT98 887 aa13.42□□□□□ -0.26
SNRPA1-212ENST00000560496 LRP10Q7Z4F1 713 aa13.42□□□□□ -0.26
SNRPA1-212ENST00000560496 C7orf43Q8WVR3 580 aa13.42□□□□□ -0.26
SNRPA1-212ENST00000560496 CNKSR2Q8WXI2 1034 aa13.42□□□□□ -0.26
SNRPA1-212ENST00000560496 TAOK3Q9H2K8 898 aa13.42□□□□□ -0.26
SNRPA1-212ENST00000560496 HTRA3P83110 453 aa13.41□□□□□ -0.26
SNRPA1-212ENST00000560496 IFFO2Q5TF58 517 aa13.41□□□□□ -0.26
SNRPA1-212ENST00000560496 LTBP1Q14766 1721 aa13.41□□□□□ -0.26
SNRPA1-212ENST00000560496 ERBB4Q15303 1308 aa13.4□□□□□ -0.26
SNRPA1-212ENST00000560496 FAM177BA6PVY3 158 aa13.4□□□□□ -0.26
SNRPA1-212ENST00000560496 ERVV-1B6SEH8 477 aa13.4□□□□□ -0.26
SNRPA1-212ENST00000560496 NPR1P16066 1061 aa13.4□□□□□ -0.26
SNRPA1-212ENST00000560496 CRY2Q49AN0 593 aa13.4□□□□□ -0.26
SNRPA1-212ENST00000560496 ERFEQ4G0M1 354 aa13.4□□□□□ -0.26
SNRPA1-212ENST00000560496 SOGA3Q5TF21 947 aa13.4□□□□□ -0.26
SNRPA1-212ENST00000560496 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
SNRPA1-212ENST00000560496 MYL6BP14649 208 aa13.39□□□□□ -0.27
SNRPA1-212ENST00000560496 CCDC93Q567U6 631 aa13.39□□□□□ -0.27
SNRPA1-212ENST00000560496 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
SNRPA1-212ENST00000560496 TPTE2Q6XPS3 522 aa13.39□□□□□ -0.27
SNRPA1-212ENST00000560496 PNNQ9H307 717 aaKnown RBP13.39□□□□□ -0.27
SNRPA1-212ENST00000560496 TSPYL4Q9UJ04 414 aa13.39□□□□□ -0.27
SNRPA1-212ENST00000560496 NTSR2O95665 410 aa13.38□□□□□ -0.27
SNRPA1-212ENST00000560496 VEGFAP15692 232 aaPredicted RBP13.38□□□□□ -0.27
SNRPA1-212ENST00000560496 TMPOP42166 694 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-212ENST00000560496 PDIA6Q15084 440 aa13.38□□□□□ -0.27
SNRPA1-212ENST00000560496 KIF6Q6ZMV9 814 aa13.38□□□□□ -0.27
SNRPA1-212ENST00000560496 SLC51AQ86UW1 340 aa13.38□□□□□ -0.27
SNRPA1-212ENST00000560496 NUTM1Q86Y26 1132 aa13.38□□□□□ -0.27
SNRPA1-212ENST00000560496 NGEFQ8N5V2 710 aa13.38□□□□□ -0.27
SNRPA1-212ENST00000560496 ZBTB3Q9H5J0 574 aa13.38□□□□□ -0.27
SNRPA1-212ENST00000560496 RRP7AQ9Y3A4 280 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-212ENST00000560496 RIPK4P57078 832 aa13.37□□□□□ -0.27
SNRPA1-212ENST00000560496 FKBP4Q02790 459 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNRPA1-212ENST00000560496 DDX10Q13206 875 aaKnown RBP13.37□□□□□ -0.27
SNRPA1-212ENST00000560496 PROSER3Q2NL68 480 aa13.37□□□□□ -0.27
SNRPA1-212ENST00000560496 TAF1P21675 1872 aa13.37□□□□□ -0.27
SNRPA1-212ENST00000560496 COL4A1P02462 1669 aa13.37□□□□□ -0.27
SNRPA1-212ENST00000560496 ZNF541Q9H0D2 1346 aa13.37□□□□□ -0.27
SNRPA1-212ENST00000560496 DUOX1Q9NRD9 1551 aa13.37□□□□□ -0.27
SNRPA1-212ENST00000560496 DDNO94850 711 aaPredicted RBP13.36□□□□□ -0.27
SNRPA1-212ENST00000560496 GPTP24298 496 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms