RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 PPP1R1BQ9UD71 204 aaPredicted RBP15.93■□□□□ 0.14
GABPB1-208ENST00000558970 LRP10Q7Z4F1 713 aa15.92■□□□□ 0.14
GABPB1-208ENST00000558970 FLAD1Q8NFF5 587 aa15.92■□□□□ 0.14
GABPB1-208ENST00000558970 ZNF428Q96B54 188 aa15.92■□□□□ 0.14
GABPB1-208ENST00000558970 HYPKQ9NX55 129 aa15.92■□□□□ 0.14
GABPB1-208ENST00000558970 USP42Q9H9J4 1324 aaKnown RBP15.92■□□□□ 0.14
GABPB1-208ENST00000558970 A0A087WZG4 1122 aa15.91■□□□□ 0.14
GABPB1-208ENST00000558970 ADRA2BP18089 450 aa15.91■□□□□ 0.14
GABPB1-208ENST00000558970 BICDL1Q6ZP65 573 aa15.91■□□□□ 0.14
GABPB1-208ENST00000558970 CHMP4AQ9BY43 222 aa15.91■□□□□ 0.14
GABPB1-208ENST00000558970 ATF5Q9Y2D1 282 aaPredicted RBP15.91■□□□□ 0.14
GABPB1-208ENST00000558970 BCAR3O75815 825 aa15.9■□□□□ 0.14
GABPB1-208ENST00000558970 CT47B1P0C2W7 299 aaPredicted RBP15.9■□□□□ 0.14
GABPB1-208ENST00000558970 RARSP54136 660 aaKnown RBP15.9■□□□□ 0.14
GABPB1-208ENST00000558970 FKBP5Q13451 457 aaPredicted RBP15.9■□□□□ 0.14
GABPB1-208ENST00000558970 HLFQ16534 295 aa15.9■□□□□ 0.14
GABPB1-208ENST00000558970 MRPL50Q8N5N7 158 aaKnown RBP15.9■□□□□ 0.14
GABPB1-208ENST00000558970 NARFQ9UHQ1 456 aa15.9■□□□□ 0.14
GABPB1-208ENST00000558970 CAMTA2O94983 1202 aa15.89■□□□□ 0.13
GABPB1-208ENST00000558970 FLIIQ13045 1269 aa15.89■□□□□ 0.13
GABPB1-208ENST00000558970 FRAT1Q92837 279 aaPredicted RBP15.89■□□□□ 0.13
GABPB1-208ENST00000558970 MAP3K15Q6ZN16 1313 aa15.89■□□□□ 0.13
GABPB1-208ENST00000558970 GYS1P13807 737 aa15.88■□□□□ 0.13
GABPB1-208ENST00000558970 FKBP8Q14318 412 aa15.88■□□□□ 0.13
GABPB1-208ENST00000558970 ALDH1L2Q3SY69 923 aa15.88■□□□□ 0.13
GABPB1-208ENST00000558970 RIC3Q7Z5B4 369 aa15.88■□□□□ 0.13
GABPB1-208ENST00000558970 BCL2L12Q9HB09 334 aa15.88■□□□□ 0.13
GABPB1-208ENST00000558970 FAM177BA6PVY3 158 aa15.87■□□□□ 0.13
GABPB1-208ENST00000558970 GPTP24298 496 aa15.87■□□□□ 0.13
GABPB1-208ENST00000558970 ANKRD13DQ6ZTN6 518 aa15.87■□□□□ 0.13
GABPB1-208ENST00000558970 RCAN3Q9UKA8 241 aa15.87■□□□□ 0.13
GABPB1-208ENST00000558970 COL24A1Q17RW2 1714 aa15.86■□□□□ 0.13
GABPB1-208ENST00000558970 PI4KAP2A4QPH2 592 aa15.86■□□□□ 0.13
GABPB1-208ENST00000558970 F6X3S4 739 aa15.86■□□□□ 0.13
GABPB1-208ENST00000558970 DDX58O95786 925 aaKnown RBP15.86■□□□□ 0.13
GABPB1-208ENST00000558970 TBC1D9BQ66K14 1250 aa15.86■□□□□ 0.13
GABPB1-208ENST00000558970 PI4KAP1Q8N8J0 262 aa15.86■□□□□ 0.13
GABPB1-208ENST00000558970 NOB1Q9ULX3 412 aaKnown RBP15.86■□□□□ 0.13
GABPB1-208ENST00000558970 MAP3K2Q9Y2U5 619 aa15.86■□□□□ 0.13
GABPB1-208ENST00000558970 ADCY9O60503 1353 aa15.86■□□□□ 0.13
GABPB1-208ENST00000558970 ATP5J2-PTCD1G3V325 749 aa15.85■□□□□ 0.13
GABPB1-208ENST00000558970 SLC4A10Q6U841 1118 aa15.85■□□□□ 0.13
GABPB1-208ENST00000558970 PLBD2Q8NHP8 589 aa15.85■□□□□ 0.13
GABPB1-208ENST00000558970 MYD88Q99836 296 aa15.85■□□□□ 0.13
GABPB1-208ENST00000558970 ZNF652Q9Y2D9 606 aa15.85■□□□□ 0.13
GABPB1-208ENST00000558970 N4BP2Q86UW6 1770 aaPredicted RBP15.85■□□□□ 0.13
GABPB1-208ENST00000558970 MTFR1LQ9H019 292 aa15.84■□□□□ 0.13
GABPB1-208ENST00000558970 TNNQ9UQP3 1299 aa15.84■□□□□ 0.13
GABPB1-208ENST00000558970 NIP7Q9Y221 180 aaKnown RBP eCLIP15.84■□□□□ 0.13
GABPB1-208ENST00000558970 ERVV-1B6SEH8 477 aa15.83■□□□□ 0.12
GABPB1-208ENST00000558970 MMP10P09238 476 aa15.83■□□□□ 0.12
GABPB1-208ENST00000558970 NFIXQ14938 502 aa15.83■□□□□ 0.12
GABPB1-208ENST00000558970 KSR2Q6VAB6 950 aa15.83■□□□□ 0.12
GABPB1-208ENST00000558970 GIGYF2Q6Y7W6 1299 aaKnown RBP15.83■□□□□ 0.12
GABPB1-208ENST00000558970 SLC16A10Q8TF71 515 aa15.83■□□□□ 0.12
GABPB1-208ENST00000558970 KIF16BQ96L93 1317 aa15.83■□□□□ 0.12
GABPB1-208ENST00000558970 NPHP1O15259 732 aa15.82■□□□□ 0.12
GABPB1-208ENST00000558970 PTGER2P43116 358 aa15.82■□□□□ 0.12
GABPB1-208ENST00000558970 KLHL34Q8N239 644 aa15.82■□□□□ 0.12
GABPB1-208ENST00000558970 NLGN1Q8N2Q7 840 aa15.82■□□□□ 0.12
GABPB1-208ENST00000558970 CCDC24Q8N4L8 307 aa15.82■□□□□ 0.12
GABPB1-208ENST00000558970 CLUAP1Q96AJ1 413 aa15.82■□□□□ 0.12
GABPB1-208ENST00000558970 PLIN1O60240 522 aa15.81■□□□□ 0.12
GABPB1-208ENST00000558970 PTPRCP08575 1304 aa15.81■□□□□ 0.12
GABPB1-208ENST00000558970 DDR1Q08345 913 aa15.81■□□□□ 0.12
GABPB1-208ENST00000558970 CWF19L2Q2TBE0 894 aaKnown RBP15.81■□□□□ 0.12
GABPB1-208ENST00000558970 UBN2Q6ZU65 1347 aa15.81■□□□□ 0.12
GABPB1-208ENST00000558970 DNAAF4Q8WXU2 420 aa15.81■□□□□ 0.12
GABPB1-208ENST00000558970 SETDB2Q96T68 719 aa15.81■□□□□ 0.12
GABPB1-208ENST00000558970 PARP3Q9Y6F1 533 aa15.81■□□□□ 0.12
GABPB1-208ENST00000558970 NRXN2Q9P2S2 1712 aa15.8■□□□□ 0.12
GABPB1-208ENST00000558970 ATP10DQ9P241 1426 aa15.8■□□□□ 0.12
GABPB1-208ENST00000558970 CARMIL3Q8ND23 1372 aa15.8■□□□□ 0.12
GABPB1-208ENST00000558970 POLD1P28340 1107 aa15.8■□□□□ 0.12
GABPB1-208ENST00000558970 TCIRG1Q13488 830 aa15.8■□□□□ 0.12
GABPB1-208ENST00000558970 RTL5Q5HYW3 569 aaPredicted RBP15.8■□□□□ 0.12
GABPB1-208ENST00000558970 METTL22Q9BUU2 404 aaPredicted RBP15.8■□□□□ 0.12
GABPB1-208ENST00000558970 CACNA1SQ13698 1873 aa15.8■□□□□ 0.12
GABPB1-208ENST00000558970 ANKRD31Q8N7Z5 1873 aa15.8■□□□□ 0.12
GABPB1-208ENST00000558970 LAMB2P55268 1798 aa15.8■□□□□ 0.12
GABPB1-208ENST00000558970 NEXNQ0ZGT2 675 aa15.79■□□□□ 0.12
GABPB1-208ENST00000558970 HSP90AB3PQ58FF7 597 aa15.79■□□□□ 0.12
GABPB1-208ENST00000558970 CLEC4GQ6UXB4 293 aa15.79■□□□□ 0.12
GABPB1-208ENST00000558970 DDX60Q8IY21 1712 aaKnown RBP15.79■□□□□ 0.12
GABPB1-208ENST00000558970 POLRMTO00411 1230 aaKnown RBP15.78■□□□□ 0.12
GABPB1-208ENST00000558970 SERPINB2P05120 415 aa15.78■□□□□ 0.12
GABPB1-208ENST00000558970 TRIM27P14373 513 aa15.78■□□□□ 0.12
GABPB1-208ENST00000558970 TM4SF1P30408 202 aa15.78■□□□□ 0.12
GABPB1-208ENST00000558970 ZKSCAN2Q63HK3 967 aa15.78■□□□□ 0.12
GABPB1-208ENST00000558970 NBPF5PQ86XG9 351 aaPredicted RBP15.78■□□□□ 0.12
GABPB1-208ENST00000558970 ZNF34Q8IZ26 560 aa15.78■□□□□ 0.12
GABPB1-208ENST00000558970 JARID2Q92833 1246 aaPredicted RBP15.78■□□□□ 0.12
GABPB1-208ENST00000558970 TNRC6CQ9HCJ0 1690 aaKnown RBP15.78■□□□□ 0.12
GABPB1-208ENST00000558970 IGKV5-2P06315 115 aa15.77■□□□□ 0.12
GABPB1-208ENST00000558970 GTF2E1P29083 439 aaPredicted RBP15.77■□□□□ 0.12
GABPB1-208ENST00000558970 SUSD4Q5VX71 490 aa15.77■□□□□ 0.12
GABPB1-208ENST00000558970 ATF7IPQ6VMQ6 1270 aa15.77■□□□□ 0.12
GABPB1-208ENST00000558970 NUTM1Q86Y26 1132 aa15.77■□□□□ 0.12
GABPB1-208ENST00000558970 SGIP1Q9BQI5 828 aa15.77■□□□□ 0.12
GABPB1-208ENST00000558970 SYT17Q9BSW7 474 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms