RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 ANP32CO43423 234 aa28.52■■■□□ 2.16
CRNDE-203ENST00000557792 RBM46Q8TBY0 533 aaKnown RBP28.52■■■□□ 2.16
CRNDE-203ENST00000557792 C16orf71Q8IYS4 520 aaPredicted RBP28.51■■■□□ 2.15
CRNDE-203ENST00000557792 BABAM1Q9NWV8 329 aa28.5■■■□□ 2.15
CRNDE-203ENST00000557792 TNRC6CQ9HCJ0 1690 aaKnown RBP28.5■■■□□ 2.15
CRNDE-203ENST00000557792 CCDC88AQ3V6T2 1871 aa28.49■■■□□ 2.15
CRNDE-203ENST00000557792 APAF1O14727 1248 aa28.49■■■□□ 2.15
CRNDE-203ENST00000557792 CAMTA2O94983 1202 aa28.49■■■□□ 2.15
CRNDE-203ENST00000557792 DZIP3Q86Y13 1208 aaKnown RBP28.49■■■□□ 2.15
CRNDE-203ENST00000557792 RRAGCQ9HB90 399 aa28.49■■■□□ 2.15
CRNDE-203ENST00000557792 PRELPP51888 382 aa28.48■■■□□ 2.15
CRNDE-203ENST00000557792 ZC3H4Q9UPT8 1303 aaKnown RBP28.47■■■□□ 2.15
CRNDE-203ENST00000557792 LMNB1P20700 586 aa28.47■■■□□ 2.15
CRNDE-203ENST00000557792 PRR5LQ6MZQ0 368 aa28.47■■■□□ 2.15
CRNDE-203ENST00000557792 CHL1O00533 1208 aa28.46■■■□□ 2.15
CRNDE-203ENST00000557792 CCDC24Q8N4L8 307 aa28.46■■■□□ 2.15
CRNDE-203ENST00000557792 BRIP1Q9BX63 1249 aa28.46■■■□□ 2.15
CRNDE-203ENST00000557792 BCORQ6W2J9 1755 aa28.46■■■□□ 2.15
CRNDE-203ENST00000557792 KDM3BQ7LBC6 1761 aa28.46■■■□□ 2.15
CRNDE-203ENST00000557792 COL11A2P13942 1736 aaPredicted RBP28.46■■■□□ 2.15
CRNDE-203ENST00000557792 DNAJC5GQ8N7S2 189 aa28.45■■■□□ 2.14
CRNDE-203ENST00000557792 WDR90Q96KV7 1748 aa28.45■■■□□ 2.14
CRNDE-203ENST00000557792 PDE6BP35913 854 aa28.44■■■□□ 2.14
CRNDE-203ENST00000557792 FSTL1Q12841 308 aa28.44■■■□□ 2.14
CRNDE-203ENST00000557792 IFFO2Q5TF58 517 aa28.44■■■□□ 2.14
CRNDE-203ENST00000557792 ZNF622Q969S3 477 aaKnown RBP eCLIP28.44■■■□□ 2.14
CRNDE-203ENST00000557792 PDZRN3Q9UPQ7 1066 aa28.44■■■□□ 2.14
CRNDE-203ENST00000557792 LAS1LQ9Y4W2 734 aaKnown RBP28.44■■■□□ 2.14
CRNDE-203ENST00000557792 TIAM2Q8IVF5 1701 aa28.43■■■□□ 2.14
CRNDE-203ENST00000557792 NFKBIEO00221 500 aa28.43■■■□□ 2.14
CRNDE-203ENST00000557792 SETDB2Q96T68 719 aa28.43■■■□□ 2.14
CRNDE-203ENST00000557792 MRS2Q9HD23 443 aa28.42■■■□□ 2.14
CRNDE-203ENST00000557792 NGEFQ8N5V2 710 aa28.41■■■□□ 2.14
CRNDE-203ENST00000557792 CLEC4GQ6UXB4 293 aa28.4■■■□□ 2.14
CRNDE-203ENST00000557792 CNBD1Q8NA66 436 aa28.4■■■□□ 2.14
CRNDE-203ENST00000557792 GLTPD2A6NH11 291 aa28.39■■■□□ 2.14
CRNDE-203ENST00000557792 FER1L6Q2WGJ9 1857 aa28.39■■■□□ 2.14
CRNDE-203ENST00000557792 C21orf2O43822 256 aa28.38■■■□□ 2.13
CRNDE-203ENST00000557792 MYL6BP14649 208 aa28.38■■■□□ 2.13
CRNDE-203ENST00000557792 EIF2S2P20042 333 aaKnown RBP28.38■■■□□ 2.13
CRNDE-203ENST00000557792 ZNF219Q9P2Y4 722 aaPredicted RBP28.38■■■□□ 2.13
CRNDE-203ENST00000557792 NPHP1O15259 732 aa28.37■■■□□ 2.13
CRNDE-203ENST00000557792 HTRA3P83110 453 aa28.37■■■□□ 2.13
CRNDE-203ENST00000557792 KRT24Q2M2I5 525 aa28.37■■■□□ 2.13
CRNDE-203ENST00000557792 CFAP44Q96MT7 982 aa28.37■■■□□ 2.13
CRNDE-203ENST00000557792 CACNA1SQ13698 1873 aa28.37■■■□□ 2.13
CRNDE-203ENST00000557792 SLX4Q8IY92 1834 aa28.36■■■□□ 2.13
CRNDE-203ENST00000557792 DICER1Q9UPY3 1922 aaKnown RBP28.36■■■□□ 2.13
CRNDE-203ENST00000557792 ST5P78524 1137 aa28.36■■■□□ 2.13
CRNDE-203ENST00000557792 HLFQ16534 295 aa28.36■■■□□ 2.13
CRNDE-203ENST00000557792 ZNF652Q9Y2D9 606 aa28.36■■■□□ 2.13
CRNDE-203ENST00000557792 RGL2O15211 777 aa28.35■■■□□ 2.13
CRNDE-203ENST00000557792 VEGFAP15692 232 aaPredicted RBP28.35■■■□□ 2.13
CRNDE-203ENST00000557792 TTLL7Q6ZT98 887 aa28.35■■■□□ 2.13
CRNDE-203ENST00000557792 SMC1BQ8NDV3 1235 aa28.35■■■□□ 2.13
CRNDE-203ENST00000557792 ERBB4Q15303 1308 aa28.35■■■□□ 2.13
CRNDE-203ENST00000557792 ZNF853P0CG23 659 aa28.34■■■□□ 2.13
CRNDE-203ENST00000557792 PDIA6Q15084 440 aa28.34■■■□□ 2.13
CRNDE-203ENST00000557792 STYK1Q6J9G0 422 aa28.34■■■□□ 2.13
CRNDE-203ENST00000557792 ARFGEF2Q9Y6D5 1785 aa28.33■■■□□ 2.13
CRNDE-203ENST00000557792 SRGNP10124 158 aa28.33■■■□□ 2.13
CRNDE-203ENST00000557792 CNKSR1Q969H4 720 aa28.33■■■□□ 2.13
CRNDE-203ENST00000557792 LAMB4A4D0S4 1761 aa28.32■■■□□ 2.12
CRNDE-203ENST00000557792 ERVV-1B6SEH8 477 aa28.32■■■□□ 2.12
CRNDE-203ENST00000557792 LRP10Q7Z4F1 713 aa28.32■■■□□ 2.12
CRNDE-203ENST00000557792 NBPF5PQ86XG9 351 aaPredicted RBP28.32■■■□□ 2.12
CRNDE-203ENST00000557792 NECTIN2Q92692 538 aa28.32■■■□□ 2.12
CRNDE-203ENST00000557792 MBIPQ9NS73 344 aa28.32■■■□□ 2.12
CRNDE-203ENST00000557792 PROSER3Q2NL68 480 aa28.31■■■□□ 2.12
CRNDE-203ENST00000557792 PRPF40BQ6NWY9 871 aaKnown RBP28.31■■■□□ 2.12
CRNDE-203ENST00000557792 MASTLQ96GX5 879 aa28.31■■■□□ 2.12
CRNDE-203ENST00000557792 NIP7Q9Y221 180 aaKnown RBP eCLIP28.31■■■□□ 2.12
CRNDE-203ENST00000557792 MAP3K15Q6ZN16 1313 aa28.3■■■□□ 2.12
CRNDE-203ENST00000557792 ANXA1P04083 346 aa28.3■■■□□ 2.12
CRNDE-203ENST00000557792 CALD1Q05682 793 aaKnown RBP28.3■■■□□ 2.12
CRNDE-203ENST00000557792 ERFEQ4G0M1 354 aa28.3■■■□□ 2.12
CRNDE-203ENST00000557792 KLRG1Q96E93 195 aa28.3■■■□□ 2.12
CRNDE-203ENST00000557792 IFT57Q9NWB7 429 aa28.3■■■□□ 2.12
CRNDE-203ENST00000557792 LTBP3Q9NS15 1303 aa28.29■■■□□ 2.12
CRNDE-203ENST00000557792 KIF6Q6ZMV9 814 aa28.29■■■□□ 2.12
CRNDE-203ENST00000557792 TAOK3Q9H2K8 898 aa28.29■■■□□ 2.12
CRNDE-203ENST00000557792 POTECB2RU33 542 aa28.28■■■□□ 2.12
CRNDE-203ENST00000557792 GNAI1P63096 354 aa28.28■■■□□ 2.12
CRNDE-203ENST00000557792 DPY19L2Q6NUT2 758 aa28.28■■■□□ 2.12
CRNDE-203ENST00000557792 ZBTB3Q9H5J0 574 aa28.28■■■□□ 2.12
CRNDE-203ENST00000557792 DUSP27Q5VZP5 1158 aa28.26■■■□□ 2.11
CRNDE-203ENST00000557792 FAM177BA6PVY3 158 aa28.25■■■□□ 2.11
CRNDE-203ENST00000557792 HOXB7P09629 217 aa28.25■■■□□ 2.11
CRNDE-203ENST00000557792 CCDC27Q2M243 656 aa28.25■■■□□ 2.11
CRNDE-203ENST00000557792 SOGA3Q5TF21 947 aa28.25■■■□□ 2.11
CRNDE-203ENST00000557792 TPTE2Q6XPS3 522 aa28.25■■■□□ 2.11
CRNDE-203ENST00000557792 WWC1Q8IX03 1113 aa28.24■■■□□ 2.11
CRNDE-203ENST00000557792 DDX21Q9NR30 783 aaKnown RBP eCLIP28.24■■■□□ 2.11
CRNDE-203ENST00000557792 PCNTO95613 3336 aa28.24■■■□□ 2.11
CRNDE-203ENST00000557792 KLRG2A4D1S0 409 aaPredicted RBP28.23■■■□□ 2.11
CRNDE-203ENST00000557792 NPR1P16066 1061 aa28.23■■■□□ 2.11
CRNDE-203ENST00000557792 HDGFL1Q5TGJ6 251 aa28.23■■■□□ 2.11
CRNDE-203ENST00000557792 COPS6Q7L5N1 327 aa28.23■■■□□ 2.11
CRNDE-203ENST00000557792 JMYQ8N9B5 988 aa28.23■■■□□ 2.11
CRNDE-203ENST00000557792 GIGYF2Q6Y7W6 1299 aaKnown RBP28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms