RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 HMGB2P26583 209 aaKnown RBP11.69□□□□□ -0.54
CHD8-210ENST00000555962 GNAI1P63096 354 aa11.69□□□□□ -0.54
CHD8-210ENST00000555962 CALD1Q05682 793 aaKnown RBP11.69□□□□□ -0.54
CHD8-210ENST00000555962 TEX13AQ9BXU3 409 aaPredicted RBP11.69□□□□□ -0.54
CHD8-210ENST00000555962 CCDC87Q9NVE4 849 aa11.69□□□□□ -0.54
CHD8-210ENST00000555962 ZBTB1Q9Y2K1 713 aa11.69□□□□□ -0.54
CHD8-210ENST00000555962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.68□□□□□ -0.54
CHD8-210ENST00000555962 RPS6KA4O75676 772 aa11.68□□□□□ -0.54
CHD8-210ENST00000555962 STARD3NLO95772 234 aa11.68□□□□□ -0.54
CHD8-210ENST00000555962 A1BGP04217 495 aa11.68□□□□□ -0.54
CHD8-210ENST00000555962 PIP4K2AP48426 406 aaPredicted RBP11.68□□□□□ -0.54
CHD8-210ENST00000555962 NGEFQ8N5V2 710 aa11.68□□□□□ -0.54
CHD8-210ENST00000555962 TSR2Q969E8 191 aaKnown RBP11.68□□□□□ -0.54
CHD8-210ENST00000555962 BCORQ6W2J9 1755 aa11.68□□□□□ -0.54
CHD8-210ENST00000555962 LRP5O75197 1615 aa11.68□□□□□ -0.54
CHD8-210ENST00000555962 SOS1Q07889 1333 aaPredicted RBP11.67□□□□□ -0.54
CHD8-210ENST00000555962 IL16Q14005 1332 aa11.67□□□□□ -0.54
CHD8-210ENST00000555962 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
CHD8-210ENST00000555962 SSFA2P28290 1259 aa11.67□□□□□ -0.54
CHD8-210ENST00000555962 WDR63Q8IWG1 891 aa11.67□□□□□ -0.54
CHD8-210ENST00000555962 RTCBQ9Y3I0 505 aaKnown RBP11.67□□□□□ -0.54
CHD8-210ENST00000555962 SCN7AQ01118 1682 aa11.67□□□□□ -0.54
CHD8-210ENST00000555962 CACNA1FO60840 1977 aa11.67□□□□□ -0.54
CHD8-210ENST00000555962 SRCAPQ6ZRS2 3230 aa11.66□□□□□ -0.54
CHD8-210ENST00000555962 NUP98P52948 1817 aa11.66□□□□□ -0.54
CHD8-210ENST00000555962 NBPF26B4DH59 902 aa11.66□□□□□ -0.54
CHD8-210ENST00000555962 ZBTB7AO95365 584 aa11.66□□□□□ -0.54
CHD8-210ENST00000555962 NBPF10Q6P3W6 841 aaKnown RBP11.66□□□□□ -0.54
CHD8-210ENST00000555962 NBPF15Q8N660 670 aa11.66□□□□□ -0.54
CHD8-210ENST00000555962 FLAD1Q8NFF5 587 aa11.66□□□□□ -0.54
CHD8-210ENST00000555962 ARHGEF1Q92888 912 aaKnown RBP11.66□□□□□ -0.54
CHD8-210ENST00000555962 COL15A1P39059 1388 aa11.66□□□□□ -0.54
CHD8-210ENST00000555962 EIF5P55010 431 aaKnown RBP11.65□□□□□ -0.54
CHD8-210ENST00000555962 TRAPPC3LQ5T215 181 aa11.65□□□□□ -0.54
CHD8-210ENST00000555962 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.65□□□□□ -0.54
CHD8-210ENST00000555962 C8orf58Q8NAV2 365 aa11.65□□□□□ -0.54
CHD8-210ENST00000555962 FANCIQ9NVI1 1328 aa11.64□□□□□ -0.55
CHD8-210ENST00000555962 EIF2S2P20042 333 aaKnown RBP11.64□□□□□ -0.55
CHD8-210ENST00000555962 IL6STP40189 918 aaPredicted RBP11.64□□□□□ -0.55
CHD8-210ENST00000555962 DUSP27Q5VZP5 1158 aa11.64□□□□□ -0.55
CHD8-210ENST00000555962 TSPYL6Q8N831 410 aa11.64□□□□□ -0.55
CHD8-210ENST00000555962 SLC16A10Q8TF71 515 aa11.64□□□□□ -0.55
CHD8-210ENST00000555962 SRP68Q9UHB9 627 aaKnown RBP11.64□□□□□ -0.55
CHD8-210ENST00000555962 AFDNP55196 1824 aaKnown RBP11.64□□□□□ -0.55
CHD8-210ENST00000555962 ELL2O00472 640 aaPredicted RBP11.63□□□□□ -0.55
CHD8-210ENST00000555962 MSL1Q68DK7 614 aa11.63□□□□□ -0.55
CHD8-210ENST00000555962 IFNL1Q8IU54 200 aa11.63□□□□□ -0.55
CHD8-210ENST00000555962 NECTIN2Q92692 538 aa11.63□□□□□ -0.55
CHD8-210ENST00000555962 MTFR1LQ9H019 292 aa11.63□□□□□ -0.55
CHD8-210ENST00000555962 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
CHD8-210ENST00000555962 PPP1R37O75864 691 aa11.62□□□□□ -0.55
CHD8-210ENST00000555962 ANXA1P04083 346 aa11.62□□□□□ -0.55
CHD8-210ENST00000555962 HOXB7P09629 217 aa11.62□□□□□ -0.55
CHD8-210ENST00000555962 RFC4P35249 363 aa11.62□□□□□ -0.55
CHD8-210ENST00000555962 PTGER2P43116 358 aa11.62□□□□□ -0.55
CHD8-210ENST00000555962 HNRNPUQ00839 825 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHD8-210ENST00000555962 GOLGA2Q08379 1002 aa11.62□□□□□ -0.55
CHD8-210ENST00000555962 PDIA6Q15084 440 aa11.62□□□□□ -0.55
CHD8-210ENST00000555962 PROSER3Q2NL68 480 aa11.62□□□□□ -0.55
CHD8-210ENST00000555962 EFCAB3Q8N7B9 438 aa11.62□□□□□ -0.55
CHD8-210ENST00000555962 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
CHD8-210ENST00000555962 ZNF330Q9Y3S2 320 aaPredicted RBP11.62□□□□□ -0.55
CHD8-210ENST00000555962 ANKRD36CQ5JPF3 1778 aa11.62□□□□□ -0.55
CHD8-210ENST00000555962 USP42Q9H9J4 1324 aaKnown RBP11.61□□□□□ -0.55
CHD8-210ENST00000555962 GYS1P13807 737 aa11.61□□□□□ -0.55
CHD8-210ENST00000555962 MYL6BP14649 208 aa11.61□□□□□ -0.55
CHD8-210ENST00000555962 EXOSC9Q06265 439 aaKnown RBP11.61□□□□□ -0.55
CHD8-210ENST00000555962 SLFN5Q08AF3 891 aa11.61□□□□□ -0.55
CHD8-210ENST00000555962 USPL1Q5W0Q7 1092 aa11.61□□□□□ -0.55
CHD8-210ENST00000555962 LRP10Q7Z4F1 713 aa11.61□□□□□ -0.55
CHD8-210ENST00000555962 BCL2L12Q9HB09 334 aa11.61□□□□□ -0.55
CHD8-210ENST00000555962 SPON1Q9HCB6 807 aa11.61□□□□□ -0.55
CHD8-210ENST00000555962 NARFQ9UHQ1 456 aa11.61□□□□□ -0.55
CHD8-210ENST00000555962 TBC1D2BQ9UPU7 963 aa11.61□□□□□ -0.55
CHD8-210ENST00000555962 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
CHD8-210ENST00000555962 ERBB4Q15303 1308 aa11.6□□□□□ -0.55
CHD8-210ENST00000555962 ARFGEF2Q9Y6D5 1785 aa11.6□□□□□ -0.55
CHD8-210ENST00000555962 HDGFL1Q5TGJ6 251 aa11.6□□□□□ -0.55
CHD8-210ENST00000555962 FBXO22Q8NEZ5 403 aa11.6□□□□□ -0.55
CHD8-210ENST00000555962 MYH16Q9H6N6 1097 aa11.6□□□□□ -0.55
CHD8-210ENST00000555962 CHPF2Q9P2E5 772 aa11.6□□□□□ -0.55
CHD8-210ENST00000555962 KIF13BQ9NQT8 1826 aa11.59□□□□□ -0.55
CHD8-210ENST00000555962 A0A087WZG4 1122 aa11.59□□□□□ -0.55
CHD8-210ENST00000555962 E9PSI1 815 aa11.59□□□□□ -0.55
CHD8-210ENST00000555962 MAP3K13O43283 966 aa11.59□□□□□ -0.55
CHD8-210ENST00000555962 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.557e-7■■■■□ 24.8
CHD8-210ENST00000555962 TWISTNBQ3B726 338 aaPredicted RBP11.59□□□□□ -0.55
CHD8-210ENST00000555962 TTLL7Q6ZT98 887 aa11.59□□□□□ -0.55
CHD8-210ENST00000555962 DZIP3Q86Y13 1208 aaKnown RBP11.59□□□□□ -0.55
CHD8-210ENST00000555962 DDX21Q9NR30 783 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHD8-210ENST00000555962 NRXN2Q9P2S2 1712 aa11.59□□□□□ -0.55
CHD8-210ENST00000555962 TCERG1O14776 1098 aaKnown RBP11.58□□□□□ -0.56
CHD8-210ENST00000555962 ZPR1O75312 459 aa11.58□□□□□ -0.56
CHD8-210ENST00000555962 VAMP4O75379 141 aa11.58□□□□□ -0.56
CHD8-210ENST00000555962 CAMTA2O94983 1202 aa11.58□□□□□ -0.56
CHD8-210ENST00000555962 TMEM132AQ24JP5 1023 aa11.58□□□□□ -0.56
CHD8-210ENST00000555962 TRMT2AQ8IZ69 625 aaKnown RBP11.58□□□□□ -0.56
CHD8-210ENST00000555962 ARXQ96QS3 562 aa11.58□□□□□ -0.56
CHD8-210ENST00000555962 E2F4Q16254 413 aa11.57□□□□□ -0.56
CHD8-210ENST00000555962 NPM2Q86SE8 214 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms