RNA–Protein interactions for RNA: ENST00000555137.5

HNRNPC-216, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-216ENST00000555137 DZIP3Q86Y13 1208 aaKnown RBP12.96□□□□□ -0.33
HNRNPC-216ENST00000555137 POTEIP0CG38 1075 aa12.95□□□□□ -0.34
HNRNPC-216ENST00000555137 POTEJP0CG39 1038 aa12.95□□□□□ -0.34
HNRNPC-216ENST00000555137 MCM10Q7L590 875 aa12.95□□□□□ -0.34
HNRNPC-216ENST00000555137 SETDB2Q96T68 719 aa12.95□□□□□ -0.34
HNRNPC-216ENST00000555137 TAOK3Q9H2K8 898 aa12.95□□□□□ -0.34
HNRNPC-216ENST00000555137 PDZRN3Q9UPQ7 1066 aa12.95□□□□□ -0.34
HNRNPC-216ENST00000555137 STYK1Q6J9G0 422 aa12.94□□□□□ -0.34
HNRNPC-216ENST00000555137 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
HNRNPC-216ENST00000555137 DDNO94850 711 aaPredicted RBP12.93□□□□□ -0.34
HNRNPC-216ENST00000555137 ST5P78524 1137 aa12.93□□□□□ -0.34
HNRNPC-216ENST00000555137 DCTN1Q14203 1278 aa12.93□□□□□ -0.34
HNRNPC-216ENST00000555137 DPY19L2Q6NUT2 758 aa12.93□□□□□ -0.34
HNRNPC-216ENST00000555137 NBPF10Q6P3W6 841 aaKnown RBP12.93□□□□□ -0.34
HNRNPC-216ENST00000555137 NBPF15Q8N660 670 aa12.93□□□□□ -0.34
HNRNPC-216ENST00000555137 C7orf43Q8WVR3 580 aa12.93□□□□□ -0.34
HNRNPC-216ENST00000555137 CNKSR1Q969H4 720 aa12.93□□□□□ -0.34
HNRNPC-216ENST00000555137 NPHP1O15259 732 aa12.92□□□□□ -0.34
HNRNPC-216ENST00000555137 HSPA1AP0DMV8 641 aaKnown RBP12.92□□□□□ -0.34
HNRNPC-216ENST00000555137 HSPA1BP0DMV9 641 aaKnown RBP12.92□□□□□ -0.34
HNRNPC-216ENST00000555137 OLFM4Q6UX06 510 aa12.92□□□□□ -0.34
HNRNPC-216ENST00000555137 MASTLQ96GX5 879 aa12.92□□□□□ -0.34
HNRNPC-216ENST00000555137 CAPN15O75808 1086 aa12.91□□□□□ -0.34
HNRNPC-216ENST00000555137 SNRPA1P09661 255 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-216ENST00000555137 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
HNRNPC-216ENST00000555137 PPP2R1AP30153 589 aa12.91□□□□□ -0.34
HNRNPC-216ENST00000555137 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.346e-11■■□□□ 14.2
HNRNPC-216ENST00000555137 NPM2Q86SE8 214 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-216ENST00000555137 NBPF5PQ86XG9 351 aaPredicted RBP12.91□□□□□ -0.34
HNRNPC-216ENST00000555137 CFAP53Q96M91 514 aa12.91□□□□□ -0.34
HNRNPC-216ENST00000555137 KLRG2A4D1S0 409 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-216ENST00000555137 CHADLQ6NUI6 762 aa12.9□□□□□ -0.34
HNRNPC-216ENST00000555137 CLEC4GQ6UXB4 293 aa12.9□□□□□ -0.34
HNRNPC-216ENST00000555137 TNS4Q8IZW8 715 aa12.9□□□□□ -0.34
HNRNPC-216ENST00000555137 ZNF541Q9H0D2 1346 aa12.89□□□□□ -0.35
HNRNPC-216ENST00000555137 LAMB4A4D0S4 1761 aa12.89□□□□□ -0.35
HNRNPC-216ENST00000555137 NIP7Q9Y221 180 aaKnown RBP eCLIP12.89□□□□□ -0.35
HNRNPC-216ENST00000555137 SNED1Q8TER0 1413 aa12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 FAM177BA6PVY3 158 aa12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 NPR1P16066 1061 aa12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 HLFQ16534 295 aa12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 CCDC93Q567U6 631 aa12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 RTF1Q92541 710 aaKnown RBP12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 L3MBTL3Q96JM7 780 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 ZNF277Q9NRM2 450 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 MIS18AQ9NYP9 233 aa12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 ZNF652Q9Y2D9 606 aa12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 ABCC12Q96J65 1359 aa12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 SCN4AP35499 1836 aa12.88□□□□□ -0.35
HNRNPC-216ENST00000555137 KDM3BQ7LBC6 1761 aa12.87□□□□□ -0.35
HNRNPC-216ENST00000555137 FKBP4Q02790 459 aaKnown RBP eCLIP12.87□□□□□ -0.35
HNRNPC-216ENST00000555137 TAF1DQ9H5J8 278 aaPredicted RBP12.87□□□□□ -0.35
HNRNPC-216ENST00000555137 DLG5Q8TDM6 1919 aa12.87□□□□□ -0.35
HNRNPC-216ENST00000555137 PASKQ96RG2 1323 aa12.87□□□□□ -0.35
HNRNPC-216ENST00000555137 ADAMTSL1Q8N6G6 1762 aa12.86□□□□□ -0.35
HNRNPC-216ENST00000555137 COL4A5P29400 1685 aa12.86□□□□□ -0.35
HNRNPC-216ENST00000555137 SLC51AQ86UW1 340 aa12.86□□□□□ -0.35
HNRNPC-216ENST00000555137 IQCA1LA6NCM1 817 aa12.85□□□□□ -0.35
HNRNPC-216ENST00000555137 RGL2O15211 777 aa12.85□□□□□ -0.35
HNRNPC-216ENST00000555137 HTATSF1O43719 755 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-216ENST00000555137 TAF7Q15545 349 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-216ENST00000555137 TPTE2Q6XPS3 522 aa12.85□□□□□ -0.35
HNRNPC-216ENST00000555137 LDHDQ86WU2 507 aa12.85□□□□□ -0.35
HNRNPC-216ENST00000555137 CNTNAP1P78357 1384 aa12.84□□□□□ -0.35
HNRNPC-216ENST00000555137 NUP98P52948 1817 aa12.84□□□□□ -0.35
HNRNPC-216ENST00000555137 ITGBL1O95965 494 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-216ENST00000555137 NUTM1Q86Y26 1132 aa12.84□□□□□ -0.35
HNRNPC-216ENST00000555137 THUMPD2Q9BTF0 503 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-216ENST00000555137 IARSP41252 1262 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-216ENST00000555137 CRY2Q49AN0 593 aa12.83□□□□□ -0.36
HNRNPC-216ENST00000555137 EAPPQ56P03 285 aaPredicted RBP12.83□□□□□ -0.36
HNRNPC-216ENST00000555137 TTLL7Q6ZT98 887 aa12.83□□□□□ -0.36
HNRNPC-216ENST00000555137 RTKN2Q8IZC4 609 aa12.83□□□□□ -0.36
HNRNPC-216ENST00000555137 NGEFQ8N5V2 710 aa12.83□□□□□ -0.36
HNRNPC-216ENST00000555137 RNF123Q5XPI4 1314 aa12.83□□□□□ -0.36
HNRNPC-216ENST00000555137 UBN2Q6ZU65 1347 aa12.83□□□□□ -0.36
HNRNPC-216ENST00000555137 LTBP1Q14766 1721 aa12.82□□□□□ -0.36
HNRNPC-216ENST00000555137 FZD9O00144 591 aa12.82□□□□□ -0.36
HNRNPC-216ENST00000555137 FOXN1O15353 648 aa12.82□□□□□ -0.36
HNRNPC-216ENST00000555137 SYNE4Q8N205 404 aa12.82□□□□□ -0.36
HNRNPC-216ENST00000555137 HACL1Q9UJ83 578 aa12.82□□□□□ -0.36
HNRNPC-216ENST00000555137 MAP3K15Q6ZN16 1313 aa12.82□□□□□ -0.36
HNRNPC-216ENST00000555137 GPTP24298 496 aa12.81□□□□□ -0.36
HNRNPC-216ENST00000555137 EPHX2P34913 555 aa12.81□□□□□ -0.36
HNRNPC-216ENST00000555137 EIF4A1P60842 406 aaKnown RBP12.81□□□□□ -0.36
HNRNPC-216ENST00000555137 MAP1SQ66K74 1059 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-216ENST00000555137 C3orf67Q6ZVT6 689 aa12.81□□□□□ -0.36
HNRNPC-216ENST00000555137 PLEKHF1Q96S99 279 aa12.81□□□□□ -0.36
HNRNPC-216ENST00000555137 RRP7AQ9Y3A4 280 aaKnown RBP12.81□□□□□ -0.36
HNRNPC-216ENST00000555137 RIC1Q4ADV7 1423 aa12.8□□□□□ -0.36
HNRNPC-216ENST00000555137 TMEM88BA6NKF7 163 aa12.8□□□□□ -0.36
HNRNPC-216ENST00000555137 ERVV-1B6SEH8 477 aa12.8□□□□□ -0.36
HNRNPC-216ENST00000555137 MYL6BP14649 208 aa12.8□□□□□ -0.36
HNRNPC-216ENST00000555137 GTF2E1P29083 439 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-216ENST00000555137 ALDH1B1P30837 517 aa12.8□□□□□ -0.36
HNRNPC-216ENST00000555137 VEGFBP49765 207 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms