RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 C21orf2O43822 256 aa16.29■□□□□ 0.2
MTHFD1-207ENST00000554677 SRGNP10124 158 aa16.29■□□□□ 0.2
MTHFD1-207ENST00000554677 FSTL1Q12841 308 aa16.29■□□□□ 0.2
MTHFD1-207ENST00000554677 TAF7Q15545 349 aaPredicted RBP16.29■□□□□ 0.2
MTHFD1-207ENST00000554677 CLEC4GQ6UXB4 293 aa16.29■□□□□ 0.2
MTHFD1-207ENST00000554677 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
MTHFD1-207ENST00000554677 PLEKHF1Q96S99 279 aa16.29■□□□□ 0.2
MTHFD1-207ENST00000554677 MIS18AQ9NYP9 233 aa16.29■□□□□ 0.2
MTHFD1-207ENST00000554677 PCNTO95613 3336 aa16.29■□□□□ 0.2
MTHFD1-207ENST00000554677 POTECB2RU33 542 aa16.28■□□□□ 0.2
MTHFD1-207ENST00000554677 HTRA3P83110 453 aa16.28■□□□□ 0.2
MTHFD1-207ENST00000554677 IFFO2Q5TF58 517 aa16.28■□□□□ 0.2
MTHFD1-207ENST00000554677 CNBD1Q8NA66 436 aa16.28■□□□□ 0.2
MTHFD1-207ENST00000554677 ARFGEF2Q9Y6D5 1785 aa16.28■□□□□ 0.2
MTHFD1-207ENST00000554677 STYK1Q6J9G0 422 aa16.27■□□□□ 0.2
MTHFD1-207ENST00000554677 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.2
MTHFD1-207ENST00000554677 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.2
MTHFD1-207ENST00000554677 C7orf43Q8WVR3 580 aa16.26■□□□□ 0.19
MTHFD1-207ENST00000554677 NUP98P52948 1817 aa16.26■□□□□ 0.19
MTHFD1-207ENST00000554677 KDM3BQ7LBC6 1761 aa16.26■□□□□ 0.19
MTHFD1-207ENST00000554677 KLRG2A4D1S0 409 aaPredicted RBP16.25■□□□□ 0.19
MTHFD1-207ENST00000554677 VEGFAP15692 232 aaPredicted RBP16.25■□□□□ 0.19
MTHFD1-207ENST00000554677 HLFQ16534 295 aa16.25■□□□□ 0.19
MTHFD1-207ENST00000554677 CNKSR1Q969H4 720 aa16.25■□□□□ 0.19
MTHFD1-207ENST00000554677 MASTLQ96GX5 879 aa16.25■□□□□ 0.19
MTHFD1-207ENST00000554677 LTBP3Q9NS15 1303 aa16.24■□□□□ 0.19
MTHFD1-207ENST00000554677 LAMB4A4D0S4 1761 aa16.24■□□□□ 0.19
MTHFD1-207ENST00000554677 RGL2O15211 777 aa16.24■□□□□ 0.19
MTHFD1-207ENST00000554677 ST5P78524 1137 aa16.24■□□□□ 0.19
MTHFD1-207ENST00000554677 PRPF40BQ6NWY9 871 aaKnown RBP16.24■□□□□ 0.19
MTHFD1-207ENST00000554677 NBPF5PQ86XG9 351 aaPredicted RBP16.24■□□□□ 0.19
MTHFD1-207ENST00000554677 SMC1BQ8NDV3 1235 aa16.23■□□□□ 0.19
MTHFD1-207ENST00000554677 THUMPD2Q9BTF0 503 aaKnown RBP16.23■□□□□ 0.19
MTHFD1-207ENST00000554677 EIF4A1P60842 406 aaKnown RBP16.22■□□□□ 0.19
MTHFD1-207ENST00000554677 NFE2L2Q16236 605 aa16.22■□□□□ 0.19
MTHFD1-207ENST00000554677 ERFEQ4G0M1 354 aa16.22■□□□□ 0.19
MTHFD1-207ENST00000554677 KLRG1Q96E93 195 aa16.22■□□□□ 0.19
MTHFD1-207ENST00000554677 NIP7Q9Y221 180 aaKnown RBP eCLIP16.22■□□□□ 0.19
MTHFD1-207ENST00000554677 ZNF652Q9Y2D9 606 aa16.22■□□□□ 0.19
MTHFD1-207ENST00000554677 NPHP1O15259 732 aa16.21■□□□□ 0.19
MTHFD1-207ENST00000554677 TPTE2Q6XPS3 522 aa16.21■□□□□ 0.19
MTHFD1-207ENST00000554677 TAOK3Q9H2K8 898 aa16.21■□□□□ 0.19
MTHFD1-207ENST00000554677 NPR1P16066 1061 aa16.2■□□□□ 0.18
MTHFD1-207ENST00000554677 DPY19L2Q6NUT2 758 aa16.2■□□□□ 0.18
MTHFD1-207ENST00000554677 JMYQ8N9B5 988 aa16.2■□□□□ 0.18
MTHFD1-207ENST00000554677 PNISRQ8TF01 805 aaKnown RBP16.2■□□□□ 0.18
MTHFD1-207ENST00000554677 FAM177BA6PVY3 158 aa16.19■□□□□ 0.18
MTHFD1-207ENST00000554677 OLFM4Q6UX06 510 aa16.19■□□□□ 0.18
MTHFD1-207ENST00000554677 TTLL7Q6ZT98 887 aa16.19■□□□□ 0.18
MTHFD1-207ENST00000554677 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
MTHFD1-207ENST00000554677 ERVV-1B6SEH8 477 aa16.18■□□□□ 0.18
MTHFD1-207ENST00000554677 DDNO94850 711 aaPredicted RBP16.18■□□□□ 0.18
MTHFD1-207ENST00000554677 SOGA3Q5TF21 947 aa16.18■□□□□ 0.18
MTHFD1-207ENST00000554677 NEFMP07197 916 aa16.17■□□□□ 0.18
MTHFD1-207ENST00000554677 RRP7AQ9Y3A4 280 aaKnown RBP16.17■□□□□ 0.18
MTHFD1-207ENST00000554677 MAP3K15Q6ZN16 1313 aa16.17■□□□□ 0.18
MTHFD1-207ENST00000554677 LRP10Q7Z4F1 713 aa16.16■□□□□ 0.18
MTHFD1-207ENST00000554677 POTEIP0CG38 1075 aa16.15■□□□□ 0.18
MTHFD1-207ENST00000554677 POTEJP0CG39 1038 aa16.15■□□□□ 0.18
MTHFD1-207ENST00000554677 MYL6BP14649 208 aa16.15■□□□□ 0.18
MTHFD1-207ENST00000554677 FKBP4Q02790 459 aaKnown RBP eCLIP16.15■□□□□ 0.18
MTHFD1-207ENST00000554677 CRY2Q49AN0 593 aa16.15■□□□□ 0.18
MTHFD1-207ENST00000554677 CCDC93Q567U6 631 aa16.15■□□□□ 0.18
MTHFD1-207ENST00000554677 NUTM1Q86Y26 1132 aa16.15■□□□□ 0.18
MTHFD1-207ENST00000554677 PNNQ9H307 717 aaKnown RBP16.15■□□□□ 0.18
MTHFD1-207ENST00000554677 UBN2Q6ZU65 1347 aa16.15■□□□□ 0.18
MTHFD1-207ENST00000554677 SCN4AP35499 1836 aa16.15■□□□□ 0.18
MTHFD1-207ENST00000554677 ABCC12Q96J65 1359 aa16.14■□□□□ 0.17
MTHFD1-207ENST00000554677 SNED1Q8TER0 1413 aa16.14■□□□□ 0.17
MTHFD1-207ENST00000554677 PDIA6Q15084 440 aa16.14■□□□□ 0.17
MTHFD1-207ENST00000554677 ZNF34Q8IZ26 560 aa16.14■□□□□ 0.17
MTHFD1-207ENST00000554677 ZNF277Q9NRM2 450 aaPredicted RBP16.14■□□□□ 0.17
MTHFD1-207ENST00000554677 ALDH1B1P30837 517 aa16.13■□□□□ 0.17
MTHFD1-207ENST00000554677 RIPK4P57078 832 aa16.13■□□□□ 0.17
MTHFD1-207ENST00000554677 RALBP1Q15311 655 aa16.13■□□□□ 0.17
MTHFD1-207ENST00000554677 SUSD4Q5VX71 490 aa16.13■□□□□ 0.17
MTHFD1-207ENST00000554677 L3MBTL3Q96JM7 780 aaPredicted RBP16.13■□□□□ 0.17
MTHFD1-207ENST00000554677 GPTP24298 496 aa16.12■□□□□ 0.17
MTHFD1-207ENST00000554677 GTF2E1P29083 439 aaPredicted RBP16.12■□□□□ 0.17
MTHFD1-207ENST00000554677 TMPOP42166 694 aaKnown RBP16.12■□□□□ 0.17
MTHFD1-207ENST00000554677 GIGYF2Q6Y7W6 1299 aaKnown RBP16.12■□□□□ 0.17
MTHFD1-207ENST00000554677 RTKN2Q8IZC4 609 aa16.12■□□□□ 0.17
MTHFD1-207ENST00000554677 SYNE4Q8N205 404 aa16.12■□□□□ 0.17
MTHFD1-207ENST00000554677 NYXQ9GZU5 481 aa16.12■□□□□ 0.17
MTHFD1-207ENST00000554677 ZBTB3Q9H5J0 574 aa16.12■□□□□ 0.17
MTHFD1-207ENST00000554677 MAPK8IP3Q9UPT6 1336 aa16.12■□□□□ 0.17
MTHFD1-207ENST00000554677 HOXA10P31260 410 aaPredicted RBP16.11■□□□□ 0.17
MTHFD1-207ENST00000554677 CHADLQ6NUI6 762 aa16.11■□□□□ 0.17
MTHFD1-207ENST00000554677 KIF6Q6ZMV9 814 aa16.11■□□□□ 0.17
MTHFD1-207ENST00000554677 SLC51AQ86UW1 340 aa16.11■□□□□ 0.17
MTHFD1-207ENST00000554677 TSPYL4Q9UJ04 414 aa16.11■□□□□ 0.17
MTHFD1-207ENST00000554677 ERBB4Q15303 1308 aa16.11■□□□□ 0.17
MTHFD1-207ENST00000554677 ZNF541Q9H0D2 1346 aa16.11■□□□□ 0.17
MTHFD1-207ENST00000554677 FZD9O00144 591 aa16.1■□□□□ 0.17
MTHFD1-207ENST00000554677 NTSR2O95665 410 aa16.1■□□□□ 0.17
MTHFD1-207ENST00000554677 PROSER3Q2NL68 480 aa16.1■□□□□ 0.17
MTHFD1-207ENST00000554677 C3orf67Q6ZVT6 689 aa16.1■□□□□ 0.17
MTHFD1-207ENST00000554677 TAF1DQ9H5J8 278 aaPredicted RBP16.1■□□□□ 0.17
MTHFD1-207ENST00000554677 BABAM1Q9NWV8 329 aa16.1■□□□□ 0.17
MTHFD1-207ENST00000554677 IBTKQ9P2D0 1353 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms