RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 RNF144AP50876 292 aaPredicted RBP9.71□□□□□ -0.86
KTN1-213ENST00000554306 LYSMD3Q7Z3D4 306 aa9.71□□□□□ -0.86
KTN1-213ENST00000554306 ABCC3O15438 1527 aa9.71□□□□□ -0.86
KTN1-213ENST00000554306 E9PCH4 1651 aa9.71□□□□□ -0.86
KTN1-213ENST00000554306 LORP23490 312 aaPredicted RBP9.7□□□□□ -0.86
KTN1-213ENST00000554306 CYP2U1Q7Z449 544 aa9.7□□□□□ -0.86
KTN1-213ENST00000554306 TBC1D2BQ9UPU7 963 aa9.7□□□□□ -0.86
KTN1-213ENST00000554306 PCDHB11Q9Y5F2 797 aa9.7□□□□□ -0.86
KTN1-213ENST00000554306 CNTLNQ9NXG0 1405 aa9.7□□□□□ -0.86
KTN1-213ENST00000554306 LMTK2Q8IWU2 1503 aa9.7□□□□□ -0.86
KTN1-213ENST00000554306 MROH2AA6NES4 1674 aa9.69□□□□□ -0.86
KTN1-213ENST00000554306 ITGA6P23229 1130 aa9.69□□□□□ -0.86
KTN1-213ENST00000554306 GPC1P35052 558 aa9.69□□□□□ -0.86
KTN1-213ENST00000554306 EFCAB6Q5THR3 1501 aa9.68□□□□□ -0.86
KTN1-213ENST00000554306 CLSPNQ9HAW4 1339 aa9.68□□□□□ -0.86
KTN1-213ENST00000554306 EIF4G2P78344 907 aaKnown RBP eCLIP9.68□□□□□ -0.86
KTN1-213ENST00000554306 SPHKAPQ2M3C7 1700 aa9.68□□□□□ -0.86
KTN1-213ENST00000554306 RPRD2Q5VT52 1461 aaKnown RBP9.67□□□□□ -0.86
KTN1-213ENST00000554306 CEP126Q9P2H0 1117 aa9.67□□□□□ -0.86
KTN1-213ENST00000554306 ADAMTSL3P82987 1691 aa9.67□□□□□ -0.86
KTN1-213ENST00000554306 RIMS1Q86UR5 1692 aaKnown RBP9.67□□□□□ -0.86
KTN1-213ENST00000554306 MADDQ8WXG6 1647 aa9.67□□□□□ -0.86
KTN1-213ENST00000554306 SENP3-EIF4A1A0A087X0R7 540 aa9.66□□□□□ -0.86
KTN1-213ENST00000554306 A0A1W2PRU2 124 aa9.66□□□□□ -0.86
KTN1-213ENST00000554306 MEN1O00255 615 aa9.66□□□□□ -0.86
KTN1-213ENST00000554306 NLRP3Q96P20 1036 aa9.66□□□□□ -0.86
KTN1-213ENST00000554306 ARHGAP31Q2M1Z3 1444 aa9.65□□□□□ -0.86
KTN1-213ENST00000554306 ZMYM3Q14202 1370 aa9.65□□□□□ -0.86
KTN1-213ENST00000554306 C3P01024 1663 aa9.65□□□□□ -0.86
KTN1-213ENST00000554306 PREX1Q8TCU6 1659 aa9.65□□□□□ -0.86
KTN1-213ENST00000554306 TRAK2O60296 914 aa9.65□□□□□ -0.86
KTN1-213ENST00000554306 SCTRP47872 440 aa9.65□□□□□ -0.86
KTN1-213ENST00000554306 SV2AQ7L0J3 742 aa9.65□□□□□ -0.86
KTN1-213ENST00000554306 GPR161Q8N6U8 529 aaKnown RBP9.65□□□□□ -0.86
KTN1-213ENST00000554306 MYCP01106 439 aaPredicted RBP9.64□□□□□ -0.87
KTN1-213ENST00000554306 NEUROD1Q13562 356 aa9.64□□□□□ -0.87
KTN1-213ENST00000554306 PRICKLE2Q7Z3G6 844 aa9.64□□□□□ -0.87
KTN1-213ENST00000554306 OSBPL3Q9H4L5 887 aa9.64□□□□□ -0.87
KTN1-213ENST00000554306 NPATQ14207 1427 aa9.64□□□□□ -0.87
KTN1-213ENST00000554306 ANKRD30BQ9BXX2 1392 aa9.63□□□□□ -0.87
KTN1-213ENST00000554306 KIF1BO60333 1816 aa9.63□□□□□ -0.87
KTN1-213ENST00000554306 CDC14CA4D256 554 aa9.63□□□□□ -0.87
KTN1-213ENST00000554306 CLN3Q13286 438 aa9.63□□□□□ -0.87
KTN1-213ENST00000554306 IRF5Q13568 498 aa9.63□□□□□ -0.87
KTN1-213ENST00000554306 VWA5B2Q8N398 1253 aa9.63□□□□□ -0.87
KTN1-213ENST00000554306 COL25A1Q9BXS0 654 aaPredicted RBP9.63□□□□□ -0.87
KTN1-213ENST00000554306 GNRH1P01148 92 aa9.62□□□□□ -0.87
KTN1-213ENST00000554306 WASHC4Q2M389 1173 aa9.62□□□□□ -0.87
KTN1-213ENST00000554306 SLC27A3Q5K4L6 730 aa9.62□□□□□ -0.87
KTN1-213ENST00000554306 CNTNAP3BQ96NU0 1288 aa9.62□□□□□ -0.87
KTN1-213ENST00000554306 SIN3AQ96ST3 1273 aa9.62□□□□□ -0.87
KTN1-213ENST00000554306 CNTNAP3Q9BZ76 1288 aa9.62□□□□□ -0.87
KTN1-213ENST00000554306 CCDC144AA2RUR9 1427 aa9.62□□□□□ -0.87
KTN1-213ENST00000554306 TRPM2O94759 1503 aa9.61□□□□□ -0.87
KTN1-213ENST00000554306 ZEB1P37275 1124 aaPredicted RBP9.61□□□□□ -0.87
KTN1-213ENST00000554306 SLFNL1Q499Z3 407 aa9.61□□□□□ -0.87
KTN1-213ENST00000554306 GMCL1Q96IK5 515 aa9.61□□□□□ -0.87
KTN1-213ENST00000554306 CCDC85AQ96PX6 553 aaPredicted RBP9.61□□□□□ -0.87
KTN1-213ENST00000554306 GDPD2Q9HCC8 539 aa9.61□□□□□ -0.87
KTN1-213ENST00000554306 ARHGEF10LQ9HCE6 1279 aa9.61□□□□□ -0.87
KTN1-213ENST00000554306 PTPRTO14522 1441 aa9.61□□□□□ -0.87
KTN1-213ENST00000554306 ERVK-7P63135 1459 aa9.6□□□□□ -0.87
KTN1-213ENST00000554306 SPATA31D1Q6ZQQ2 1576 aa9.6□□□□□ -0.87
KTN1-213ENST00000554306 NOS1P29475 1434 aa9.6□□□□□ -0.87
KTN1-213ENST00000554306 RHOQP17081 205 aa9.6□□□□□ -0.87
KTN1-213ENST00000554306 CEBPAP49715 358 aaPredicted RBP9.6□□□□□ -0.87
KTN1-213ENST00000554306 KRT76Q01546 638 aa9.6□□□□□ -0.87
KTN1-213ENST00000554306 MCM6Q14566 821 aa9.6□□□□□ -0.87
KTN1-213ENST00000554306 GRIP2Q9C0E4 1043 aa9.6□□□□□ -0.87
KTN1-213ENST00000554306 SLC52A1Q9NWF4 448 aa9.6□□□□□ -0.87
KTN1-213ENST00000554306 SETD1BQ9UPS6 1966 aaKnown RBP9.59□□□□□ -0.87
KTN1-213ENST00000554306 ABL2P42684 1182 aa9.59□□□□□ -0.87
KTN1-213ENST00000554306 VAC14Q08AM6 782 aa9.59□□□□□ -0.87
KTN1-213ENST00000554306 DOLKQ9UPQ8 538 aa9.59□□□□□ -0.87
KTN1-213ENST00000554306 CLTCL1P53675 1640 aa9.59□□□□□ -0.87
KTN1-213ENST00000554306 TNRQ92752 1358 aa9.59□□□□□ -0.87
KTN1-213ENST00000554306 TONSLQ96HA7 1378 aa9.59□□□□□ -0.87
KTN1-213ENST00000554306 PLA2R1Q13018 1463 aa9.59□□□□□ -0.87
KTN1-213ENST00000554306 SYNMO15061 1565 aa9.58□□□□□ -0.88
KTN1-213ENST00000554306 USP4Q13107 963 aa9.58□□□□□ -0.88
KTN1-213ENST00000554306 WDR44Q5JSH3 913 aa9.58□□□□□ -0.88
KTN1-213ENST00000554306 RNF135Q8IUD6 432 aa9.58□□□□□ -0.88
KTN1-213ENST00000554306 PHTF2Q8N3S3 785 aa9.58□□□□□ -0.88
KTN1-213ENST00000554306 CDCA7Q9BWT1 371 aaPredicted RBP9.58□□□□□ -0.88
KTN1-213ENST00000554306 DYRK1BQ9Y463 629 aa9.58□□□□□ -0.88
KTN1-213ENST00000554306 PTPRMP28827 1452 aa9.58□□□□□ -0.88
KTN1-213ENST00000554306 PIK3C2BO00750 1634 aa9.57□□□□□ -0.88
KTN1-213ENST00000554306 SPATA31C2B4DYI2 1134 aa9.57□□□□□ -0.88
KTN1-213ENST00000554306 SOX11P35716 441 aa9.57□□□□□ -0.88
KTN1-213ENST00000554306 CNKSR1Q969H4 720 aa9.57□□□□□ -0.88
KTN1-213ENST00000554306 SIRT1Q96EB6 747 aa9.57□□□□□ -0.88
KTN1-213ENST00000554306 ESYT1Q9BSJ8 1104 aa9.57□□□□□ -0.88
KTN1-213ENST00000554306 TIMELESSQ9UNS1 1208 aa9.57□□□□□ -0.88
KTN1-213ENST00000554306 UGGT1Q9NYU2 1555 aa9.56□□□□□ -0.88
KTN1-213ENST00000554306 POU4F2Q12837 409 aa9.56□□□□□ -0.88
KTN1-213ENST00000554306 IDI1Q13907 227 aa9.56□□□□□ -0.88
KTN1-213ENST00000554306 RGL3Q3MIN7 710 aa9.56□□□□□ -0.88
KTN1-213ENST00000554306 ZNF326Q5BKZ1 582 aaKnown RBP9.56□□□□□ -0.88
KTN1-213ENST00000554306 ESCO1Q5FWF5 840 aa9.56□□□□□ -0.88
KTN1-213ENST00000554306 RNFT1Q5M7Z0 435 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms