RNA–Protein interactions for RNA: ENST00000553614.5

HNRNPC-207, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-207ENST00000553614 KIF7Q2M1P5 1343 aa12.19□□□□□ -0.46
HNRNPC-207ENST00000553614 GNAT3A8MTJ3 354 aa12.19□□□□□ -0.46
HNRNPC-207ENST00000553614 CAMTA2O94983 1202 aa12.19□□□□□ -0.46
HNRNPC-207ENST00000553614 SRGNP10124 158 aa12.19□□□□□ -0.46
HNRNPC-207ENST00000553614 STYK1Q6J9G0 422 aa12.19□□□□□ -0.46
HNRNPC-207ENST00000553614 PRPF40BQ6NWY9 871 aaKnown RBP12.19□□□□□ -0.46
HNRNPC-207ENST00000553614 CNKSR1Q969H4 720 aa12.19□□□□□ -0.46
HNRNPC-207ENST00000553614 U2SURPO15042 1029 aaKnown RBP12.18□□□□□ -0.46
HNRNPC-207ENST00000553614 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
HNRNPC-207ENST00000553614 ST5P78524 1137 aa12.18□□□□□ -0.46
HNRNPC-207ENST00000553614 NPM2Q86SE8 214 aaKnown RBP12.18□□□□□ -0.46
HNRNPC-207ENST00000553614 GAS2L2Q8NHY3 880 aa12.18□□□□□ -0.46
HNRNPC-207ENST00000553614 FMNL2Q96PY5 1086 aa12.18□□□□□ -0.46
HNRNPC-207ENST00000553614 SCN4AP35499 1836 aa12.17□□□□□ -0.46
HNRNPC-207ENST00000553614 KCNQ3O43525 872 aa12.17□□□□□ -0.46
HNRNPC-207ENST00000553614 CNGB1Q14028 1251 aaPredicted RBP12.17□□□□□ -0.46
HNRNPC-207ENST00000553614 SOGA3Q5TF21 947 aa12.17□□□□□ -0.46
HNRNPC-207ENST00000553614 DZIP3Q86Y13 1208 aaKnown RBP12.17□□□□□ -0.46
HNRNPC-207ENST00000553614 MASTLQ96GX5 879 aa12.17□□□□□ -0.46
HNRNPC-207ENST00000553614 COL3A1P02461 1466 aaPredicted RBP12.16□□□□□ -0.46
HNRNPC-207ENST00000553614 IQCA1LA6NCM1 817 aa12.16□□□□□ -0.46
HNRNPC-207ENST00000553614 PIP4K2AP48426 406 aaPredicted RBP12.16□□□□□ -0.46
HNRNPC-207ENST00000553614 DLG5Q8TDM6 1919 aa12.15□□□□□ -0.46
HNRNPC-207ENST00000553614 PASKQ96RG2 1323 aa12.15□□□□□ -0.46
HNRNPC-207ENST00000553614 BTBD11A6QL63 1104 aa12.15□□□□□ -0.46
HNRNPC-207ENST00000553614 LDHDQ86WU2 507 aa12.15□□□□□ -0.46
HNRNPC-207ENST00000553614 NBPF5PQ86XG9 351 aaPredicted RBP12.15□□□□□ -0.46
HNRNPC-207ENST00000553614 C7orf43Q8WVR3 580 aa12.15□□□□□ -0.46
HNRNPC-207ENST00000553614 TAF1DQ9H5J8 278 aaPredicted RBP12.15□□□□□ -0.46
HNRNPC-207ENST00000553614 USP16Q9Y5T5 823 aa12.15□□□□□ -0.46
HNRNPC-207ENST00000553614 CNTNAP1P78357 1384 aa12.15□□□□□ -0.46
HNRNPC-207ENST00000553614 CEMIPQ8WUJ3 1361 aa12.15□□□□□ -0.46
HNRNPC-207ENST00000553614 ADAMTSL1Q8N6G6 1762 aa12.15□□□□□ -0.46
HNRNPC-207ENST00000553614 NUP98P52948 1817 aa12.14□□□□□ -0.47
HNRNPC-207ENST00000553614 PRAMEF22A3QJZ6 481 aa12.14□□□□□ -0.47
HNRNPC-207ENST00000553614 FOXN1O15353 648 aa12.14□□□□□ -0.47
HNRNPC-207ENST00000553614 CCDC93Q567U6 631 aa12.14□□□□□ -0.47
HNRNPC-207ENST00000553614 L3MBTL3Q96JM7 780 aaPredicted RBP12.14□□□□□ -0.47
HNRNPC-207ENST00000553614 PHACTR3Q96KR7 559 aa12.14□□□□□ -0.47
HNRNPC-207ENST00000553614 ZNF541Q9H0D2 1346 aa12.13□□□□□ -0.47
HNRNPC-207ENST00000553614 NPR1P16066 1061 aa12.13□□□□□ -0.47
HNRNPC-207ENST00000553614 EAPPQ56P03 285 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-207ENST00000553614 OLFM4Q6UX06 510 aa12.13□□□□□ -0.47
HNRNPC-207ENST00000553614 CLEC4GQ6UXB4 293 aa12.13□□□□□ -0.47
HNRNPC-207ENST00000553614 ZNF277Q9NRM2 450 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-207ENST00000553614 TMEM88BA6NKF7 163 aa12.12□□□□□ -0.47
HNRNPC-207ENST00000553614 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-207ENST00000553614 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
HNRNPC-207ENST00000553614 VEGFBP49765 207 aa12.12□□□□□ -0.47
HNRNPC-207ENST00000553614 CCER1Q8TC90 406 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-207ENST00000553614 ZNF652Q9Y2D9 606 aa12.12□□□□□ -0.47
HNRNPC-207ENST00000553614 TRPM7Q96QT4 1865 aa12.12□□□□□ -0.47
HNRNPC-207ENST00000553614 KLRG2A4D1S0 409 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-207ENST00000553614 SNRPA1P09661 255 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-207ENST00000553614 FKBP4Q02790 459 aaKnown RBP eCLIP12.11□□□□□ -0.47
HNRNPC-207ENST00000553614 TPTE2Q6XPS3 522 aa12.11□□□□□ -0.47
HNRNPC-207ENST00000553614 AIDAQ96BJ3 306 aa12.11□□□□□ -0.47
HNRNPC-207ENST00000553614 PRDM10Q9NQV6 1147 aa12.11□□□□□ -0.47
HNRNPC-207ENST00000553614 HACL1Q9UJ83 578 aa12.11□□□□□ -0.47
HNRNPC-207ENST00000553614 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
HNRNPC-207ENST00000553614 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
HNRNPC-207ENST00000553614 LTBP1Q14766 1721 aa12.11□□□□□ -0.47
HNRNPC-207ENST00000553614 TNRC18O15417 2968 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-207ENST00000553614 NPC1L1Q9UHC9 1359 aa12.1□□□□□ -0.47
HNRNPC-207ENST00000553614 FAM177BA6PVY3 158 aa12.1□□□□□ -0.47
HNRNPC-207ENST00000553614 NBPF26B4DH59 902 aa12.1□□□□□ -0.47
HNRNPC-207ENST00000553614 EPHX2P34913 555 aa12.1□□□□□ -0.47
HNRNPC-207ENST00000553614 CTCFP49711 727 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-207ENST00000553614 NBPF10Q6P3W6 841 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-207ENST00000553614 MCM10Q7L590 875 aa12.1□□□□□ -0.47
HNRNPC-207ENST00000553614 RTKN2Q8IZC4 609 aa12.1□□□□□ -0.47
HNRNPC-207ENST00000553614 NBPF15Q8N660 670 aa12.1□□□□□ -0.47
HNRNPC-207ENST00000553614 RSPH6AQ9H0K4 717 aa12.1□□□□□ -0.47
HNRNPC-207ENST00000553614 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
HNRNPC-207ENST00000553614 RNF123Q5XPI4 1314 aa12.1□□□□□ -0.47
HNRNPC-207ENST00000553614 MAP1SQ66K74 1059 aaPredicted RBP12.09□□□□□ -0.47
HNRNPC-207ENST00000553614 WBP1LQ9NX94 342 aa12.09□□□□□ -0.47
HNRNPC-207ENST00000553614 LAMB4A4D0S4 1761 aa12.09□□□□□ -0.47
HNRNPC-207ENST00000553614 COL4A5P29400 1685 aa12.09□□□□□ -0.47
HNRNPC-207ENST00000553614 TAF1P21675 1872 aa12.08□□□□□ -0.48
HNRNPC-207ENST00000553614 FZD9O00144 591 aa12.08□□□□□ -0.48
HNRNPC-207ENST00000553614 IARSP41252 1262 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-207ENST00000553614 LBX1P52954 281 aa12.08□□□□□ -0.48
HNRNPC-207ENST00000553614 HLFQ16534 295 aa12.08□□□□□ -0.48
HNRNPC-207ENST00000553614 PNMA8AQ86V59 439 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-207ENST00000553614 CNTROBQ8N137 903 aa12.08□□□□□ -0.48
HNRNPC-207ENST00000553614 SYNE4Q8N205 404 aa12.08□□□□□ -0.48
HNRNPC-207ENST00000553614 RTF1Q92541 710 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-207ENST00000553614 POLR2AP24928 1970 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-207ENST00000553614 CASP8AP2Q9UKL3 1982 aa12.07□□□□□ -0.48
HNRNPC-207ENST00000553614 RGL2O15211 777 aa12.07□□□□□ -0.48
HNRNPC-207ENST00000553614 GTF2E1P29083 439 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-207ENST00000553614 ALDH1B1P30837 517 aa12.07□□□□□ -0.48
HNRNPC-207ENST00000553614 DCTN1Q14203 1278 aa12.07□□□□□ -0.48
HNRNPC-207ENST00000553614 SLC51AQ86UW1 340 aa12.07□□□□□ -0.48
HNRNPC-207ENST00000553614 GPC2Q8N158 579 aa12.07□□□□□ -0.48
HNRNPC-207ENST00000553614 CFAP53Q96M91 514 aa12.07□□□□□ -0.48
HNRNPC-207ENST00000553614 LAMB2P55268 1798 aa12.06□□□□□ -0.48
HNRNPC-207ENST00000553614 RASSF10A6NK89 507 aa12.06□□□□□ -0.48
HNRNPC-207ENST00000553614 U2AF1L5P0DN76 240 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 314.4 ms