RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 CLIP2Q9UDT6 1046 aa13.48□□□□□ -0.25
NRDE2-202ENST00000553409 ZNF215Q9UL58 517 aaPredicted RBP13.48□□□□□ -0.25
NRDE2-202ENST00000553409 CPS1P31327 1500 aa13.48□□□□□ -0.25
NRDE2-202ENST00000553409 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
NRDE2-202ENST00000553409 USP44Q9H0E7 712 aa13.48□□□□□ -0.25
NRDE2-202ENST00000553409 ALKQ9UM73 1620 aa13.48□□□□□ -0.25
NRDE2-202ENST00000553409 USP27XA6NNY8 438 aa13.48□□□□□ -0.25
NRDE2-202ENST00000553409 PTH1RQ03431 593 aa13.48□□□□□ -0.25
NRDE2-202ENST00000553409 VPS53Q5VIR6 699 aa13.48□□□□□ -0.25
NRDE2-202ENST00000553409 KCNJ4P48050 445 aa13.47□□□□□ -0.25
NRDE2-202ENST00000553409 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.47□□□□□ -0.25
NRDE2-202ENST00000553409 CNTROBQ8N137 903 aa13.47□□□□□ -0.25
NRDE2-202ENST00000553409 TDRD7Q8NHU6 1098 aaKnown RBP13.47□□□□□ -0.25
NRDE2-202ENST00000553409 RHPN1Q8TCX5 695 aa13.47□□□□□ -0.25
NRDE2-202ENST00000553409 DNAJC25Q9H1X3 360 aa13.47□□□□□ -0.25
NRDE2-202ENST00000553409 TFIP11Q9UBB9 837 aaKnown RBP13.47□□□□□ -0.25
NRDE2-202ENST00000553409 MYO5BQ9ULV0 1848 aa13.47□□□□□ -0.25
NRDE2-202ENST00000553409 WASLO00401 505 aaPredicted RBP13.47□□□□□ -0.25
NRDE2-202ENST00000553409 ZNF165P49910 485 aa13.47□□□□□ -0.25
NRDE2-202ENST00000553409 ARID5BQ14865 1188 aa13.47□□□□□ -0.25
NRDE2-202ENST00000553409 PRPF40BQ6NWY9 871 aaKnown RBP13.47□□□□□ -0.25
NRDE2-202ENST00000553409 SSH3Q8TE77 659 aa13.47□□□□□ -0.25
NRDE2-202ENST00000553409 SH2B1Q9NRF2 756 aaPredicted RBP13.47□□□□□ -0.25
NRDE2-202ENST00000553409 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.25
NRDE2-202ENST00000553409 ZNF397Q8NF99 534 aaPredicted RBP13.46□□□□□ -0.25
NRDE2-202ENST00000553409 ZSCAN31Q96LW9 406 aaPredicted RBP13.46□□□□□ -0.25
NRDE2-202ENST00000553409 ELP1O95163 1332 aa13.46□□□□□ -0.25
NRDE2-202ENST00000553409 VGLL3A8MV65 326 aa13.46□□□□□ -0.25
NRDE2-202ENST00000553409 RAPGEF3O95398 923 aa13.46□□□□□ -0.25
NRDE2-202ENST00000553409 GOLGA6L4A6NEF3 574 aa13.46□□□□□ -0.26
NRDE2-202ENST00000553409 UBTFL1P0CB47 393 aaPredicted RBP13.46□□□□□ -0.26
NRDE2-202ENST00000553409 PPP1R42Q7Z4L9 355 aa13.46□□□□□ -0.26
NRDE2-202ENST00000553409 NUDT16Q96DE0 195 aaKnown RBP13.46□□□□□ -0.26
NRDE2-202ENST00000553409 ZSWIM6Q9HCJ5 1215 aa13.46□□□□□ -0.26
NRDE2-202ENST00000553409 CYP46A1Q9Y6A2 500 aa13.46□□□□□ -0.26
NRDE2-202ENST00000553409 COL9A3Q14050 684 aaPredicted RBP13.45□□□□□ -0.26
NRDE2-202ENST00000553409 FBXO31Q5XUX0 539 aaPredicted RBP13.45□□□□□ -0.26
NRDE2-202ENST00000553409 ST7Q9NRC1 585 aa13.45□□□□□ -0.26
NRDE2-202ENST00000553409 TPCN1Q9ULQ1 816 aa13.45□□□□□ -0.26
NRDE2-202ENST00000553409 RBM6P78332 1123 aaKnown RBP13.45□□□□□ -0.26
NRDE2-202ENST00000553409 IRX5P78411 483 aaPredicted RBP13.45□□□□□ -0.26
NRDE2-202ENST00000553409 MTHFSDQ2M296 383 aaKnown RBP13.45□□□□□ -0.26
NRDE2-202ENST00000553409 FBXO38Q6PIJ6 1188 aa13.45□□□□□ -0.26
NRDE2-202ENST00000553409 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
NRDE2-202ENST00000553409 ERICH4A6NGS2 130 aa13.45□□□□□ -0.26
NRDE2-202ENST00000553409 NR1I2O75469 434 aa13.45□□□□□ -0.26
NRDE2-202ENST00000553409 RBM43Q6ZSC3 357 aaKnown RBP13.45□□□□□ -0.26
NRDE2-202ENST00000553409 CLSTN2Q9H4D0 955 aa13.45□□□□□ -0.26
NRDE2-202ENST00000553409 TTC21AQ8NDW8 1320 aa13.44□□□□□ -0.26
NRDE2-202ENST00000553409 CCDC66A2RUB6 948 aa13.44□□□□□ -0.26
NRDE2-202ENST00000553409 RAB11FIP3O75154 756 aa13.44□□□□□ -0.26
NRDE2-202ENST00000553409 ELF2Q15723 593 aa13.44□□□□□ -0.26
NRDE2-202ENST00000553409 SPATA32Q96LK8 384 aa13.44□□□□□ -0.26
NRDE2-202ENST00000553409 DDX19AQ9NUU7 478 aaKnown RBP13.44□□□□□ -0.26
NRDE2-202ENST00000553409 FAM53CQ9NYF3 392 aa13.44□□□□□ -0.26
NRDE2-202ENST00000553409 TMEM131LA2VDJ0 1609 aa13.44□□□□□ -0.26
NRDE2-202ENST00000553409 STAG3Q9UJ98 1225 aa13.44□□□□□ -0.26
NRDE2-202ENST00000553409 ARHGEF10O15013 1369 aa13.44□□□□□ -0.26
NRDE2-202ENST00000553409 PTPN14Q15678 1187 aa13.44□□□□□ -0.26
NRDE2-202ENST00000553409 CCDC61Q9Y6R9 512 aa13.44□□□□□ -0.26
NRDE2-202ENST00000553409 PREX1Q8TCU6 1659 aa13.43□□□□□ -0.26
NRDE2-202ENST00000553409 CCDC30Q5VVM6 783 aa13.43□□□□□ -0.26
NRDE2-202ENST00000553409 NYAP1Q6ZVC0 841 aa13.43□□□□□ -0.26
NRDE2-202ENST00000553409 LEO1Q8WVC0 666 aaPredicted RBP13.43□□□□□ -0.26
NRDE2-202ENST00000553409 TRMT1Q9NXH9 659 aaKnown RBP13.43□□□□□ -0.26
NRDE2-202ENST00000553409 NPHP3Q7Z494 1330 aa13.43□□□□□ -0.26
NRDE2-202ENST00000553409 KIF1BPQ96EK5 621 aa13.43□□□□□ -0.26
NRDE2-202ENST00000553409 TM6SF1Q9BZW5 370 aa13.43□□□□□ -0.26
NRDE2-202ENST00000553409 SCAND2PQ9GZW5 306 aaPredicted RBP13.43□□□□□ -0.26
NRDE2-202ENST00000553409 NPHP1O15259 732 aa13.42□□□□□ -0.26
NRDE2-202ENST00000553409 SOX12O15370 315 aa13.42□□□□□ -0.26
NRDE2-202ENST00000553409 SRGAP3O43295 1099 aa13.42□□□□□ -0.26
NRDE2-202ENST00000553409 PGBD1Q96JS3 809 aa13.42□□□□□ -0.26
NRDE2-202ENST00000553409 CCDC171Q6TFL3 1326 aa13.42□□□□□ -0.26
NRDE2-202ENST00000553409 SKILP12757 684 aa13.42□□□□□ -0.26
NRDE2-202ENST00000553409 TIGD1Q96MW7 591 aa13.42□□□□□ -0.26
NRDE2-202ENST00000553409 MAP3K19Q56UN5 1328 aa13.42□□□□□ -0.26
NRDE2-202ENST00000553409 POLA2Q14181 598 aa13.42□□□□□ -0.26
NRDE2-202ENST00000553409 BICD2Q8TD16 824 aa13.42□□□□□ -0.26
NRDE2-202ENST00000553409 TCEANC2Q96MN5 208 aa13.42□□□□□ -0.26
NRDE2-202ENST00000553409 ERBB3P21860 1342 aa13.42□□□□□ -0.26
NRDE2-202ENST00000553409 CDK11BP21127 795 aaKnown RBP13.41□□□□□ -0.26
NRDE2-202ENST00000553409 CDC25BP30305 580 aa13.41□□□□□ -0.26
NRDE2-202ENST00000553409 PDE4CQ08493 712 aa13.41□□□□□ -0.26
NRDE2-202ENST00000553409 LARP1Q6PKG0 1096 aaKnown RBP13.41□□□□□ -0.26
NRDE2-202ENST00000553409 ZNF446Q9NWS9 450 aa13.41□□□□□ -0.26
NRDE2-202ENST00000553409 USP16Q9Y5T5 823 aa13.41□□□□□ -0.26
NRDE2-202ENST00000553409 NECTIN1Q15223 517 aa13.41□□□□□ -0.26
NRDE2-202ENST00000553409 ERO1AQ96HE7 468 aa13.41□□□□□ -0.26
NRDE2-202ENST00000553409 PDCP20941 246 aa13.41□□□□□ -0.26
NRDE2-202ENST00000553409 IQCB1Q15051 598 aa13.41□□□□□ -0.26
NRDE2-202ENST00000553409 FILIP1Q7Z7B0 1213 aa13.41□□□□□ -0.26
NRDE2-202ENST00000553409 TXNDC2Q86VQ3 553 aa13.41□□□□□ -0.26
NRDE2-202ENST00000553409 RUFY2Q8WXA3 655 aa13.41□□□□□ -0.26
NRDE2-202ENST00000553409 KCNB2Q92953 911 aa13.41□□□□□ -0.26
NRDE2-202ENST00000553409 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
NRDE2-202ENST00000553409 PPP6R1Q9UPN7 881 aa13.41□□□□□ -0.26
NRDE2-202ENST00000553409 DLC1Q96QB1 1528 aa13.4□□□□□ -0.26
NRDE2-202ENST00000553409 GOLGA6L19H0YKK7 550 aa13.4□□□□□ -0.26
NRDE2-202ENST00000553409 ZKSCAN1P17029 563 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms