RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 SETDB2Q96T68 719 aa15.43■□□□□ 0.06
PRPF40B-212ENST00000551111 GLTPD2A6NH11 291 aa15.42■□□□□ 0.06
PRPF40B-212ENST00000551111 SNRPA1P09661 255 aaKnown RBP15.42■□□□□ 0.06
PRPF40B-212ENST00000551111 IFFO2Q5TF58 517 aa15.42■□□□□ 0.06
PRPF40B-212ENST00000551111 C16orf71Q8IYS4 520 aaPredicted RBP15.42■□□□□ 0.06
PRPF40B-212ENST00000551111 CNBD1Q8NA66 436 aa15.42■□□□□ 0.06
PRPF40B-212ENST00000551111 RTF1Q92541 710 aaKnown RBP15.42■□□□□ 0.06
PRPF40B-212ENST00000551111 PDE6BP35913 854 aa15.41■□□□□ 0.06
PRPF40B-212ENST00000551111 THUMPD2Q9BTF0 503 aaKnown RBP15.41■□□□□ 0.06
PRPF40B-212ENST00000551111 SRGNP10124 158 aa15.4■□□□□ 0.06
PRPF40B-212ENST00000551111 TAF7Q15545 349 aaPredicted RBP15.4■□□□□ 0.06
PRPF40B-212ENST00000551111 HLFQ16534 295 aa15.4■□□□□ 0.06
PRPF40B-212ENST00000551111 PLEKHF1Q96S99 279 aa15.4■□□□□ 0.06
PRPF40B-212ENST00000551111 FAM177BA6PVY3 158 aa15.39■□□□□ 0.05
PRPF40B-212ENST00000551111 FSTL1Q12841 308 aa15.39■□□□□ 0.05
PRPF40B-212ENST00000551111 PRPF40BQ6NWY9 871 aaKnown RBP15.39■□□□□ 0.05
PRPF40B-212ENST00000551111 OLFM4Q6UX06 510 aa15.39■□□□□ 0.05
PRPF40B-212ENST00000551111 HTATSF1O43719 755 aaKnown RBP15.38■□□□□ 0.05
PRPF40B-212ENST00000551111 NPM2Q86SE8 214 aaKnown RBP15.38■□□□□ 0.05
PRPF40B-212ENST00000551111 ZC3H4Q9UPT8 1303 aaKnown RBP15.38■□□□□ 0.05
PRPF40B-212ENST00000551111 NPHP1O15259 732 aa15.37■□□□□ 0.05
PRPF40B-212ENST00000551111 VEGFAP15692 232 aaPredicted RBP15.37■□□□□ 0.05
PRPF40B-212ENST00000551111 ST5P78524 1137 aa15.37■□□□□ 0.05
PRPF40B-212ENST00000551111 STYK1Q6J9G0 422 aa15.37■□□□□ 0.05
PRPF40B-212ENST00000551111 NBPF5PQ86XG9 351 aaPredicted RBP15.37■□□□□ 0.05
PRPF40B-212ENST00000551111 NGEFQ8N5V2 710 aa15.37■□□□□ 0.05
PRPF40B-212ENST00000551111 C7orf43Q8WVR3 580 aa15.37■□□□□ 0.05
PRPF40B-212ENST00000551111 ERFEQ4G0M1 354 aa15.36■□□□□ 0.05
PRPF40B-212ENST00000551111 CLEC4GQ6UXB4 293 aa15.36■□□□□ 0.05
PRPF40B-212ENST00000551111 KLRG1Q96E93 195 aa15.36■□□□□ 0.05
PRPF40B-212ENST00000551111 MASTLQ96GX5 879 aa15.36■□□□□ 0.05
PRPF40B-212ENST00000551111 PDZRN3Q9UPQ7 1066 aa15.36■□□□□ 0.05
PRPF40B-212ENST00000551111 NIP7Q9Y221 180 aaKnown RBP eCLIP15.36■□□□□ 0.05
PRPF40B-212ENST00000551111 POTEIP0CG38 1075 aa15.35■□□□□ 0.05
PRPF40B-212ENST00000551111 POTEJP0CG39 1038 aa15.35■□□□□ 0.05
PRPF40B-212ENST00000551111 EIF4A1P60842 406 aaKnown RBP15.35■□□□□ 0.05
PRPF40B-212ENST00000551111 TTLL7Q6ZT98 887 aa15.35■□□□□ 0.05
PRPF40B-212ENST00000551111 SLC51AQ86UW1 340 aa15.35■□□□□ 0.05
PRPF40B-212ENST00000551111 SMC1BQ8NDV3 1235 aa15.35■□□□□ 0.05
PRPF40B-212ENST00000551111 CNKSR1Q969H4 720 aa15.35■□□□□ 0.05
PRPF40B-212ENST00000551111 KLRG2A4D1S0 409 aaPredicted RBP15.34■□□□□ 0.05
PRPF40B-212ENST00000551111 DDNO94850 711 aaPredicted RBP15.34■□□□□ 0.05
PRPF40B-212ENST00000551111 NFE2L2Q16236 605 aa15.34■□□□□ 0.05
PRPF40B-212ENST00000551111 TAOK3Q9H2K8 898 aa15.34■□□□□ 0.05
PRPF40B-212ENST00000551111 RRP7AQ9Y3A4 280 aaKnown RBP15.34■□□□□ 0.05
PRPF40B-212ENST00000551111 LTBP3Q9NS15 1303 aa15.34■□□□□ 0.05
PRPF40B-212ENST00000551111 NUTM1Q86Y26 1132 aa15.33■□□□□ 0.04
PRPF40B-212ENST00000551111 ZNF652Q9Y2D9 606 aa15.33■□□□□ 0.04
PRPF40B-212ENST00000551111 ABCC12Q96J65 1359 aa15.33■□□□□ 0.04
PRPF40B-212ENST00000551111 TAF1P21675 1872 aa15.32■□□□□ 0.04
PRPF40B-212ENST00000551111 TPTE2Q6XPS3 522 aa15.32■□□□□ 0.04
PRPF40B-212ENST00000551111 JMYQ8N9B5 988 aa15.32■□□□□ 0.04
PRPF40B-212ENST00000551111 MYL6BP14649 208 aa15.31■□□□□ 0.04
PRPF40B-212ENST00000551111 NPR1P16066 1061 aa15.31■□□□□ 0.04
PRPF40B-212ENST00000551111 DPY19L2Q6NUT2 758 aa15.31■□□□□ 0.04
PRPF40B-212ENST00000551111 ZNF277Q9NRM2 450 aaPredicted RBP15.31■□□□□ 0.04
PRPF40B-212ENST00000551111 SCN4AP35499 1836 aa15.31■□□□□ 0.04
PRPF40B-212ENST00000551111 GPTP24298 496 aa15.3■□□□□ 0.04
PRPF40B-212ENST00000551111 LAMB2P55268 1798 aa15.3■□□□□ 0.04
PRPF40B-212ENST00000551111 UBN2Q6ZU65 1347 aa15.3■□□□□ 0.04
PRPF40B-212ENST00000551111 ZBTB3Q9H5J0 574 aa15.3■□□□□ 0.04
PRPF40B-212ENST00000551111 COL4A5P29400 1685 aa15.29■□□□□ 0.04
PRPF40B-212ENST00000551111 SNED1Q8TER0 1413 aa15.29■□□□□ 0.04
PRPF40B-212ENST00000551111 MAP3K15Q6ZN16 1313 aa15.29■□□□□ 0.04
PRPF40B-212ENST00000551111 ZNF541Q9H0D2 1346 aa15.29■□□□□ 0.04
PRPF40B-212ENST00000551111 ANXA1P04083 346 aa15.29■□□□□ 0.04
PRPF40B-212ENST00000551111 C3orf67Q6ZVT6 689 aa15.29■□□□□ 0.04
PRPF40B-212ENST00000551111 PROSER3Q2NL68 480 aa15.28■□□□□ 0.04
PRPF40B-212ENST00000551111 CCDC93Q567U6 631 aa15.28■□□□□ 0.04
PRPF40B-212ENST00000551111 COL13A1Q5TAT6 717 aaPredicted RBP15.28■□□□□ 0.04
PRPF40B-212ENST00000551111 SUSD4Q5VX71 490 aa15.28■□□□□ 0.04
PRPF40B-212ENST00000551111 LRP10Q7Z4F1 713 aa15.28■□□□□ 0.04
PRPF40B-212ENST00000551111 PNISRQ8TF01 805 aaKnown RBP15.28■□□□□ 0.04
PRPF40B-212ENST00000551111 ANKRD36CQ5JPF3 1778 aa15.27■□□□□ 0.04
PRPF40B-212ENST00000551111 ERVV-1B6SEH8 477 aa15.27■□□□□ 0.04
PRPF40B-212ENST00000551111 RGL2O15211 777 aa15.27■□□□□ 0.04
PRPF40B-212ENST00000551111 NEFMP07197 916 aa15.27■□□□□ 0.04
PRPF40B-212ENST00000551111 GTF2E1P29083 439 aaPredicted RBP15.27■□□□□ 0.04
PRPF40B-212ENST00000551111 FKBP4Q02790 459 aaKnown RBP eCLIP15.27■□□□□ 0.04
PRPF40B-212ENST00000551111 PDIA6Q15084 440 aa15.27■□□□□ 0.04
PRPF40B-212ENST00000551111 MAPK8IP3Q9UPT6 1336 aa15.26■□□□□ 0.03
PRPF40B-212ENST00000551111 RIPK4P57078 832 aa15.26■□□□□ 0.03
PRPF40B-212ENST00000551111 CRY2Q49AN0 593 aa15.26■□□□□ 0.03
PRPF40B-212ENST00000551111 SOGA3Q5TF21 947 aa15.26■□□□□ 0.03
PRPF40B-212ENST00000551111 ZNF34Q8IZ26 560 aa15.26■□□□□ 0.03
PRPF40B-212ENST00000551111 SYNE4Q8N205 404 aa15.26■□□□□ 0.03
PRPF40B-212ENST00000551111 TSPYL4Q9UJ04 414 aa15.26■□□□□ 0.03
PRPF40B-212ENST00000551111 LTBP1Q14766 1721 aa15.26■□□□□ 0.03
PRPF40B-212ENST00000551111 EIF2S2P20042 333 aaKnown RBP15.25■□□□□ 0.03
PRPF40B-212ENST00000551111 DDX10Q13206 875 aaKnown RBP15.25■□□□□ 0.03
PRPF40B-212ENST00000551111 KRT24Q2M2I5 525 aa15.25■□□□□ 0.03
PRPF40B-212ENST00000551111 CHADLQ6NUI6 762 aa15.25■□□□□ 0.03
PRPF40B-212ENST00000551111 CCDC146Q8IYE0 955 aa15.25■□□□□ 0.03
PRPF40B-212ENST00000551111 NECTIN2Q92692 538 aa15.25■□□□□ 0.03
PRPF40B-212ENST00000551111 ADAMTSL1Q8N6G6 1762 aa15.25■□□□□ 0.03
PRPF40B-212ENST00000551111 TCERG1O14776 1098 aaKnown RBP15.24■□□□□ 0.03
PRPF40B-212ENST00000551111 NTSR2O95665 410 aa15.24■□□□□ 0.03
PRPF40B-212ENST00000551111 TMPOP42166 694 aaKnown RBP15.24■□□□□ 0.03
PRPF40B-212ENST00000551111 KIF6Q6ZMV9 814 aa15.24■□□□□ 0.03
PRPF40B-212ENST00000551111 L3MBTL3Q96JM7 780 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms