RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 NFKBIBQ15653 356 aa25.77■■□□□ 1.72
PRDM4-205ENST00000550376 TMOD3Q9NYL9 352 aa25.77■■□□□ 1.72
PRDM4-205ENST00000550376 PIGBQ92521 554 aa25.76■■□□□ 1.71
PRDM4-205ENST00000550376 PARP4Q9UKK3 1724 aaKnown RBP25.76■■□□□ 1.71
PRDM4-205ENST00000550376 RAB11FIP3O75154 756 aa25.75■■□□□ 1.71
PRDM4-205ENST00000550376 SYTL4Q96C24 671 aaPredicted RBP25.75■■□□□ 1.71
PRDM4-205ENST00000550376 KIF1BPQ96EK5 621 aa25.75■■□□□ 1.71
PRDM4-205ENST00000550376 USP26Q9BXU7 913 aa25.75■■□□□ 1.71
PRDM4-205ENST00000550376 UBE3BQ7Z3V4 1068 aa25.74■■□□□ 1.71
PRDM4-205ENST00000550376 ZBTB3Q9H5J0 574 aa25.74■■□□□ 1.71
PRDM4-205ENST00000550376 MTX1Q13505 466 aa25.74■■□□□ 1.71
PRDM4-205ENST00000550376 STAP2Q9UGK3 403 aa25.73■■□□□ 1.71
PRDM4-205ENST00000550376 PLEKHG2Q9H7P9 1386 aa25.73■■□□□ 1.71
PRDM4-205ENST00000550376 A0A0G2JS52 829 aa25.72■■□□□ 1.71
PRDM4-205ENST00000550376 FRAT2O75474 233 aaPredicted RBP25.72■■□□□ 1.71
PRDM4-205ENST00000550376 CASC1Q6TDU7 716 aa25.72■■□□□ 1.71
PRDM4-205ENST00000550376 ARXQ96QS3 562 aa25.72■■□□□ 1.71
PRDM4-205ENST00000550376 UTYO14607 1347 aa25.71■■□□□ 1.71
PRDM4-205ENST00000550376 A0A087WZG4 1122 aa25.71■■□□□ 1.71
PRDM4-205ENST00000550376 HSCBQ8IWL3 235 aa25.71■■□□□ 1.71
PRDM4-205ENST00000550376 ANTXR1Q9H6X2 564 aa25.71■■□□□ 1.71
PRDM4-205ENST00000550376 FOXD4L1Q9NU39 408 aa25.71■■□□□ 1.71
PRDM4-205ENST00000550376 PLBD2Q8NHP8 589 aa25.7■■□□□ 1.7
PRDM4-205ENST00000550376 GLI3P10071 1580 aa25.7■■□□□ 1.7
PRDM4-205ENST00000550376 SHANK3Q9BYB0 1731 aa25.7■■□□□ 1.7
PRDM4-205ENST00000550376 DNAJC10Q8IXB1 793 aa25.69■■□□□ 1.7
PRDM4-205ENST00000550376 PI4K2BQ8TCG2 481 aa25.69■■□□□ 1.7
PRDM4-205ENST00000550376 IL25Q9H293 177 aa25.69■■□□□ 1.7
PRDM4-205ENST00000550376 ATG3Q9NT62 314 aa25.69■■□□□ 1.7
PRDM4-205ENST00000550376 SASH1O94885 1247 aa25.68■■□□□ 1.7
PRDM4-205ENST00000550376 KCPQ6ZWJ8 1503 aa25.68■■□□□ 1.7
PRDM4-205ENST00000550376 EXOC5O00471 708 aa25.67■■□□□ 1.7
PRDM4-205ENST00000550376 ERC2O15083 957 aa25.67■■□□□ 1.7
PRDM4-205ENST00000550376 CHMLP26374 656 aa25.67■■□□□ 1.7
PRDM4-205ENST00000550376 HSP90AB4PQ58FF6 505 aa25.67■■□□□ 1.7
PRDM4-205ENST00000550376 LTBP4Q8N2S1 1624 aa25.67■■□□□ 1.7
PRDM4-205ENST00000550376 CLASRPQ8N2M8 674 aaKnown RBP25.66■■□□□ 1.7
PRDM4-205ENST00000550376 CCDC8Q9H0W5 538 aaPredicted RBP25.66■■□□□ 1.7
PRDM4-205ENST00000550376 AACSQ86V21 672 aa25.66■■□□□ 1.7
PRDM4-205ENST00000550376 G3BP1Q13283 466 aaKnown RBP eCLIP25.65■■□□□ 1.7
PRDM4-205ENST00000550376 ESYT1Q9BSJ8 1104 aa25.64■■□□□ 1.7
PRDM4-205ENST00000550376 TLR7Q9NYK1 1049 aaKnown RBP25.64■■□□□ 1.7
PRDM4-205ENST00000550376 HDAC5Q9UQL6 1122 aa25.64■■□□□ 1.7
PRDM4-205ENST00000550376 CCDC9Q9Y3X0 531 aaKnown RBP25.64■■□□□ 1.7
PRDM4-205ENST00000550376 PRIM1P49642 420 aaKnown RBP25.64■■□□□ 1.69
PRDM4-205ENST00000550376 EAF2Q96CJ1 260 aaPredicted RBP25.64■■□□□ 1.69
PRDM4-205ENST00000550376 TOGARAM1Q9Y4F4 1720 aa25.64■■□□□ 1.69
PRDM4-205ENST00000550376 SLC4A9Q96Q91 983 aa25.63■■□□□ 1.69
PRDM4-205ENST00000550376 CHMP3Q9Y3E7 222 aa25.63■■□□□ 1.69
PRDM4-205ENST00000550376 IFIT2P09913 472 aaKnown RBP25.63■■□□□ 1.69
PRDM4-205ENST00000550376 REC8O95072 547 aa25.62■■□□□ 1.69
PRDM4-205ENST00000550376 ANO2Q9NQ90 1003 aa25.62■■□□□ 1.69
PRDM4-205ENST00000550376 ACSBG1Q96GR2 724 aa25.61■■□□□ 1.69
PRDM4-205ENST00000550376 COL16A1Q07092 1604 aaPredicted RBP25.61■■□□□ 1.69
PRDM4-205ENST00000550376 SNX21Q969T3 373 aa25.61■■□□□ 1.69
PRDM4-205ENST00000550376 LMBR1LQ6UX01 489 aa25.6■■□□□ 1.69
PRDM4-205ENST00000550376 DISP2A7MBM2 1401 aa25.6■■□□□ 1.69
PRDM4-205ENST00000550376 CASP7P55210 303 aa25.6■■□□□ 1.69
PRDM4-205ENST00000550376 TNS2Q63HR2 1409 aa25.6■■□□□ 1.69
PRDM4-205ENST00000550376 AHDC1Q5TGY3 1603 aaPredicted RBP25.59■■□□□ 1.69
PRDM4-205ENST00000550376 PTPN12Q05209 780 aaKnown RBP25.58■■□□□ 1.69
PRDM4-205ENST00000550376 COL14A1Q05707 1796 aaKnown RBP25.58■■□□□ 1.69
PRDM4-205ENST00000550376 ERBB4Q15303 1308 aa25.58■■□□□ 1.69
PRDM4-205ENST00000550376 PALD1Q9ULE6 856 aa25.58■■□□□ 1.69
PRDM4-205ENST00000550376 RFX5P48382 616 aaPredicted RBP25.57■■□□□ 1.68
PRDM4-205ENST00000550376 ERC1Q8IUD2 1116 aa25.57■■□□□ 1.68
PRDM4-205ENST00000550376 ECHDC1Q9NTX5 307 aa25.57■■□□□ 1.68
PRDM4-205ENST00000550376 CWC25Q9NXE8 425 aaPredicted RBP25.57■■□□□ 1.68
PRDM4-205ENST00000550376 AOX1Q06278 1338 aa25.57■■□□□ 1.68
PRDM4-205ENST00000550376 UBR2Q8IWV8 1755 aa25.57■■□□□ 1.68
PRDM4-205ENST00000550376 CWC27Q6UX04 472 aaKnown RBP25.56■■□□□ 1.68
PRDM4-205ENST00000550376 CCDC85AQ96PX6 553 aaPredicted RBP25.56■■□□□ 1.68
PRDM4-205ENST00000550376 ARFGEF2Q9Y6D5 1785 aa25.56■■□□□ 1.68
PRDM4-205ENST00000550376 H7C1W4 665 aa25.56■■□□□ 1.68
PRDM4-205ENST00000550376 SPATA31A1Q5TZJ5 1347 aa25.56■■□□□ 1.68
PRDM4-205ENST00000550376 HSP90AA1P07900 732 aaKnown RBP25.55■■□□□ 1.68
PRDM4-205ENST00000550376 DEKP35659 375 aaKnown RBP25.55■■□□□ 1.68
PRDM4-205ENST00000550376 FOXO4P98177 505 aa25.55■■□□□ 1.68
PRDM4-205ENST00000550376 TFCP2Q12800 502 aa25.55■■□□□ 1.68
PRDM4-205ENST00000550376 TOM1O60784 492 aa25.55■■□□□ 1.68
PRDM4-205ENST00000550376 DDB1Q16531 1140 aa25.55■■□□□ 1.68
PRDM4-205ENST00000550376 UBAP1LF5GYI3 381 aa25.54■■□□□ 1.68
PRDM4-205ENST00000550376 K7ELQ4 463 aaPredicted RBP25.54■■□□□ 1.68
PRDM4-205ENST00000550376 SYNE4Q8N205 404 aa25.54■■□□□ 1.68
PRDM4-205ENST00000550376 BOLA2Q9H3K6 86 aa25.54■■□□□ 1.68
PRDM4-205ENST00000550376 LAMB4A4D0S4 1761 aa25.54■■□□□ 1.68
PRDM4-205ENST00000550376 GLRX3O76003 335 aaKnown RBP25.54■■□□□ 1.68
PRDM4-205ENST00000550376 CNTROBQ8N137 903 aa25.54■■□□□ 1.68
PRDM4-205ENST00000550376 NDUFB9Q9Y6M9 179 aa25.54■■□□□ 1.68
PRDM4-205ENST00000550376 AFDNP55196 1824 aaKnown RBP25.54■■□□□ 1.68
PRDM4-205ENST00000550376 STARD3NLO95772 234 aa25.53■■□□□ 1.68
PRDM4-205ENST00000550376 RABEP1Q15276 862 aa25.53■■□□□ 1.68
PRDM4-205ENST00000550376 RABL6Q3YEC7 729 aaPredicted RBP25.53■■□□□ 1.68
PRDM4-205ENST00000550376 ZNF594Q96JF6 807 aaPredicted RBP25.53■■□□□ 1.68
PRDM4-205ENST00000550376 BCL9O00512 1426 aa25.53■■□□□ 1.68
PRDM4-205ENST00000550376 PHLPP1O60346 1717 aa25.53■■□□□ 1.68
PRDM4-205ENST00000550376 GPTP24298 496 aa25.53■■□□□ 1.68
PRDM4-205ENST00000550376 HLFQ16534 295 aa25.53■■□□□ 1.68
PRDM4-205ENST00000550376 TUBGCP6Q96RT7 1819 aa25.53■■□□□ 1.68
PRDM4-205ENST00000550376 TTC41PQ6P2S7 1318 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms